Os03g0278000

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Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0278000| Description = UDP-glucuronic acid decarboxylase| Version = NM_001056258.1 GI:115452244 GeneID:4332424| Length = 4094 bp| Definiti...")
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Gene Name

Os03g0278000

Description

UDP-glucuronic acid decarboxylase

Version

NM_001056258.1 GI:115452244 GeneID:4332424

Length

4094 bp

Definition

Oryza sativa Japonica Group Os03g0278000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9487146..9491239

Sequence Coding Region

9487837..9487932,9488031..9488117,9488787..9488874,9489428..9489519,9489625..9489689
,9489777..9489865,9489959..9490036,9490124..9490217,9490302..9490368
,9490464..9490527,9490653..9490693,9490778..9490969

Expression

GEO Profiles:Os03g0278000

Genome Context

<gbrowseImage1> name=NC_008396:9487146..9491239 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9487146..9491239 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcagaaggaggccaatggcagcagcaacggggagcacaccacccgcccgccgccgacgccctcgccgctccggttctccaagttcttccaggcgaacctgaggatcctcgtcaccggcggagctggcttcatcggctcgcacctcgtcgacaagctcatggagaacgagaagcacgaggtcattgtcgcagacaactttttcactggttcaaaagacaacctgaagaagtggatcggacacccaagatttgagctaatccgtcatgatgtcacccagcccctgcttgtggaggttgaccaaatctatcaccttgcttgccctgcttcaccaatcttctacaagcacaaccctgtcaagaccatcaagacaaacgttatcggaaccctgaacatgcttggacttgccaagagagttggagctaggattttgttgacttcgacctctgaagtttacggtgatccgcttgagcaccctcaaacagaggcctactggggaaatgttaacccaattggagtcaggagttgctatgacgagggtaagcgtgtcgcagaaacactgatgtttgactatcacaggcagcatggcattgagatccgaattgccaggattttcaacacctatggacctaggatgaacattgatgatgggcgtgttgttagtaacttcattgctcaggccgtacgtggcgagcccctgactgttcagaagccaggaacacaaactaggagcttctgctatgttgctgacatggttaatggtcttattaagctgatgaacggggacaacactggaccaattaatttgggaaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagaggttaccgtcacaatgactgagaacactcctgatgatcctcgtcagaggaagccagacattacaaaggcaaaggaagttttggggtgggagcccaagatcgttctgcgtgatggcttggtgctcatggaagatgatttccgggagcgcctccaagtgcccaagaagaaccaggcctaa</cdnaseq>

Protein Sequence

<aaseq>MAQKEANGSSNGEHTTRPPPTPSPLRFSKFFQANLRILVTGGAG FIGSHLVDKLMENEKHEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTQPLLVEVDQ IYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHP QTEAYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG RVVSNFIAQAVRGEPLTVQKPGTQTRSFCYVADMVNGLIKLMNGDNTGPINLGNPGEF TMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLGWEPKIVLRDGLVLM EDDFRERLQVPKKNQA</aaseq>

Gene Sequence

<dnaseqindica>692..787#886..972#1642..1729#2283..2374#2480..2544#2632..2720#2814..2891#2979..3072#3157..3223#3319..3382#3508..3548#3633..3824#gggcgtccagatctcgggctcgctgagctgtcgccatcgacccggagtccctcccgcaccagctaacctttgcttccgttggaagcgccagccagcgctcgccgttgtcacctgtcacactgcgttgcacggattatcgtttttaattaatcgtcaccagattgttttttttctttctttttgcaaatctcgcttcgcttttggagtgggaggaattaattgtggagttgggtagatcgatcaggggcagcgcgagcgaggcccggttggtagcagtcggtgcgtgtttgtgcgtgtgcgcgctgcttctgcttgcatcgtggtgcgaggaggggagaggaggggtgctgctataaatacggctcagatctgggaggctttcttcctcgtccgcctccggtctaatccgattcaaacccgccgtttccaagcttgctctcctctcccccccaatccttccctcccgagtggcagggtgagcattccgccgctcccgtgtttttttttttgatccatctccgtggtggtggatcgcgatcgcgtgtgtggggttgaggggggtttcgattttgtggtttgggtggtgttggttttttttttttttttgggtgggggggggggaattgtgacgatctgagtgttggtgacggtggatctgtggcgtttttgtgcgtaccaggtgctcgacgggatggcgcagaaggaggccaatggcagcagcaacggggagcacaccacccgcccgccgccgacgccctcgccgctccggttctccaagttcttccaggtgattttgccgggatccgatcgctggatctcgccgtatacgtggcccgatcgctcgacctggtctgattgttcgtgggtgtttgtgtgtgtgtgcaggcgaacctgaggatcctcgtcaccggcggagctggcttcatcggctcgcacctcgtcgacaagctcatggagaacgagaagcacgaggtacggatgagatcctgtagtacgatccgtttcatttttgttcggcttgcttgtctattggggggtttgtggcattgacttgtgccggtcggtgaggtcaagctccgtccgttgtgaggaacagtagctagatctgagtgatctagttagggactgagggttcgagatctatatcagaaacggtaatgaatggagatgcttctgccagatctctggggtgcaagcttttctgctacgttttgcatggcgtggggttggggcatttatgtctgaaacttaagcttgaagcttctctcgagtctcactacctgagaatgttttccacaacgagagagatcatagatatcagtgtcaatgcttcagggatcttgctaggagtacttcattatatgccctgagctttagctttggatctgtttgagaatgtgagagttaatccaagatccagtagcaatgttgtagagatctcgctgctagtacttcatccatgataagcagagtaccatgctaaggcttgagatctttcttgcgcagtgcatatgcttcatattcacaagagtttgtactttgtagaactcaacaatgttgcattgttgccttgtgtgactgcttggcagatttttagctgagaaagtgcgggcctttgatcatgtgttcttttctgttcaggtcattgtcgcagacaactttttcactggttcaaaagacaacctgaagaagtggatcggacacccaagatttgagctaatccgtcatggtattgctacattctcagtgcatttagttcatgaactattgttacatactagtaataaagttttactgctagcaagttttttcgttcaaaatttgagaaacactatagatcttggttagtaaattacaaacaaagcaccgtattataattttggctttgagtcaatgcttacacaaatgcagtcttgagttgtctgttcaacagaatgtacggaatttctgcacttgtcattgaacctctcttagtcaagttcatctttctatcttattagattagattatgagtatgtttatgtgactttctattggtaaattctgttccaacttccaaacaaaagtgtatgctttcatgcttatatagttatatttatgacttatgaaaaagggtgtttggcccaaccatgaaaacaggctgatagatgttatcctgtgctcatcttgattctgtagtgtacttaagacactaaactttttttgcgatcagttctatcgtatcttcaaaagtatattattgtgagatattaaaattttgaccttttttttattcatttcagatgtcacccagcccctgcttgtggaggttgaccaaatctatcaccttgcttgccctgcttcaccaatcttctacaagcacaaccctgtcaaggtacagtctctattatatatataactctgttaagtccaactattcaaatacaaatcttgttcatgtcctgttctgatatttaaatggatgtataatcatgtacagaccatcaagacaaacgttatcggaaccctgaacatgcttggacttgccaagagagttggagctaggttggtgtttttttaatgctgattaacttgtcctatgcaacttatgagaactatataatgaagggaggtttttatgttgtactgcaggattttgttgacttcgacctctgaagtttacggtgatccgcttgagcaccctcaaacagaggcctactggggaaatgttaacccaattggtacgtctgttctatcacaaatacactacatttatcctatattttcttaatctagtgcaaagttcacttacttgaattgatttacttcatcaggagtcaggagttgctatgacgagggtaagcgtgtcgcagaaacactgatgtttgactatcacaggcagcatggcattggtaatatttttagttcatacctttttgtcttgtgatgtactggattgtagttctccttaataagtattttccaatctatctctgtagagatccgaattgccaggattttcaacacctatggacctaggatgaacattgatgatgggcgtgttgttagtaacttcattgctcaggccgtacggtaatgctcgctgaacttctttcaacattctctcaggttgtgtccagttggtcctggagcttattttcatacataattttacagtggcgagcccctgactgttcagaagccaggaacacaaactaggagcttctgctatgttgctgacatggtttgtcaccccttttgaaatgtcattaattaatagctggctgaaactttgatatatcattgcatcacatcatcactggtaccattttaatgcaggttaatggtcttattaagctgatgaacggggacaacactggaccaattaatttgggaaacccaggtagatttacctctgcattcgtttgatttttctctacatgtggtaatctgtactagcaatcctgtggtaatgaaattgattttcacgtccttgtcactaaatggtcataatatattgtgttgtaggtgaattcaccatgctggaacttgctgagaatgtgaaggaggtaagatgaatatcctgttgccgaacatcattccatgggatgtttctgaatggcatgctaagtttccctgcttttaccttgcagttgatcaacccagaggttaccgtcacaatgactgagaacactcctgatgatcctcgtcagaggaagccagacattacaaaggcaaaggaagttttggggtgggagcccaagatcgttctgcgtgatggcttggtgctcatggaagatgatttccgggagcgcctccaagtgcccaagaagaaccaggcctaagctgctgcatcgcatttggcgaaagatgtcactggagcatacttaatagttgggtttcaccattatttgtgtcgcagttcattgtggaatttgggttccaataaattctgatacacctttgttgttcacctgaaatattgtgttactagaatcgtcatacggggctgggctatttgtatcattaccgcttttggagaactctttatacttttgtttgtagcctgtgtactcgcctaaatcaattatagcaatgttgatgaatttttagct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0278000, RefSeq:Os03g0278000