Os03g0284600

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0284600| Description = Thioredoxin fold domain containing protein| Version = NM_001056298.1 GI:115452324 GeneID:4332468| Length = 2975 bp| ...")
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Gene Name

Os03g0284600

Description

Thioredoxin fold domain containing protein

Version

NM_001056298.1 GI:115452324 GeneID:4332468

Length

2975 bp

Definition

Oryza sativa Japonica Group Os03g0284600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9839536..9842510

Sequence Coding Region

9839612..9839780,9839862..9840012,9840105..9840150,9840531..9840590,9841076..9841112
,9841825..9841904,9841982..9842073,9842170..9842230,9842366..9842425

Expression

GEO Profiles:Os03g0284600

Genome Context

<gbrowseImage1> name=NC_008396:9839536..9842510 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9839536..9842510 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgcgcgcgccgctccccgtaccgcacgcggccgccaccagcccgcgaccggctgcggcgtcgagcctcctccgcgcgaggggcccgtgcgcctccctcctctacccgcgccgcctccgcttctccgttgcgccggtggccgccgccaagcccgaggccgtcgggagggccggggaggcagctgcggcgccggtggaagggctcgcgaaatccctgcagggggtggaggtgttcgatctgagcggaaaggcggtgcccgttgttgatctgtggaaggacaggaaggccatcgttgcgttcgcccgccattttggatgcgtgctgtgccgtaagagggccgatcttctcgcggctaagcaggatgcaatggaggctgcaggggttgctcttgttttaatcggaccaggtactgttgaacaggcaaaggcattttatgaccaaaccaaattcaaaggagaagtatacgctgatccaagtcactcatcatataatgcccttgaatttgcatttgggctgttctcaacgtttactccatcggccggtttgaagattatacagttgtacatggaaggatacaggcaggattgggaactgtcgttcgagaagaccaccagaacgaaaggtggatggtatcaagggggcctacttgttgcaggaccaggcatcgacaatattttgtatatccacaaggacaaagaagcaggagatgaccctgacatggatgatgtcttgaaagcttgctgttcctag</cdnaseq>

Protein Sequence

<aaseq>MAARAPLPVPHAAATSPRPAAASSLLRARGPCASLLYPRRLRFS VAPVAAAKPEAVGRAGEAAAAPVEGLAKSLQGVEVFDLSGKAVPVVDLWKDRKAIVAF ARHFGCVLCRKRADLLAAKQDAMEAAGVALVLIGPGTVEQAKAFYDQTKFKGEVYADP SHSSYNALEFAFGLFSTFTPSAGLKIIQLYMEGYRQDWELSFEKTTRTKGGWYQGGLL VAGPGIDNILYIHKDKEAGDDPDMDDVLKACCS</aaseq>

Gene Sequence

<dnaseqindica>77..245#327..477#570..615#996..1055#1541..1577#2290..2369#2447..2538#2635..2695#2831..2890#ctcggcgcggccacagccgcagaaccacacctaggccgctcgaagacccacgtagcttccatccaagcttaccgccatggccgcgcgcgcgccgctccccgtaccgcacgcggccgccaccagcccgcgaccggctgcggcgtcgagcctcctccgcgcgaggggcccgtgcgcctccctcctctacccgcgccgcctccgcttctccgttgcgccggtggccgccgccaagcccgaggccgtcggtaagcctcccggccccgctcctccttcctcccctcgcgtgcatggtgctgaaccgctgatatgcgcgatgatatttgcagggagggccggggaggcagctgcggcgccggtggaagggctcgcgaaatccctgcagggggtggaggtgttcgatctgagcggaaaggcggtgcccgttgttgatctgtggaaggacaggaaggccatcgttgcgttcgcccgccattttgggtgcgattgccactctgccgttttttcccaattatttgtcctgctttggacgattgagtgagtttgagacgattgatgctagttgtttgcagatgcgtgctgtgccgtaagagggccgatcttctcgcggctaagcaggttagtttagtggccgattcctccctgcaaatttcgaggaacaaaggaaatacatcaaatgctcaaagtgatgcattcttctaaaaaaaagggttactcaatctaccaggttccatttacaaaaacataaaatgttttcatttcagatgctatgaattatacctgctaagttgatgtttcagtctcttcatggaatccatgcaactgtaccttgtctagtggtagtttgacaatgcataaagcttttctaatctaattaatgtgaaatcatatgaaatcagttgcaaattcattagtttctgtagctttcgagcttttcataatattatgttgaactctttttcgtccatctaatctttagtttcaccacttacattcaggatgcaatggaggctgcaggggttgctcttgttttaatcggaccaggtactgttgaacaggtattgctctacgcctctatggcgaaagcatatcatcgtttctttctgcggtttgatagaaaaagttggtgattttacaaaatataaggaaaacatgtgctttcctctacgcctgaagtaagtatgattgtgctatttaacctccatgtatgtattgtttgtgacctatttcatagggaaaatgtagttgtgaataatagatgatgtgctgtttgatttatgagcaagtttggtatgcagttgtctttgttggcctgtttcttttatattagtttggttgtcattctaatatagggtgatcctgtagttactttcaagttgaattactcctgtgcaaagcaagcttaggtgttccatgaggtgtggtacaacctctaaataataaacatacttaaaattgtgattatttatgtttagttagttatttaatggattccattcaagcatgtcagtggttaatgaaatttgcttatttcttaatccaggcaaaggcattttatgaccaaaccaaattcaaaggaggtaatcttcttgaatcatctctacttcagtccctatgacatctatgtctacaacaatgaataacaagcaagtatacacatgaaataaaatgttaagaaaaatattgaataaattgtgagtacctcatatttgtgatattattgattgaatttattctactccagtccttgtgacttctgtctatatcaatggataacatgcaagtatacacatgaaataaaatgttaagaaaaacattgactgtgagtacctcatatttatgatactattgattttagtgtatattcattctctggtatcctaaaagttgttcaattaggcctagaagtgtatacacttattttgtgcaatttgatttttaaagttcagagtcatccatgttgcatgcaattgcaaatgaaatcgcattacatagttcctgagatattggcatgtttagttacggttggattatctgtaactcaaaatttgtatgttgccaaatgccagttgctataaggtaaggtcagtcgatgtaacattttgtttcctagtggttgttcagatcgcattttcccacctttctagaaaatgtaaattgtctacatccctcagtttccttgaagtttccttgaagttatttgaatctgttaaatgtggattctgattgacattttgttgcaacactgcaactattatagcttgtataaccatgtgtgactatgcaatgcagaagtatacgctgatccaagtcactcatcatataatgcccttgaatttgcatttgggctgttctcaacgtttactccatcggtaactcctactggataaatttcccatcttgtgtagtttctgctcctcgacaaatacataaatagctgtatccacaggccggtttgaagattatacagttgtacatggaaggatacaggcaggattgggaactgtcgttcgagaagaccaccagaacgaaaggtggatggtaagttgcttgggtatttcttctgtttctctttagagtattgacctgttgtggccagaattcagatcgagtaatagagtttttatctttttttaggtatcaagggggcctacttgttgcaggaccaggcatcgacaatattttgtatatccacaaggttaattagcaagccggcctagttttcctattagtgattttagaatcctagtgttcttgaatcctcatttttacagcctacaatatgatggttacaaaccactgactgtggctttatgtttgaaccttttaacaggacaaagaagcaggagatgaccctgacatggatgatgtcttgaaagcttgctgttcctagatcactagtatcctatatcatttctgttaacctccagaccttgaagacacatgtaaatattttgccaagttaaagtatgttatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0284600, RefSeq:Os03g0284600