Os03g0288500

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Gene Name

Os03g0288500

Description

Pseudouridine synthase domain containing protein

Version

NM_001056320.1 GI:115452368 GeneID:4332490

Length

4862 bp

Definition

Oryza sativa Japonica Group Os03g0288500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10032363..10037224

Sequence Coding Region

10032363..10032413,10032765..10032811,10032923..10033013,10033295..10033594

Expression

GEO Profiles:Os03g0288500

Genome Context

<gbrowseImage1> name=NC_008396:10032363..10037224 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10032363..10037224 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgttgtattgttgcgctttgcaggtggattaagaggattcgtgatggacagataacagtagatggtgaagttgccactgatccagatatgattctcagggagggttctaagttggtatatcatcgcttaccatggcaggagcccttcgcaccacatttacttgatgtgctttatgaggatgatgacatgatagcccttaataagccttctggcttgcaagttcttcctaaaggacttttccaacagcgtactgttttagcgcaacttcaattgaaagactggaagatgccttcatcattctgctcaaagcgaaaagatgcgcaatcacaccctgtacctgttcatagactcggaaggggcacatcaggtttgttcctctgtttttgttctgttcatgctcagaaaccttggagcattgacacccagttgagttccagtggatgtaaatttttgttcaccgaccatcaatcagtcaaactagtggtctag</cdnaseq>

Protein Sequence

<aaseq>CCIVALCRWIKRIRDGQITVDGEVATDPDMILREGSKLVYHRLP WQEPFAPHLLDVLYEDDDMIALNKPSGLQVLPKGLFQQRTVLAQLQLKDWKMPSSFCS KRKDAQSHPVPVHRLGRGTSGLFLCFCSVHAQKPWSIDTQLSSSGCKFLFTDHQSVKL VV</aaseq>

Gene Sequence

<dnaseqindica>1..51#403..449#561..651#933..1232#tgttgtattgttgcgctttgcaggtggattaagaggattcgtgatggacaggtaggtcatctagtaaaatagccagtactagtttgctcatgtgttctcttttttgtattatgttctaaataatttggctgagttagcattactaacaagcagaagtttttcatttctatctttgtctttctatatacataattcctttagttttacagtgaacatgcatctatttgctatggctcaccaacttttatggtcctcttaaagctattgtgtgtttttatacacatgcttatatgagcattcatttaattaacatgtataggcaaatgagaaagttttggactattaggctagatattttcccaactacgaccagaggctgaagctttgcttttttgtttgcagataacagtagatggtgaagttgccactgatccagatatgattctcaggtagctctatccactgattgtactgtcatagttatcttgcttaattttttgggcaacacattgtttccttcataaatgaagaccatgatgctatgatgctctattttacagggagggttctaagttggtatatcatcgcttaccatggcaggagcccttcgcaccacatttacttgatgtgctttatgaggatgatgacatggtatgtaaaatgaaaataatatccttgctaagtatgtgtggcaaacttttaggacatttctttccatctttcggcgttttaacaatcctagctgattcgcaagtttgaaatttaaaatactgtatggttttggcatacaaaacaagaataaggttacttgtctatggtttgtaaaatgaaaatgttagacctcagagttttaataccttggtctacttgtgaagagccaacatcaccaatcatgcataaaagtaatctttactcatgcctaattttttcagatagcccttaataagccttctggcttgcaagttcttcctaaaggacttttccaacagcgtactgttttagcgcaacttcaattgaaagactggaagatgccttcatcattctgctcaaagcgaaaagatgcgcaatcacaccctgtacctgttcatagactcggaaggggcacatcaggtttgttcctctgtttttgttctgttcatgctcagaaaccttggagcattgacacccagttgagttccagtggatgtaaatttttgttcaccgaccatcaatcagtcaaactagtggtctagtctaaaatttataaattgttcctgggcattaaagccaattcgcttcgacaccaaactagtttctcagaagagactgaaccatatgatataaacataaagtgctgctcataggacttgttcctctaatattataaacaacacttctgcagtgaaatgtgaattgcagaaagatgtttgttcactactgagaatcagcacaactgcacaagctcgtatgatttccttttttttcttcgtttcgttctagctttgggtaaaatccataatccccactccctcgtttgcatatctttccagtttgatgtttcaggctcaaatcatgtagtttaagcactgcagtcactgaaataattgaaaaaagtattcgtatcaatgaaacatgcactgaataacaacataattaagaaatagcatgaacatgtgtcatgaggtggaaactgcatacttaacctgtagcaaattttgcttaaatagaaaatgagataagtgagacaaaatgaaacagcaggtgacttatcaggagtttatggatttttcactttaccttttgatgactttctatctcacaatctatgtgttgtatcctaggtttactgctttgtgcaaaaacaaagcttgccaaagctcagcttgcagcttattttgctgaaggcgctacaaacgctggaaagagcaggtataaaactactctttttcataattcgaaaaaaaattcttgctattttttcatcttgtttaagatatttatagggatgaaacagatatttgcaaagcgcggaaaatttcaaagttctatcgagcactagtaactggtatccttgaaaatgatgaggtattgaccttcccccctcatttttgttatgggaaatttattgtttgctattacttagagggcatttcagcatttttttttcaccccttgtctataacacatggtgccctagggccacatagtcagtatgccactctagaggagttggaaaacgatcaaatttccctaaccacataattccaaatttccaatacgttgaattctgttctattcaatatcaagctatattcgcatttcttttgtttgtgaccatttgtccttccagatcagtcatgtgtaatattgttgtttatataaggcataatttgtttccaatgccttgtaggttatgattacccaacctataggattagttcgttatcctggtgtcgcggaggggctttatgcagcatgttcctcaggttattgcactaccacattactggtctaacattgaattggcgaaaaggccaataaggagtaaaggatgagtttagtacttctgatgatgcagttcatactgaggaaagcataatcattatttcatatgcattattttttggactgttttttttttcagggaaaccagcaatgagcaaagtgcgtgttcttgagagacttaaaatccataatcatacattgatccaggtaatatattactttcttttttgaaacatatgtagcactatccatgttggtcgattgcatatgccatgacaaaatattgcatttttctgtgtcatcatctgatatttgtttcgttgattgatgtaggttgaaattcattcaggacgcccacaccaaattaggatacaccttgcatacattgggcatcctcttgtaggtaactctcttgctcgagtaattttacggtccttgaggaggtacctcatagaattgctcctcttgctcactgagttgctgttggaaagtccgccatgttgtcagaaaggcacttgttggattactgcgtcctcaaaatagtacttgcagcattgacctatcatcatcatcatcatcattatgatagacacagattcatttaaataagagtaaattgcattagcggtacataaacttgtcaggtgcgtgcaatttagtgtatgaacttataaaatgcttgttttggtgcatgaacttaacttggtacgtgcaaactaagactaaaatggcgcgacaagaccgatttttctatgttgaacattataaattacaaattagtagatgacttgcatgtacataaaggttatatttgtaaacttagattccactttatctttctttgtttctgtcccttgcatcattactcagatttttatttttttatgcaatcattatgccttattatatgtttatccttcttagactaatgtttacataaagtttaaatcaacaacaaaatcagcaagattaaccttgcagtgcgattttgaccttgttcgcatgcaccaaacaagttcgtgcaccaaaacgagcgttttacaagttcatgtactagattgcacctacctgacaagtttgtgtaccaccgatgcaatttactctttaaataaacatatattttggataggtgtgaagggtttctcatgcgatcttttcttttcttgaatccacgaacagatgaccctctatatggcattggtggtcagccaaaatttgatgaaccagaacctactagtacagctgattcttttgcatatgatgggtaattccttcatccttcatttttgcttaaggcagtacgtctgatgcctttgtttaagatttgcatatgaattcatatctttgcatttagtttaactcactttcttgctcttgttagaggttatgagagacctttgcaacctgtccctggagattgtgggtaccacctacatgcacattggctagttctttgtcatccaactacaaatgaggtactgtaaaatgaatcatattgaatttgggtgctattctctacctgactcgtacaatagctttcaatcccaggaactggggttaaattcatatatcgaaggtggggaaattacatattccgttgtttattggtggaaagacataattagaatatgatagtagggcccaaatttgtagtagaatagtgagcctcattaagttgcaagcctgcaaaatatattttccaaaaaaaggaaatacagctcgctccttctattaaaacttgggcctgaataaagcagttgggaggtgatattcaatatgctggacactgtacgcgctaagaattggctattgtacatcaatatattcccgaagataatggttaacgataagcattcatgtaattgaggactagcacttataaaaggacaactcaagatccagaaacctaaaagtgaccttcaatgttgcgtcctgactggaatcattgtaatcgctctattccttgcttagcttacactcatcataattttcttagcagatgatcaaaatcacagctcctctgccacatatcctacagactagagaggaacagcaagatacagctaagctactcggtggttgaacccttcaattttcatggtcagcttgagttcacaggctccagtgaagcagggcaccctatacaacaaaaaaaccaagtgaaaacttcaggttctgtactgggcaatggccatctattgctgcaaaacccatggagatggacgccgattgatactcctgtccacctgtgggtgcgtgctttgcgactagctaaccactgaacgctcccaagggctagttttttaatataatattttgatattttctattgtatggtcaaaatcaagaattgatctcagtaagtactcttttcgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0288500, RefSeq:Os03g0288500