Os10g0188900

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Revision as of 08:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0188900| Description = Conserved hypothetical protein| Version = NM_001070805.1 GI:115481353 GeneID:4348229| Length = 5921 bp| Definition ...")
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Gene Name

Os10g0188900

Description

Conserved hypothetical protein

Version

NM_001070805.1 GI:115481353 GeneID:4348229

Length

5921 bp

Definition

Oryza sativa Japonica Group Os10g0188900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5825188..5831108

Sequence Coding Region

5825328..5825408,5825497..5825703,5826178..5826276,5826436..5826524,5828176..5828292
,5828562..5828667,5828822..5828906,5829006..5829010

Expression

GEO Profiles:Os10g0188900

Genome Context

<gbrowseImage1> name=NC_008403:5825188..5831108 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5825188..5831108 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaagacagtggtcggcgaggaggcgcagctcaaggcattggaggaaaccctctccgcctccgcctctccagctcaggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactccctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcctccgcgcggcccccaaccccaaggccgccaaagctgcctcttccgacgcctcctcgtcgctcgacttcgatgtcgactgggtcgccgagcacgcgcgccaggtctcgaggatgcttcttggaggaatgaccgtcataggtatttacatatgggcgtcagaagcttcgttcaaagcgacttcccctgctgttttatcacaggttcttagagctgtttctcaggttgctcctttgtatggcactggtgttgatgagagactgctcattcatatttcttacagcccaagaaggtgggcctgtcgtatatgtgatatgagctcaggacgtttaaggccatgtgacttcaagtatactaaactattagcttctcttcaaactttcagatgcacatataattttgagataagactgccagttgttcaagctgagccttttaagaaggttatttcaaaggcaatcagtcatctcacgaagcaagtgcagaatgccaaagctttgattgatggagtcctgtttttggatgacatggacaacactttggaggggccacataacgttgaatttcttgtgcctttcaagaacaatttgccggctgaagtttag</cdnaseq>

Protein Sequence

<aaseq>MVKTVVGEEAQLKALEETLSASASPAQVGLVVGKLSASSDRALA YSLIPTPPTDSGAPACSLLRAAPNPKAAKAASSDASSSLDFDVDWVAEHARQVSRMLL GGMTVIGIYIWASEASFKATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRW ACRICDMSSGRLRPCDFKYTKLLASLQTFRCTYNFEIRLPVVQAEPFKKVISKAISHL TKQVQNAKALIDGVLFLDDMDNTLEGPHNVEFLVPFKNNLPAEV</aaseq>

Gene Sequence

<dnaseqindica>141..221#310..516#991..1089#1249..1337#2989..3105#3375..3480#3635..3719#3819..3823#tctctcctccgctgagccgcaacggcctccctctccgctgctccccccatcggcggcgtcgctttcccaccggcaacccttcccctccccagaagagaagagaagagaagagaagaggtgggatctggattgtggagaggatggtgaagacagtggtcggcgaggaggcgcagctcaaggcattggaggaaaccctctccgcctccgcctctccagctcaggtttacccctactctctcatcgccggcagccgcagccatcgccagattcattcgattttgatcttaatcttgatcttgacaatctcaggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactccctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcctccgcgcggcccccaaccccaaggccgccaaagctgcctcttccgacgcctcctcgtcgctcgacttcgatgtcgactgggtcgccgagcacgcgcgccaggtaacaacaactaacgttccttgctactactactagttgtaagtagtatcacaatgccaaaactctgccatccttttattgtctttctcctatatcaaaatctgactatctcctgtaacaatcacaacaccatagtattgcaaatcggaacccccttttttttttatttttttagagaagggtattttttccctggcctctacgcccaaccagatatatgtagcctttttaaattaggaacttagcgtattaaacagggaacttagccctcaaataacccaatctaaaattcgctcatgtagagatttgaactcaaaaccttggggtgctactttacaatcgcaaggtgcgaacccccttagtatcttactcatgatacctactttacgtgggtcgattttgtaagatgcggaccccctttcccctattttttcttggaaacatctgaatacatcatcttctatcaatgcacaggtctcgaggatgcttcttggaggaatgaccgtcataggtatttacatatgggcgtcagaagcttcgttcaaagcgacttcccctgctgttttatcacaggtaccaacttctccttccattgatattatgggttttgggagtcaggttgcatctttatgtcatgccgttttcttttgttttcgcatccacgcccttcttttccaatgataccagcatggacctgtatgtaatggataatttgcttcttctattttccaggttcttagagctgtttctcaggttgctcctttgtatggcactggtgttgatgagagactgctcattcatatttcttacagcccaagaaggtgctccactatttatttttttggggctattgcattcttacccctattttgaagttcaattgtgattttaccctcgttttttagggtttacatttttacccttgttttctttgaaacgaagaatagatttgcccctactttggatggttgggttaacggtgttaagttgagtaccaaaagacatttatatccttgcttctattgcagatttgcccgcccttctgaacaaataattgtgtttttaccccttgtacatgaaacttggaactaacttgtacacaacattttcttgactaatctctcgttgtctcgcgatgctgctacatcctgctcatgtgctccactccaagctgtatttgcctgtccaaatgcttctctaactgcaaaaccaagttgatacatacatcaatattatagtttgtttgttcttaagatcaatcaagatgtgcacacaagaaagtatgtttggaagaaaaagagaaccaatagcatctggaagactgaagtaggaggcttactctgcacgcgtcgacaaccggccaccgtggcctgcttctcgtgtcgctgcgagtcaccactgccaattgctgctagcgtcgaggagatgtcgctgctgccttctgctcgtgaagccgccaacgcgccttgctgctcgcgtcgaggtgcgcttagaagcacatcgcatcgaggtgtgcttaggagccgccgccgcctgcttctcatgacactgccgaggagcggctgccagggcttgctgctcgcgtcgaggcatgctaaggagccaccgctgctgcctgctgctcgtgttgccgagctggctcgccggagccgcctccgccacctgctctttctcccctagagtttggggattccttggtgtggaagaacaaatctgaccaaacatatttactcaagggtagattgggaatcccatatttcctaaatattttttctcttttcatttatatttctttaactcgatattgtgtgaccaccaaactaccgtttaaagtaggggcaaacggtgacttcgtttagaaaaaaacaggggtaaatctgcaaaccctaaaaagtaagggcaaaatcacaattgagattgaaagtgggggtataaatacaattctcccttattttttttcctacattactttggttccttctttaactgtccatgttctagaaccatgagctagaaaatcactttttttttaactagtaccatttctactttcttagttcttcctttttccttttggttcatgtggttcggcttgcgttctgtctatagcctactccaacttggttgggcctaacgcctgatgattttattgtactttgtattcttctccaagtaagttatatggggtcagttgtccgcttagcacttgaatcaagctttatcacttggtgagcctggtcatcaccaaatcagttgacataaatgaaaaaaatttagtgtagttcagtgttatggtggttctggtattacaattctccttctttcgtatgccaaccgatgatgctgctcttcaaattctgccctgctcaactgcattttgagttaagctattatattttaggataaattgcagtcagtacatgcttacatgcacacctcataacacaaaatgaaaattttgatgtgttacaggtgggcctgtcgtatatgtgatatgagctcaggacgtttaaggccatgtgacttcaagtatactaaactattagcttctcttcaaactttcagatgcacatataattttgagataaggtactgcttttcgaattctgacacatccttagatccaacaattcttgtctactttatgtcacaaagctagaaaaacaccattcgatgaagtgttctggactatcaaacattaaagatacataaaaaatcaactatgcatatcagttttaatgtgttacatgcactttagttaatccatgcatttggcaatagtacatttccctgtactgcaatgagatcccttctgtcgcattctgactgatgataatttgcattgcatactgccatagactgccagttgttcaagctgagccttttaagaaggttatttcaaaggcaatcagtcatctcacgaagcaagtgcagaatgccaaagctttgattgatggagtcctggtatttacacagcttcttagcccttattcagctggagaagtgaaaaaaaaatactacgagtcagaataatttgcattatctcttagaattttggagtcctctagttttgtttgtgtttgacatcctctcatagttatgatgtattttcaactagtttttggatgacatggacaacactttggaggggccacataacgttgaatttcttgtgcctttcaagaacaatttgccggctgaaggtgccctagctaatgctatttcctattatatgtgatgatcagtttctctctatgtcattatgggagccttatggtaaatgcttgcactaaagaatgcagtttagagggtgttgctgggctacttctctttgctggatctgtcagcgccttggcatacttgggcccaaaagagtccattgcagaagttatatctgatctaaaggtagatataatatactaatttccattatttatcactgcaccttgtcactttttcccatgatggactagccagaactttataaccaccttcacatgctaagcttctatgattgaatctgattgattatcaaggaagtggcaatgcatttagtggtgaaaatgtgagcaggctcttcagttaggatttcagcactggattgggaatttcaagaatctcatcctggaaaaaaatactgaaacttgagttgtgactgtaatgtagctatatgtcttgagttaaggagctttatggctactggaattttgattctgaggtacttggcactgccgtattatttttttaaagatgggattcccttatatggtactgaatagtgaataatgtccaaagggttcatatcatgaatctcccttgcattggttgatttctagtcccaagcatcgttttatagaactactcgaacactcgtcgctgttcagcaaattaattaatgctttgtgctgtctgtcgacctgtgcgtattcagttggacatcatcacaagcctgagaagcagattggatatcatactagatgaggcagatgatgactctactactaacaatttggagaattcactgtctcagaaggccacccaagttgtttttcatgagttgaggtacttcatatcttccatgagacatttatattttgtagtgaatcaaagtacacaaaccatatcttacattttcacgaagtcaggcctgttcggtgttatggtccaatggaacatatcttgatgatttaaattaaagcattaagatttcctgtatttacaatagaacaacagatatgttgctattgtatgcagctgattacatccttcttttcgcatacagagtaccttacagtttcccattccctagaagaattctgataccttggttggctggctcctatatttgtgactacttgcaacaatcagaaacaacggaggtatttgttttttcatgtagctaatctgaatgcacagggggccttttaattgtcttaattgtcaagcctattatattccaattcttctagaacacattattcttatgtagtactccctccatctcataatataaggtattttctccttcaaatttatcccaaaacataagggattttaggattcagggacaatactttattctccacctaccaacttttatgcactctactttattctccaccatccacttttatactagtttattccccaatctaccaacttttatactattttattctttcacctcaccttttgtaccatcacgtcattgcattacttccttaatttttaccaaaaaaatgacataatcccttatattatgggacggagggagtagtactttatatgttgttcgctggttggtttgtggtgagtatgttagtttgtctaacatatccacaatcggctagaataaatgataaggtttggtttggctgcttgacacccttatgtgtgacatgtgcaggatgccatggagcgctgcaaggaagtgatgtcgcttgaagcagatatgggaaactattcaatcgtagaaccagaaagtgcatcggctgccacgctaggatcgttttgggatgtggtacctggagctttgtcaaaagcgccttcagagcctggtctgaaagagatgaactctggacagaatggttcgaggaagacgcatggcagcagtttcagcattctaatggcgtttgtagtactactgattgccgtgttggttggatgcatattcacattgtctgccaccttgaagacctgatcatgtaaaatcgaccgagatggcatattttctgttttgtccagaaagaattaactcctggtgaatgatgaagaaaatagatcgctaaaaatctgatattcttgtggggtgttctacaattatctatcttgtgtgacagctgtgggtgaaatctaattaatgcccataactagctattaacagttgaaaccgttgcatttttcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0188900, RefSeq:Os10g0188900