Os03g0279400

From RiceWiki
Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0279400| Description = Similar to Arginine biosynthesis bifunctional protein argJ 1 [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (O...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0279400

Description

Similar to Arginine biosynthesis bifunctional protein argJ 1 [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (Ornithine transacetylase) (OATase)

Version

NM_001056267.1 GI:115452262 GeneID:4332434

Length

4162 bp

Definition

Oryza sativa Japonica Group Os03g0279400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9557426..9561587

Sequence Coding Region

9557675..9557757,9558174..9558244,9558356..9558501,9558608..9558685,9558883..9558945
,9559204..9559326,9559642..9559728,9559829..9559909,9560000..9560069
,9560161..9560219,9560320..9560388,9560469..9560519,9560620..9560664
,9560760..9560833,9561101..9561224,9561330..9561497

Expression

GEO Profiles:Os03g0279400

Genome Context

<gbrowseImage1> name=NC_008396:9557426..9561587 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9557426..9561587 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcccccttccctcctgctcctccatccacgcacgccgctgccgcaccaccaccgctcctccttccggacgagctctccgcggccatccaggatggtctgcgccgctgccgaggggtttatctccgcggcgccgatcctcctccccgacggcccgtggaagcaggtggaaggcggcgtcacggcggcgaaggggttcaaggcggcgggtatctacggcggtctgcgcgccaagggcgagaagcccgaccttgcgctggtcgcctgcgacgtcgacgccactgtcgcgggagcttttactacgaatgttgttgctgctgcaccagttttgtactgtaagcgtgtccttaattcatcaaaaacagctcgagctgtgttaattaatgctggacaagcaaatgcagcaacaggtgatgcaggatatcaggatacagtggatagtgctgatgctgttgccaagcttcttaatgtgagcacaaatgacatactgatccagtccactggtgttattggtcagagaataaagaaggaggcacttgtaaattcacttcatagacttgtgggctcactgtcttcatccattgagggtgcaaattctgcagctgtggccattacaactacagaccttgttagcaagagcatcgctgtacagacagagattggaggagtgcctatcaaaataggaggaatggccaaaggttctgggatgattcatccaaatatggcaacaatgcttggtgttttaacaactgacgctcaagtcagcagtgatgtttggagagaaatggtccgaacatcagtgagtagaagcttcaatcaaataacagtggatggtgatacgagtaccaatgactgtgttattgctctggctagtgggttatctggtttatccagtatccttactcatgatagcactgaagctcaacagttccaagcatgcttagatgctgtaatgcaaggtcttgcaaaatccatagcatgggatggtgagggtgcaacatgtctaattgaggttactgtagctggtgccaataatgaggctgaagcagctaaaattgctcgttcagtggcatcttcctccctggttaaagccgctgtatttggaagagacccaaactggggacgtattgcttgttctgtcggttattcaggcattcagtttgatgcggaccagcttgatatttcccttggagctattccactaatgaaaaatggtcaaccactcccatttgacagatctgcggccagcaagtatctgaaagatgctggagacatccatggtacagtgaacattgatgtatcagttgggaggggaggaggaagtggaaaggcctggggctgtgatttaagttataagtatgtcgagataaatgcggaatacacgacgtga</cdnaseq>

Protein Sequence

<aaseq>MPPPSLLLLHPRTPLPHHHRSSFRTSSPRPSRMVCAAAEGFISA APILLPDGPWKQVEGGVTAAKGFKAAGIYGGLRAKGEKPDLALVACDVDATVAGAFTT NVVAAAPVLYCKRVLNSSKTARAVLINAGQANAATGDAGYQDTVDSADAVAKLLNVST NDILIQSTGVIGQRIKKEALVNSLHRLVGSLSSSIEGANSAAVAITTTDLVSKSIAVQ TEIGGVPIKIGGMAKGSGMIHPNMATMLGVLTTDAQVSSDVWREMVRTSVSRSFNQIT VDGDTSTNDCVIALASGLSGLSSILTHDSTEAQQFQACLDAVMQGLAKSIAWDGEGAT CLIEVTVAGANNEAEAAKIARSVASSSLVKAAVFGRDPNWGRIACSVGYSGIQFDADQ LDISLGAIPLMKNGQPLPFDRSAASKYLKDAGDIHGTVNIDVSVGRGGGSGKAWGCDL SYKYVEINAEYTT</aaseq>

Gene Sequence

<dnaseqindica>3831..3913#3344..3414#3087..3232#2903..2980#2643..2705#2262..2384#1860..1946#1679..1759#1519..1588#1369..1427#1200..1268#1069..1119#924..968#755..828#364..487#91..258#ggcccgctcccacgctgtgtcacacccacctgccacctcgccgcgacgaccccctcgccgccggccgccaccgcgcgtcaactgccggcgatgccgcccccttccctcctgctcctccatccacgcacgccgctgccgcaccaccaccgctcctccttccggacgagctctccgcggccatccaggatggtctgcgccgctgccgaggggtttatctccgcggcgccgatcctcctccccgacggcccgtggaagcaggtgggtaactggtttccggtgaagccgcgggggcgttgggctgtgggtttttttttttcagtatgctgaatctggtggctggttgctgatcgggtgcgggttcaggtggaaggcggcgtcacggcggcgaaggggttcaaggcggcgggtatctacggcggtctgcgcgccaagggcgagaagcccgaccttgcgctggtcgcctgcgacgtcgacgccactgtcgcgggtaaaggctatcaccaacactttctattcagttcactcgtagtagcagaagtttcttcagagttcagacttcagtttcacttctcgttaccatttctcagcaactgctaacggctgcagaatgtgtatcaatgcgtgctcgttaggatgaacggctgtgaatattttgctgttctgagttctgagttgcgttggtgtatcggcttgtgcagtgccatatgaaatctgtcggttgggcttagttattgtcctgttgggttcttttcaggagcttttactacgaatgttgttgctgctgcaccagttttgtactgtaagcgtgtccttaattcatcaaaaacagtaagttaattctacctctcatctcaccttttgacaaataaatggaagtaataattcattgaggtattctatgttttcaatgtattgttttctaggctcgagctgtgttaattaatgctggacaagcaaatgcagcaacagtaagtgtttctgacaaccgtatccgttccgctggctctgtactgtattcgaaaacaccgtggctagtattgatatacttatctaaataatttatctcagggtgatgcaggatatcaggatacagtggatagtgctgatgctgttgccaaggtacttacttgccgattggatgcctataagttggccaggcatcaatgatgttttctctaattggctatcggtttttgcagcttcttaatgtgagcacaaatgacatactgatccagtccactggtgttattggtcagagaataaagaaggtacagtgctgccacaaccaaactatggttgagtgactgtactaaactagtaggctaacctagtacaatttcatctgacgcttgggttttgacaatgcaggaggcacttgtaaattcacttcatagacttgtgggctcactgtcttcatccattgaggggtatagttagcacgcattgcatgtaaaatgcatctgcaagtgtcatttctatatgactatatctaacttattacctctgcccctgtcacagtgcaaattctgcagctgtggccattacaactacagaccttgttagcaagagcatcgctgtacagacagaggtttgactttcttagcctcgtattattctcattaggtttatttggtttgacattatctttgttcttatcatctctttattgaaaagttagattggaggagtgcctatcaaaataggaggaatggccaaaggttctgggatgattcatccaaatatggcaacaatgcttggtgtaagttctgtatcaatctcattttccacacagtcctactcctctattgatccctttctcaaggcatgtatgagcttcattataaccctttttcttacaggttttaacaactgacgctcaagtcagcagtgatgtttggagagaaatggtccgaacatcagtgagtagaagcttcaatcaaataacagtaagtactgagaaaccattcctcttgagttgattagcatgtcaacagttactcaacctacaaaagaacttatcaatcttaattactcacatcacatgggtaaatatgggcaaattaaactgtaataacaaacaagagaactgtctgcaaaatgctcctaaatttagcaagcattgaggtttagttttctttgtgttatggaaatctaacgggcataatgcatcctctgtctactaatttggtatggttgttatggcaatttgatcctgaaactagtaggcaaacatcttgattgtttacgtcataattctttaggtggatggtgatacgagtaccaatgactgtgttattgctctggctagtgggttatctggtttatccagtatccttactcatgatagcactgaagctcaacagttccaagcatgcttagatgctgtaagttttacttcccccaagcttttccttttcatgtgactccaggctccatgttcttgtctccatatttattttgaaatgcacttttctgtagacttatcagattactccagtctgaaatttcttttcttagcttcccataggatggaccgatatgaatcttattttcttcttggttgcagagtttttgatgtatttttatttacagcaaactgtacctataaaggaaaaagatgctgacctatttatctcctgtaggtaatgcaaggtcttgcaaaatccatagcatgggatggtgagggtgcaacatgtctaattgaggttaagcgcttagcatttcattcacttcgcaccatcagcatagtatgctgcattttcttttagcatgatgacttgacgtttgatatacaaattgagttatctggcaactgctgcattcaattattcatcatatcaaatttcctttcttaatttcttcggtgtgacacaagcttctaaagtgcccattccctttgtaggttactgtagctggtgccaataatgaggctgaagcagctaaaattgctcgttcagtggcatcttcctccctggttaaagtatgatactgtttagcagcaaaattttgctaattaggagaggattgacacccctctgtcattcgttagcccagaaagcctgagttgttaaattattttttatcaggccgctgtatttggaagagacccaaactggggacgtattgcttgttctgtcggttattcaggcattcagtttgatgcggaccagcttgatatttcccttggagctattccactaatgaaaaatggtcaaccactcccatttgacaggttaagaaaccttgacaacatagaattattttttttattgacgactttgaatgaattgtaatttgtgtagatcttacaatagaatttaaaatatctactgtttcttcatagatctgcggccagcaagtatctgaaagatgctggagacatccatggtacagtgaacattgatgtatcagttggtaagcattcaacttgttgcataactcgacttcttgttgcgtggctgaatctgtagtatgttcttgtgtcacaatgttagtcatggacttctggttgcatcatttctctagaaagcacaaatgtgcctcttgcatccaacatatatttgcactgaaccggagtagttttattggcttgatgcatttgctttggggtatcctttcttattccttgatttcctatttggcatggcacctttagttgaagaaaacttgaacagttgcgcacaaaagtaaatttgtttttaggaaagctaagattacgtcttgcccagccgtgttttttacctgaacaaccagatgcttcattatcattgtcttgtacgaaattgtttgagactggcatatgacgcatgttcgttgtgtttatctgccagggaggggaggaggaagtggaaaggcctggggctgtgatttaagttataagtatgtcgagataaatgcggaatacacgacgtgaaagtcttacactgtctatgaagaacggtctccgcttgatggaaatggaacgctgttcggatgcagctaggcatctgagcgatctgtatcatattgagactcgccctttgttgtatcaatcggctgaacgtgcattcttttgtaagtgtaaggaatgcgctatacaatgttacggcacaataagtaagctgtctgccatgccatctgattcaattctaatttataacagtgacaggggatgtttgggcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0279400, RefSeq:Os03g0279400