Os03g0281300

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Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0281300| Description = contains InterPro domain(s): IPR008731| Version = NM_001056277.1 GI:115452282 GeneID:4332445| Length = 8426 bp| Def...")
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Gene Name

Os03g0281300

Description

contains InterPro domain(s): IPR008731

Version

NM_001056277.1 GI:115452282 GeneID:4332445

Length

8426 bp

Definition

Oryza sativa Japonica Group Os03g0281300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9670499..9678924

Sequence Coding Region

9670653..9670989,9671237..9671307,9671447..9671540,9671627..9671694,9671787..9671853
,9671993..9672123,9672223..9672330,9674639..9674704,9675989..9676055
,9676342..9676417,9676587..9676698,9677258..9677363,9677463..9677536
,9677756..9677852,9677978..9678030,9678144..9678239,9678338..9678529
,9678608..9678757

Expression

GEO Profiles:Os03g0281300

Genome Context

<gbrowseImage1> name=NC_008396:9670499..9678924 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9670499..9678924 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtggctccgcaacgcggtgcaccgcgcggtggaggcgagcggcgggcccctcctcacccgcaccgtccgctcctccctcggcaccgtcgtccaccacgccggccaggccgtcgcgggcggcgccaggctcatcaacgaccgcatcgggagccggagctacaagagcatgaggctgacggcgaagaggctggaggacgcggcgctgtcctacagaggggaggaccgggtgcagctgctgcgccggtggctcgtcatgctcagggagacccagcgcgcggccgcggcggagaaggaggcgaagcgcgcgggccatcctgatcaacacctgcccgtgttggatctgtatatggattacgagaccggggccgagccgatgaactttatccatgtcttcctctacagccaagcgctcgaatgcctcgttttatccatgattatggaattccctactgaagaagaagcctcgcttctctcagaagtttttggattgtgtcttcctggaggaaaggatgtccacaatgcaatacttagtagcataaaggagttggcaaagttattttcaacttaccatgatgaagtgttggcaaaacgtgctgagctgcttcaatttgctcaatgtgcaatctcagggttaaaaataaatcctgaaatttcaagattagatgatgaaatcttgcagctacaacaacggataaatggaatggacgctcttcgatctaattcgaccagtaggcgtagcaaagcatcacaaacagtcgcggagggtttcagaactgcagttaatgagattcgcttatgctctagaatggaagaacttgtattgatgaagaaatcaatgcatcatggcaactcattcgagacttattttgagaaggttaataaattgaaggttttgtcagaatcacttgcaaattcagctgcaaaagcagaaaggagaatcatggaaaataggctacaaaaggaggaatctcttattttccgagttaccaaaacaaatgaagttagtgtaactgaaaaggaaatactggctgagatctctgggcttcagaagcaaaaggatctacttgaggatgaactaaagaaagtaaataatatactgaatgcggctgtaatgaagcttaaaaaaactagagaggagagagaccaattcgatgaagccagcaatcagattgtgctgcacttgaaagcaaaggaggaagaactgtcaagatctattgcttcctgcaaagttgagtcaagcactgtcggtgcatggatcatatttttagaagatacatggaagttgcagtctttgtatgaagaactaaggaaaaaacaagccaatgatgaactggacaagtgtgcgacttgctttgcaaaattgattaatcatcatctttatgcacgagtggaagagctgagcacttgcattgatagtataaagacctttgttgataacttgaaaatatttgataacagatcggtatcagcggaagatggaaacaatggttcgtccaagcaatcaaatccacgtaaataccttgaggaagaatatctggaagctgagaaaaaggtggtagcagcattcagtttggttgataacatcagagcaatatatttgtccaatcaagattatcaagccaggagagatgatcctgacgtgaaaaaactatttgccaacattgacaagctgcgggtcgagtttgaatcggttccacggccactgctgcaaatcgagatcaaagaaagagaagagagagcaaagcaatctcgttccttgcaggctgctcgctcatcaagacaagcaggacacgagtccccaatacctgctcaactcaggacacgcctgccatcagagtccgactcagaactggcgaaatctgacccagagtacagggagtattcggctgatgacataagtgggtgggagtttgatgaccttgaagatgatggggcaaggctttcagtgaaatctatatag</cdnaseq>

Protein Sequence

<aaseq>MSWLRNAVHRAVEASGGPLLTRTVRSSLGTVVHHAGQAVAGGAR LINDRIGSRSYKSMRLTAKRLEDAALSYRGEDRVQLLRRWLVMLRETQRAAAAEKEAK RAGHPDQHLPVLDLYMDYETGAEPMNFIHVFLYSQALECLVLSMIMEFPTEEEASLLS EVFGLCLPGGKDVHNAILSSIKELAKLFSTYHDEVLAKRAELLQFAQCAISGLKINPE ISRLDDEILQLQQRINGMDALRSNSTSRRSKASQTVAEGFRTAVNEIRLCSRMEELVL MKKSMHHGNSFETYFEKVNKLKVLSESLANSAAKAERRIMENRLQKEESLIFRVTKTN EVSVTEKEILAEISGLQKQKDLLEDELKKVNNILNAAVMKLKKTREERDQFDEASNQI VLHLKAKEEELSRSIASCKVESSTVGAWIIFLEDTWKLQSLYEELRKKQANDELDKCA TCFAKLINHHLYARVEELSTCIDSIKTFVDNLKIFDNRSVSAEDGNNGSSKQSNPRKY LEEEYLEAEKKVVAAFSLVDNIRAIYLSNQDYQARRDDPDVKKLFANIDKLRVEFESV PRPLLQIEIKEREERAKQSRSLQAARSSRQAGHESPIPAQLRTRLPSESDSELAKSDP EYREYSADDISGWEFDDLEDDGARLSVKSI</aaseq>

Gene Sequence

<dnaseqindica>7936..8272#7618..7688#7385..7478#7231..7298#7072..7138#6802..6932#6595..6702#4221..4286#2870..2936#2508..2583#2227..2338#1562..1667#1389..1462#1073..1169#895..947#686..781#396..587#168..317#attcccaacccgcgcgcgccccctcctccccctcctcctcctcttcctcctcctccctggattcctacctctcgtttccccgagcagacgctcccctatcccgctgcgaaggagaggaggcggaggcggaggcggaggtggagatcgacctagctagctagctcacgatgtcgtggctccgcaacgcggtgcaccgcgcggtggaggcgagcggcgggcccctcctcacccgcaccgtccgctcctccctcggcaccgtcgtccaccacgccggccaggccgtcgcgggcggcgccaggctcatcaacgaccgcatcgtacgtgcgcgtcctctcgtgtatggttggttgcggccctaatttgattccgccattgtgttttgtttcttcgggtaggggagccggagctacaagagcatgaggctgacggcgaagaggctggaggacgcggcgctgtcctacagaggggaggaccgggtgcagctgctgcgccggtggctcgtcatgctcagggagacccagcgcgcggccgcggcggagaaggaggcgaagcgcgcgggccatcctgatcaacacctgcccgtgttggtgagcatatatatatatgcgtatctgatctagctttgctttgtgtttctaaactacgtcgcgtgatcgatcgggcatgaactggtgctcatttgcaggatctgtatatggattacgagaccggggccgagccgatgaactttatccatgtcttcctctacagccaagcgctcgaatgcctcgttttatccatggtaggttgcatttgtgcacttcaattttgcgaacgccttgtgtgcgctgggttgctgctatttaggtcactgcttaatgatttgaaacaattatctcgttctctatggatcagattatggaattccctactgaagaagaagcctcgcttctctcagaagtttttgggcaagttcttcaaccatttcatgtctaattactcgtttccagtttttgttgtggctttggaatgtgaaggaaaaccttgaaattttcgctcatttactgttgtggtctgtggatgctgcatgcagattgtgtcttcctggaggaaaggatgtccacaatgcaatacttagtagcataaaggagttggcaaagttattttcaacttaccatgatgaagtgttggtacatacttcctgttttcttcctctaatatcaaagccaaagactggaattaaaaaattccagtctaactgtagacctcttagttccagaaaacctccttagctcagccacttggtccatgggttgatctttgaaactttctaatgattaaattagatgccagaaaaatcataaaatttattatttataaatatgttcttctttgtttttcctaaccaggcaaaacgtgctgagctgcttcaatttgctcaatgtgcaatctcagggttaaaaataaatcctgaaatttcaaggttagctctttcttttgggaggaggagggtttgttttggtaattcacggttgcacgcgtattttacatgatccaaaactctgtttcttcttaattccagattagatgatgaaatcttgcagctacaacaacggataaatggaatggacgctcttcgatctaattcgaccagtaggcgtagcaaagcatcacaaacagtcgcggaggtaggtctagtttatttaccttcacagaatcacaaatgctacctttaattgtgctatatgagctggtgacctatcaaaagaagagaaatacagactaattttgttgtttggtccatatgtaaggttgacatgtttagactgtggactatgaaagactttgtcaatgctctgattaataaattttgaattacccactatttcaagaaattggagtttggagattatagaactgcactttgtgcatatgcataatgtttttatattgtttctatacatgcatttatgttcaaatgcacacccactctttggtttgtgctaaaacgacaaatgtgtgagtatggcctactaaaaacattactgtccagcgtccatggaaaatgaagagaagagagtagttaataatgacaagtgatcacatattaattgcattatcctttctaagaagtgcataaaaatgttcatttgtatccctggaattttttatcatctgacaattcatacttattcttgctggttatttgaatgcggacagctgtgtattttttcatactatttgcagggtttcagaactgcagttaatgagattcgcttatgctctagaatggaagaacttgtattgatgaagaaatcaatgcatcatggcaactcattcgagacttattttgagaaggcatgatatttacaattcctatattaatttggatttgtgtcattgttctggatagttcttcattctagaattcatatttaacacatcaataacagttatctacttgtcacccctttttacccccgatatgtgtttactactttaatatccatctcataaaactttgcaggttaataaattgaaggttttgtcagaatcacttgcaaattcagctgcaaaagcagaaaggagaatcatggaaaataggtttctgtcttaatcatgatgtgtgtattgcattcactttgagcgatttagcatgtagttatttcacagaatatgagggcggtcaaagtaattttggtgcagtataattggtacagcttgaaatgatatctagattttatagttagtggtgatatgtagattttaggaaaaataattatattatgttgtacttttcacttcagaaccgctttatgttgccaccaaaattaatgaaatgaccctttctgctttgatgtgaattttgtggcttatgtctgcaatgtaggctacaaaaggaggaatctcttattttccgagttaccaaaacaaatgaagttagtgtaactgaaaaggtaactcctttgctatgagcctgtgaattaccactccaactattgtggacgttgttgtacttgcatacatatacatatacaacgaggaaacttggcgtttatcttgcattcaaatcaataaatagttttacatatattttcctgaagcacaaagaagaccatcttaacttgatctatcatgtccatctaaccattatttctgaaggataaaacatagctggacttctgaacttctctaacatcttcttcagtagtcattatcatataaactagcatggtggcccgtgcagattgcgcggctagcatcattatattttctctcatataatagcatatatgttttctcattatatcaaattttagttatttgtaaattatatataatcctatatggactctagactcgtcttttaattttttttttaattccgaattttctgtaaattgtatttctatataggctctatgctcttcttccaatattatttatttttattctgaatttttattatttctagttgtatttctatgtggactctaaactcatctttcaatattctttaatttttaatttcgaatttcagttacttctaaattgtattcctatattgactttaaactcttctttccatgtttttcttaatttcgaattttagttatttgtaaattgtttttttatacggactctaaaaactctacttttaattttattgtgtttattccaaattttggttagttttaaattcctatatggattctatagtctacttctaatattccttattttttaattccgaatttctattttttcttaattgtatttctatatggactctatactctacttctaatattccttatttttaattccaaatttctattatttcctaattgtatttctatatggactctatactctacttctaatattccttatttttaattccgaatttcagttatttcctaattgtatttctatatggactctagtctcctcttctaatattccttattttttaattccgagtttcaactatttctaaattatatttctatatggactctactctcctcttctaatattccttattttttaattctgaatttcagctatttctaaattgtatttctatatggactctgctttttctttttctccgattaatgtgagaatttctaggccatgagagcgaacgtgaaggcttatttttctattcctttaataatataatagatagattgtgtttagtttctgagttctgattggttgcctttcctttgaaggaaatactggctgagatctctgggcttcagaagcaaaaggatctacttgaggatgaactaaagaaagtatgacgatccattctttttccctttttgtacgaaataatgttcccaatccaaccttttgatttatttcattaagaatcacaacatgctggtaatttcttgctttcaaattcagtaaatatgtctattttacttttaagacagcttgaaaagaaggcaccacgttcgctgtggaggctagaaatttccacattaatcggagaaaaagaaaaaaaagagtccaagtagaaatacaatctgaaaaataactgaaattcggaattaaaaataagcaatattaaaagaggagttcatataagaacccaatacgtgattaattaaaattcagaataataaataaataaattgctgaaattagaagaaaagaaaaaagagagttcgagtaggaatacaaatttaaaattactaaatagatttactgtacaaaagataatcatatcaatctaattatggatcataccatccgtactaggagtccttgtccgtttagaaaaatcaattgcagaacttatagagttctaaaccaacatacattcccgcacatatatagggtggagataccaggccagcacgcttaggctgcagcagcagaaaaataatacagtgccctcatttcatacaaatccatatataagaacccaatacgagattaattaaaatttaaaataaaaaataaaataaaacacgaaattagaaataagaaaataaaagaagagttcaacttggaatgcaatttaaaagtaactgaaatttgtaataaaaaataaagactatttaaagaatacaccatctggaacacataacgagattaattaaaattccaaataattaataaaataaattctaaaaatagaataaaacaactaggaatataatttataaataaaatctatcggaacgaaaaatatggaaatttcaaaaaaaaaatcatctagaacacaatgatgataaatgataataaatatcgaagaagtaacagggttgtaaaggagtagagtggtgacagttgatgagacatctaaaaactattaacaaaaccccatatagaatcccaatgacaattaaaaggagtgacgacggacatgccgttaagcagaatggtcacgacggttggcgggatttccaaaaaattaaaaaaataaacctcaatgataatcacattcgattttaaaatctcaaatataataaagagtgggaagaagcgggcgagccgtagaggagtacaaacggtttgatgagactctagagagtaaaaattgaactcaaacgataattatgttcgatttttaaaatcccaatgacaataaagagaggaagcagcggataggccgtagagaagtatattggcagcttttaacgggacttctaagaataaaaaaatgaaacccaatgagacaataaactcaaaaaaactacaagatccaatttttaaaggttaaaaggagaatgaatataagccatggtagatcgaacaagcaaataaagatagggtgacaaaaaagtaaggggtaacaactgatgtgacttttataaaagttacaacattagaaatacggggttgatatggtttggtctttcaaagtcttaagacaatgaaatatctattgaataaattataagtaaaatcatattaaaaatagataattttgtatgggtgctagccacgcaattgcgcgggccacccagctagtttccataaatgcatcagcatgaaccacattaaagaaattatgtatgatttttttttgggggggggggaggagctcttccattcaattaaaaaataagcgttgcaaacaacctagagatgcactgcacagtgtcatcttagtgaattgcaccacagatttacgaaaaatctaaagggacaccaaccaaaacacctcaaaagctacggattatgtttttcatgctattataaggttgaggtatagttggttcttagaaaaaagaagttgaggtaagttctgaatctctcgtacttaatagtgctggtcagtgtatgagaactgggaagatatcctggagaaacactcagggtgtagatatgagcttcgaataaattgtaactttaaattgtgatttatggccttagtagtaccgcacagatgttctttttaatctcatacctgatttaacaacataaaagttttaacggatttataatagaaatttgtcattctacttcgaaaccatatgaagtatttgccaaattatttaccactgtttgttaggttttactgttcttagaagttacgatcccttgatagaaatatttgtaagagtgattctgaaactcagattacaggtaaataatatactgaatgcggctgtaatgaagcttaaaaaaactagagaggagagagaccaattcgatgaagccagcaatcagattgtgctgcacttgaaagcaaaggtttggtaacctcttctttttcagtttctagtattagacagctttattgcaagctaggatttcacttgctcaccgttttctgccatattcatactctaggaggaagaactgtcaagatctattgcttcctgcaaagttgagtcaagcactgtcggtgcatggatcatatttttagaagatacatggaagttgcagtctttgtatgaagaactaaggaaaaaacaagccaagtatgtagcctctcttttagtgaagtattgtgtgatttctctatgaaaatagcattaatagtcatgcgaaatttttatgtacaaagatttgctgatatatgttagtacgttacactgttttgaacttttcttgttgcagtgatgaactggacaagtgtgcgacttgctttgcaaaattgattaatcatcatctttatgcacgagtggtacttcatttgactactatcacggtactatttacaaaggccttttgcatagcctattacttctcaatttgttgtttccttttgttttctaggaagagctgagcacttgcattgatagtataaagacctttgttgataacttgaaaatatttgataacaggtatagctctcacttgctagtttagactacttgcgctgttgcacatgaagttatcctgatgctaattcctcttactgaatcaccagatcggtatcagcggaagatggaaacaatggttcgtccaagcaatcaaatccacgtaaataccttgaggaagaatatctggaagctgagaaaaaggtcatcttaactcttttttgtactgcttgctaaaaatagagatgctggtagcctagtagaggagaacaagctgagatcaggaaactggttcctgaaaggtttctggtgacatttataattaccttttgttctatttcaggtggtagcagcattcagtttggttgataacatcagagcaatatatttgtccaatcaagattatcaagccaggtagttgttcaaactattaggagtgtttacaatccataagaaggtaccaggagttagccacactttctgatgttaatttgtgatacctcctgctacatttatagtgtaaattggcattacaaaacgtgatgctcttagtatcttctcaagaatggtaaataagctcgactactagagccatctggtgacctactttgctgtaaaaaaaaacactagaatcatgtgttttgtgtttttttttttgcaggagagatgatcctgacgtgaaaaaactatttgccaacattgacaagctgcgggtcgagtttgaatcggttccacggccactgctgcaaatcgagatcaaagaaagagaagagagagcaaagcaatctcgttccttgcaggctgctcgctcatcaagacaagcaggacacgagtccccaatacctgctcaactcaggacacgcctgccatcagagtccgactcagaactggcgaaatctgacccagagtacagggagtattcggctgatgacataagtgggtgggagtttgatgaccttgaagatgatggggcaaggctttcagtgaaatctatataggaggagcatcaaatctgggctcaagtcctgaatagttcgtgtagggatagaatcactggcccaaaaatttggagaacgtgttgtagtggagtgctgtgtacaaaactgtacattgtagccttcgttgccgtaaagatttctttgcttcatcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0281300, RefSeq:Os03g0281300