Os03g0285900

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0285900| Description = Similar to Splicing factor RSZ33| Version = NM_001056306.1 GI:115452340 GeneID:4332476| Length = 3194 bp| Definitio...")
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Gene Name

Os03g0285900

Description

Similar to Splicing factor RSZ33

Version

NM_001056306.1 GI:115452340 GeneID:4332476

Length

3194 bp

Definition

Oryza sativa Japonica Group Os03g0285900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9903476..9906669

Sequence Coding Region

9903677..9904130,9904263..9904358,9904460..9904659,9904797..9904892,9905011..9905050
,9905763..9905869

Expression

GEO Profiles:Os03g0285900

Genome Context

<gbrowseImage1> name=NC_008396:9903476..9906669 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9903476..9906669 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcgctatgatgatcattatggaagcacacgcttgtatgttggtagactgtcttcgcgcactcgttctcgtgacctagaatatcttttcggcagatatggaagaatacgtgaagtggagttgaagcgcgactacgcgtttattgaattcagtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatggaagccgcattcttgttgagtttgctaaaggagttccacgtggtgctgctggtggttcacgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggattgatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgtggagaaagaggtcacatagaaagaaactgccaaaacagtccaagaaatctcaggcgagagagaagttattcgcgctccccatcgccacgccgtggacgtggtcatggtcgtagtcgtagctatagccggagccggagcaggagttacagccgatctaggtccagatccctatctggatctcccaggggacgcagagatcgtgatgataggagatcaaggagtcttagctacagcagaagtcccaggcgatccatctccccagcagcaaatggaaaggagcgcaaccccagcccgaatggtaggcggagtccaaggagtccacaggatcgggtaagcccaccacccaaggataatgatgagcgcaatggtgacagcccctggggcagggagaacagcaggagcccatctgacggctaccgtagccctgtggctgccaatgggcgcagcccaagcccaaggaacaatggaagccctagtccaatggacaacaatagccgaagcccaagggacaacggcagcccgagccctagggatggaaatggtgatggtggtagccgtggcggctcacgctcgcccagagcaagcgagtcccctgaagcttga</cdnaseq>

Protein Sequence

<aaseq>MPRYDDHYGSTRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKR DYAFIEFSDPRDADEARYNLDGRDVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPGT GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPR RGRGHGRSRSYSRSRSRSYSRSRSRSLSGSPRGRRDRDDRRSRSLSYSRSPRRSISPA ANGKERNPSPNGRRSPRSPQDRVSPPPKDNDERNGDSPWGRENSRSPSDGYRSPVAAN GRSPSPRNNGSPSPMDNNSRSPRDNGSPSPRDGNGDGGSRGGSRSPRASESPEA</aaseq>

Gene Sequence

<dnaseqindica>2540..2993#2312..2407#2011..2210#1778..1873#1620..1659#801..907#cgtctcctcgcgagttcacccgcccgccgcctgcggcgatctccatccagcgagcagcggcgccggcgccggcgtaccgctgcttccgccgcatcctctatctctggtgagcgtccatcctcttcgccatccctccctgccaacacctttttctttttctcgaattcgcgttaaccctagcttctctgctagatctggaggcgtttctctttgccttaaccttgttatcactagtactaataacagtttgtttgttcctgaagaggatttggggtttcaactgaactcccccatgtcgcactttagatccgcccctgcgtgattgtatagtcacatggtgcttgggctccggtttttaatatctgctatatgttgatgctcatgcaacctataggattctataattgcattattttgattctttgaagttatatagaattgtatgtagatacgacgagtcagttctaagattactggctagacttggctgaactggttctttgtgaactttagtggttgcatatatgcttgttgatattgtctatgctgctatgagtgacaaggcctatccaatcatgtcttacctcatcctctaatctgattacccctaaatttgggtctatactgtatgtgtgcgttgtacttaccaagaacttttgttttgtaagtttttcctgcatgaaaaaaatattccctaactgtacaatgcatttctgcgcaagtattcatgctcttttcagtcattcatattcattagattttgaaaagtactgatgtttctttgcttttgttttcaggagatgcctcgctatgatgatcattatggaagcacacgcttgtatgttggtagactgtcttcgcgcactcgttctcgtgacctagaatatcttttcggcagatatggaaggtaagaacagaacaatgggcattaagagagcttatttctctgaagtataatggatttttctggtaaaattatgataagtcactttcatttggtgtaagtgtaaaacactagtgctgcgctaacgcttgcttaacagttgacattacaacttgttggtacgttcaaatttcaccaaacaaatcaagctgtttcctattaaaattgtgacctttccaaaatgtgggtgcaaatcttcggttgtgctcagcataggccagtaaagcaccatatccttcctaccctttcccattggccagctcatggcaggtcttgggttcagtggtaccataccgtctcttttcagctactttgtggacagagttccttcaagccattcagtgtgacattttctgttatttctttaagtatgctgtagaagtttgaccccccaggtcttgtgtgtttgacttgaatgatcttgttgaaggtttttcggttttttacacaacccgggaggtctgtggtggtctggtggaaggggtgcccttggtggaattggtggccattcttttttctccggaattggtgaccattcttccaaagtttgtcgaggactttggtgaagggtgcccttggtgtaatgttattgactgttttagtggaagttgcaagtcggtgatgcatttgagtacttgagtcatgatggcttactgtttggcaaccattggtgcagaatacgtgaagtggagttgaagcgcgactacgcgtttattgtatgtgaatacttccctcatttttttattgcgtaacttctctctttttaagttcttatgaggtgtattttgttcacatatgagtcctatattttgcgacatctattttaccaaacaggaattcagtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatggaagccgcattcttgttgagtttgctaaaggagtaagcagttctttggttgcattcctaagcacatcctgatactaatttattttcttccttcatgtcatgctgctgctgaattgattatctgtacttttgttggctctgatgttcttttcaaaaaattgtgcatgcaggttccacgtggtgctgctggtggttcacgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggattgatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgtggagaaagaggtcacatagaaagaaactgccaaaacagtccaagaaatctcaggtattgattgataccgttggtcagatacactgtagcactctgttctaaggtactatgtttgaattactcaagacttctccaatacgtacttggttttccaggcgagagagaagttattcgcgctccccatcgccacgccgtggacgtggtcatggtcgtagtcgtagctatagccggagccggagcaggagttacaggtatgcttcaaaagccacctgctcaaattattactctccatgctgtctgttcaaatcgcagatatgctattgttgacctggtacttgttttcccttggcctgattgttttacaatctttttgttactatcagccgatctaggtccagatccctatctggatctcccaggggacgcagagatcgtgatgataggagatcaaggagtcttagctacagcagaagtcccaggcgatccatctccccagcagcaaatggaaaggagcgcaaccccagcccgaatggtaggcggagtccaaggagtccacaggatcgggtaagcccaccacccaaggataatgatgagcgcaatggtgacagcccctggggcagggagaacagcaggagcccatctgacggctaccgtagccctgtggctgccaatgggcgcagcccaagcccaaggaacaatggaagccctagtccaatggacaacaatagccgaagcccaagggacaacggcagcccgagccctagggatggaaatggtgatggtggtagccgtggcggctcacgctcgcccagagcaagcgagtcccctgaagcttgaaatttaatcccagtctctggcgttcatcttgtggatggtcatgctatggttgtaatagttatatttccggtttaagacgagatcaaggagtcttaacacctgaaaggatttggtgcccttggggctatgctatattgctattggtgtgtaatggatcgatgaactttctattagcctgcattgtttttgcggtctggtatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0285900, RefSeq:Os03g0285900