Os03g0280700

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Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0280700| Description = Hypothetical protein| Version = NM_001056273.2 GI:297600729 GeneID:4332440| Length = 6915 bp| Definition = Oryza sa...")
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Gene Name

Os03g0280700

Description

Hypothetical protein

Version

NM_001056273.2 GI:297600729 GeneID:4332440

Length

6915 bp

Definition

Oryza sativa Japonica Group Os03g0280700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9642583..9649497

Sequence Coding Region

9642645..9642819,9644855..9644907,9645534..9647627

Expression

GEO Profiles:Os03g0280700

Genome Context

<gbrowseImage1> name=NC_008396:9642583..9649497 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9642583..9649497 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcggcggcggcctcgtcgctgctgcgtcgtccagccgggggctccagacgacgccgggcatggcgggcattgggcgcggcagatcgaggcgcaggggggaggccggcgaagggtggatggagcggaatgcggcggcgggctccacttcccccgccgccgtcgatcaccgaggtactgttttgaggaaacaaacaagtaatcctgggatgctttctgattctatgcttgctgcgggaaactggcgaagtaaatctaagaaggctagtggtacaccaatgaaaacacttattgatgaagaattctcgaaagatgtcaatgctaggcacacttcaccaggtgttgtaggaagactaatgggtcttgattcactgccttcatttggagccaataaccaacacagatatgcccaaagtcatgcagaaaagtcttcaccttgttgcgctcacgagaggcgtagtttttccgaatatattccacatcggagaagcacagatgagatgccagaagtcaaagatgtttttgaagttatggaggcaacaagaatgaaaatacaccggagcccaagatctaaaaatgaaaatgtaacttcaacatttggcaagactggtagtcctgatctagatcagatgaggcaaaaacttatggatgcaaagcgcctttctactgatgaatcccttcagatatcagaagagctcagtgaaacacttgacgtattggcatccaataaagatcttcttttgcaatttcttcaaaaacttgatcctatagtcaaaagagacctacatgatcatgattctccgtcctctactgcaaattgcatcacaatattgaaaccatctagaagaaatcaatttactgacacagacaatatctattcacaagataaaggtgctgaaagctacttctacaagcaaaaggaagttgaacactctcagagtaggccatatactaagttgcccaatcaatccccaaaagaagactctggttcactaaggcagaaactgtcaaggtcaagtcaccaggaaatcagtgacaagcgagtttgctccacacggattgttgtcctgaaaccaagtcttgataaagctcaggacattgaaggagccttcgccttaaggaatgaactctctcgttttgattttaggaggcacaaaccatgtcatggtgatgctatgtggagcccatgtactgaagaatacataggcccccttagagattctgaaacattcgatgatgtagcgaagggatctaaagaaattgctagaggggttatgaaacaaatgagatccgctaggggtgttggaaccaggaaacacattttcaaaccagagactagcacatttgtttcagatgaaaggtcgcaacctctgtcatctcgttctaatgtcaagtcctctgaggtatttcatagatcctctgagctacatgatggatatgcttcttctagcttcacgtcctcaccatcatattcaacagaaacaaaagttagcagggaagcaaagaaacacctctctaacagatggaaggccacccaccgatatcagcatcaagcagacaagaataatggattcagcatgcttggagacatgcttgctctttctgaccaggaagcttcaaaagttgctacccagaaaatatcaaacaggaaatatccaaagggtgaatcacagaaagatagaatgacaagcacatgtaactctcctcttggcatcagcagcaatgatggttggcgagatgtggctacaggtagtttaccaaggtccaaatctcttccaacacccttcaatcggggagttcagaagtcaaacaacagaaaacgaactggcagacataatgagttctctatgctgaaagatgttctcaaagtaggaccctatgattctgaacatgcatgcaacagcaggaatagaaaatctctgtttcaagatgcaacatttcatagcgatggagctgatcgtgtctcctcagataacgaggaaagagcgataattgaacgcgaaatacatgtaaattcagaggaaccaataaatggtatcgccttggccaattcatctaaagggacacttctacatccttcaaatcctgacaatgagttagatacagtgtattacctggataccagtcctgtggttcctggacagaagaaagaactatgttctcctgataggcagaaccagcagatacatcaacagtcaccaatagaatcagacgaccatcttcttgtacctagactcaacatttctatgactcaggtaaatttaggtgaatttatttcttgcattatgttgaccatttcctatggaaaaattcatccatag</cdnaseq>

Protein Sequence

<aaseq>MSGGGLVAAASSSRGLQTTPGMAGIGRGRSRRRGEAGEGWMERN AAAGSTSPAAVDHRGTVLRKQTSNPGMLSDSMLAAGNWRSKSKKASGTPMKTLIDEEF SKDVNARHTSPGVVGRLMGLDSLPSFGANNQHRYAQSHAEKSSPCCAHERRSFSEYIP HRRSTDEMPEVKDVFEVMEATRMKIHRSPRSKNENVTSTFGKTGSPDLDQMRQKLMDA KRLSTDESLQISEELSETLDVLASNKDLLLQFLQKLDPIVKRDLHDHDSPSSTANCIT ILKPSRRNQFTDTDNIYSQDKGAESYFYKQKEVEHSQSRPYTKLPNQSPKEDSGSLRQ KLSRSSHQEISDKRVCSTRIVVLKPSLDKAQDIEGAFALRNELSRFDFRRHKPCHGDA MWSPCTEEYIGPLRDSETFDDVAKGSKEIARGVMKQMRSARGVGTRKHIFKPETSTFV SDERSQPLSSRSNVKSSEVFHRSSELHDGYASSSFTSSPSYSTETKVSREAKKHLSNR WKATHRYQHQADKNNGFSMLGDMLALSDQEASKVATQKISNRKYPKGESQKDRMTSTC NSPLGISSNDGWRDVATGSLPRSKSLPTPFNRGVQKSNNRKRTGRHNEFSMLKDVLKV GPYDSEHACNSRNRKSLFQDATFHSDGADRVSSDNEERAIIEREIHVNSEEPINGIAL ANSSKGTLLHPSNPDNELDTVYYLDTSPVVPGQKKELCSPDRQNQQIHQQSPIESDDH LLVPRLNISMTQVNLGEFISCIMLTISYGKIHP</aaseq>

Gene Sequence

<dnaseqindica>63..237#2273..2325#2952..5045#acgcgcacacgcgagagagagagaaaaaaatcgatctgctcgtctagctctcgcggcggtggatgagcggcggcggcctcgtcgctgctgcgtcgtccagccgggggctccagacgacgccgggcatggcgggcattgggcgcggcagatcgaggcgcaggggggaggccggcgaagggtggatggagcggaatgcggcggcgggctccacttcccccgccgccgtcgatcaccgaggttcagttatcttctctcctcccccaatctcctagccgtctttctcctcttctttattttgaaattttgcatctttttttttttctccgcggaattttcgggtgagctttttttaggagtccatggttaaagatctgctactgaaggttttttcggggtttaccttacgattctgaatctgaatgaaaggttcttttttttttgtcatgatctacacctcagagaaatatcatataagtgggtgttacagaaaaggacgctttttttttctctctcccttggctgatcacgttatcaaatcgggaacttggggtaactagcttgacatttgatcttctgagttcgaagaaaacattgcggagtaaaacaatgtagaattttctttttacccttctgttttaaaataaggaggcataactttcacatggactttaggtcctagtcaagcctttattggagagagagaggattcttgctttcaaaattcaaatgattctagcggacttgttttgatttgtttgcttttcctttatgttgtttcattgcagctacaatagcctagattctaggagtactactgtaccaaacatgaaagatttccattcagtttttgcatcctggattgaactgctagagcattggccgcattttattattgggggtcctctagagtgtgcaattctaaggaaatgagatattgtcgacttgcctatcccacgaaatcacgcaaagaaacctcatttgcccgtaaattgctggttatgtaagtaaaagcattaaataatgttcttttgcgtccccatttcagttggatgccgtgaaggttcatagccaagtgggcttcttattctaatcaccaagcgaatcttcgcttaaacatagatttttcacttagtctgtaaaagagccgttcactgcgttaactagtgaaacatgtttttttgccaactcgatgaattgacatttgatctacaaaatgttacatcctggtagaattttcagcctgacgctgccactgccaaatcatgaaaccaaagcactgctatgtgctcgtctaagtcgtcttctatgtgtgctagcaagtttgtaagaatatcccctgtacaagtggcgttatgtgatgaaaggttatttagttacttacttattgtggtaaacaatttattattgttacgtaacttgtggtatcttggttttgcctctgaactctctgcagttcaaacgtaaaacttttttcctcataaaatgagcaggtaattcggaactcctagggtatgtttgtaaactgaatcccattcaatattacttttattgggcctccctgcaccccacagattttgtgcacaagttggctgtttcaatctatttattttttatttttcatttcacattgattcgcttgaaggaattggatcaagagagctcgaaaacctcaatcctactcaaccttttccttttaacttctcctttttagacttgatgtttgtatattaatagtatatcaagtatattttcattatggcaaaagtaaatttattttcttgtggtgactggtctatgtgctatcaaagcatgcctgatcaaggccaaaagacagtaatacatgtcttcctactcaccttccctgtcttttgtggttagcagaaattgaacatgaccctaaactcttcgttctatctcttaggttgagttcgttaggactggttgggaacaagtatcctgtgcacggaaaacggagcggtccattagcgcgtgattaattaagtattagctatttttccttcaaaaatggatcaatatgatcctttaagtaactttcatatagaaactttttgcaaaaaatgtaccgtttagcagtttgaaaagcgtgcgcgcggaacacgagagagaggagttgggaaaactggctgccgaacacagcctaatagttcaacaccaagtgccttctgcttgccattttaccgtgctgtttgttttgctattgctgtggtatatctacaggaaacattcactgttacctttttctttgattcaggtactgttttgaggaaacaaacaagtaatcctgggatgctttctgattctatggtgagtgatttgcatttagtagaagaggtatatcatatattgcacatacttttttagtttcggttataaataaggagctcaaaaacatgttcttttctctagcttaatgatgattacctttggcataaaactagaaggtcaaaactgggatgcacatgttcttcttatctcaacactttccatatctcttgtagtacaaatgaacagctaatagtcaaatctgaaaattggcagcacattattttcttctgtcactatacctttgtatctcttgtacaagtgaatgtcgctgaaaatgggcagtacataactttgttctgttactatacattgcatatcttgtaatacaagtgaatgttgctaatactcagatctgaaaatgggcagtacataattttctttcgttactataccttgcatatcttgtaatacaagtgaatgttgctaatagtcaaatctgaaagtgggtactacataattgtcttctgttactattctagtacaagtgaatgttgctaatactcaaatctgaaaatgggtagtacataattgtcctctgttactatacctcgttcctatattttaattaatggattgctatgcctttttttttctgctcttctcagcttgctgcgggaaactggcgaagtaaatctaagaaggctagtggtacaccaatgaaaacacttattgatgaagaattctcgaaagatgtcaatgctaggcacacttcaccaggtgttgtaggaagactaatgggtcttgattcactgccttcatttggagccaataaccaacacagatatgcccaaagtcatgcagaaaagtcttcaccttgttgcgctcacgagaggcgtagtttttccgaatatattccacatcggagaagcacagatgagatgccagaagtcaaagatgtttttgaagttatggaggcaacaagaatgaaaatacaccggagcccaagatctaaaaatgaaaatgtaacttcaacatttggcaagactggtagtcctgatctagatcagatgaggcaaaaacttatggatgcaaagcgcctttctactgatgaatcccttcagatatcagaagagctcagtgaaacacttgacgtattggcatccaataaagatcttcttttgcaatttcttcaaaaacttgatcctatagtcaaaagagacctacatgatcatgattctccgtcctctactgcaaattgcatcacaatattgaaaccatctagaagaaatcaatttactgacacagacaatatctattcacaagataaaggtgctgaaagctacttctacaagcaaaaggaagttgaacactctcagagtaggccatatactaagttgcccaatcaatccccaaaagaagactctggttcactaaggcagaaactgtcaaggtcaagtcaccaggaaatcagtgacaagcgagtttgctccacacggattgttgtcctgaaaccaagtcttgataaagctcaggacattgaaggagccttcgccttaaggaatgaactctctcgttttgattttaggaggcacaaaccatgtcatggtgatgctatgtggagcccatgtactgaagaatacataggcccccttagagattctgaaacattcgatgatgtagcgaagggatctaaagaaattgctagaggggttatgaaacaaatgagatccgctaggggtgttggaaccaggaaacacattttcaaaccagagactagcacatttgtttcagatgaaaggtcgcaacctctgtcatctcgttctaatgtcaagtcctctgaggtatttcatagatcctctgagctacatgatggatatgcttcttctagcttcacgtcctcaccatcatattcaacagaaacaaaagttagcagggaagcaaagaaacacctctctaacagatggaaggccacccaccgatatcagcatcaagcagacaagaataatggattcagcatgcttggagacatgcttgctctttctgaccaggaagcttcaaaagttgctacccagaaaatatcaaacaggaaatatccaaagggtgaatcacagaaagatagaatgacaagcacatgtaactctcctcttggcatcagcagcaatgatggttggcgagatgtggctacaggtagtttaccaaggtccaaatctcttccaacacccttcaatcggggagttcagaagtcaaacaacagaaaacgaactggcagacataatgagttctctatgctgaaagatgttctcaaagtaggaccctatgattctgaacatgcatgcaacagcaggaatagaaaatctctgtttcaagatgcaacatttcatagcgatggagctgatcgtgtctcctcagataacgaggaaagagcgataattgaacgcgaaatacatgtaaattcagaggaaccaataaatggtatcgccttggccaattcatctaaagggacacttctacatccttcaaatcctgacaatgagttagatacagtgtattacctggataccagtcctgtggttcctggacagaagaaagaactatgttctcctgataggcagaaccagcagatacatcaacagtcaccaatagaatcagacgaccatcttcttgtacctagactcaacatttctatgactcaggtaaatttaggtgaatttatttcttgcattatgttgaccatttcctatggaaaaattcatccataggtgtgaaaagctagatgtattttttctatgagtttttatgtgtatcatccatttttcctcagaacacatttttcatgtgcacgtctagtgctaaagcctttgttgtgaatattctgtgtggatgatatcatgttgatttgttttctgttgcctttcttgacatcttctgattgctgacttcatccatgtactcaggctgaggggatcgaacagcatcagtgtgatgacaatccagtgtgcaattttgaggaaaaatcagtatctgccatgaggattgacgaccatcaaagtgatggcaatcaagtcccatggatgattccccaaacaggatcagaatctccagtgagctccgacaaagatgatcaacaaagtccagtttctgttcttgaatcttccttggacgctgaagacatttattctggtgattttgagaaaattagtgctgatcttcaaggcaagtaacccagttcttgtttccctaatcatcttgctactaattcatgttcttaagtttgatttactgggatattgcaggactgagaatgcaactgcgacttctcaagatggaagctacagacagcgcagatgacactgagctaatatcaagtgatgatgagcttacgacagaaagtcagccacttccagataaggaaatatcccctacttttagggatgaagaagaaagggatttctcttacgtgctggatatgctgattgttttgggcattaatactgctaaccgggatcagctactagacatgtgctacttatcagagtgcccagctggctctgatgtgtttgatgtacttgaaaacaagtacaatagcctcattctgtggccgtcaccggagaggaagctcctgtttgatctcacaaatgatgtcattgcagatataatcacttctgtgatgcagcatagctcaaaggggttgtcgtggagctgctcgtccagattggaccaggagggattcgttgaggtggtgtggcaaagggtggtcgagcttcggcaagaaatggagtatgctcatgagggcctattcatggacttggggtgggttggttctgaagatggcatcgatcttgttgctagtgaggtcgggaaaatggtacatgaggatctccttcaagaaaccatatctgagtttctgggggtgacaaaatctgctatgatctgtggctggaatgaaccatgaattgatcgctacagccattgaagcatactggtagaatcagtggttgatgccttgatgcttactggaagctgccatgaattggttaaagaaatctcaagaacagaaggtgagattgttgcagcctttcggtgtgctgcgttccggttggacctggttgtaactatggattttaataactgtgacctctggagttgtccctccaaactagaaaaaagagagtacattttctgtggcatgatgccggagtataaattttggcatgaaccaatcgtatatgtgttaagtttacctgcatgccaatattgcttttgttattcttgtttgcaaatgtggccatgctgctgcttaccataatcagtggaggaagcatacatgcgaggaagctgggatttcttgctgtaatgttgtgagcttggtgaattttgttatggcaagttgggaacctttttcagtccaattctattagttgaaggtgatttttggaaaacagattagaaactcggcctctacacatccagttatccaattggttgcaggtgatgggtgaacatgttctaatttggcgcgagctgctgaaaattcatccaggtttgctattaattcatgcgtccgatggttattgaatgttgaacaatgtaactactccctccactctaaaataaatttatttttcaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0280700, RefSeq:Os03g0280700