Os10g0190500

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Revision as of 08:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0190500| Description = Protein of unknown function DUF594 family protein| Version = NM_001070810.1 GI:115481363 GeneID:4348234| Length = 39...")
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Gene Name

Os10g0190500

Description

Protein of unknown function DUF594 family protein

Version

NM_001070810.1 GI:115481363 GeneID:4348234

Length

3949 bp

Definition

Oryza sativa Japonica Group Os10g0190500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5953248..5957196

Sequence Coding Region

5953533..5953886,5954449..5955849,5955921..5956268

Expression

GEO Profiles:Os10g0190500

Genome Context

<gbrowseImage1> name=NC_008403:5953248..5957196 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5953248..5957196 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaattcggaggggtattgcagttgtggaatgaatggggggtacagatgctggtcctagcaagcttcgcgttgcaggtgttcctcctcatcttcggagggatccggcggcacagctcctcctccgtgctgatgttcttcctctggtcggcgtacctgctggccgactccacggcgatatacaccctgggccacctctccgtcgacggcaggtccgacgagcacgagctggtggcattctgggcgccgttcctcctgctgcacctcggtggcccagacaacatcaccgcatacgcgctcgaggacaacacgctttggttgcgccacctgcagactctcgccgtgcaggttctaggagctgtgtatgtgatttacacatacattgtcggcagcgggaccgatcttctgatggcctcagtctcgatgttcatcgccggacttctcaagtacggcgagaggatatgggcgctcaaatgcggcaacatcagcagtatccgcagcagcataagcaccagaaagttcaagactgacccttacgagttgctggcattgggtaccagcgaagaggagctgctgcttggagcccactcccaattcgacatctgcaaaggcgtctttgccgatatcataatgctgccaaatccgtcgctcctctcgcgatccaaacggcgatcggtgatatcctacctggggatggatctgtacaagctggtggagatggagctgtccctgatgtacgacttcctctacaccaaggcagcggtgatccacacatggtacggcttctgcatccatttcgtctcgttgttcggcacggccaccacgttcctgctgttccagctgatcatcagcagcagcagaggagatgggtacagcagagaggatgtggtcatcagctatgtgctgctggttggggccttggtcctggagatcatatcagtgtgcagggctgtgctatccacctggacatgttctctgatgcaccggaggggcagggcatgggagtggcctctccacattatcacatcctttagccgccgtgtccacccggcaagccggagactctggtcaggctcaattgggcagtacaatctgttccacctttgcgcccgcaacacgaacgagattgggagtaggttggcaaccagattggggctccaggactggtggaacatgatgcacttctcgggcaccttctcgaataccggctctttctcaatacaagatctcaagaaactggttttgcaagcactggaagagaaagagcgagcgctgcaatacaaggataccgacctgaactccaggggcagcttcatactcaagagtatgaaggcctatgacgactttgcccgatggagcgtcaacatcgacttcgacgagagcatccttgtttggcacatcgcgaccgagctgtacatccggagatccaaggccaggcacgcgaaagagctcgttgaggctaccgaggtgctgtccaattacatgatgtttctgctggtggtgaagcccaacatgctgcccggtgctgcacgacacaacatacatctcccctcctgtgaacagatagaagggcattgtcgtatgggctttggtggtgagaaggataacccggtggcggcatcgcccataagctggaacccatactgtatgctcaaggaattgctccaccatgatggccctagttgctcaagtatcccacggagggagaagctcgcggagatcgtgtggagtttctgccaattcgcactgggatcagtaaaggcaccaaatccacacggcgaatccatccgcgacagtgcaaacatgtactcggtgttgctcgccaacgagcttctcggcatcgagtcgcggtggtgtgagcagcgtgacaccttggaactcatcctaggggtgtgggtggagatgttgctgtacgctgcgaaccattgcagccaggagtcgcatgccaggcagctcagcaatggctgcgagttcatcaccatcgtgtcgttactagcacaccacttcaagtactactctggagcatccaggggcgcggacgagctgtatgagagtaacccttcaatgagaacggtgagaagttggtctagatccctttcttaa</cdnaseq>

Protein Sequence

<aaseq>MEFGGVLQLWNEWGVQMLVLASFALQVFLLIFGGIRRHSSSSVL MFFLWSAYLLADSTAIYTLGHLSVDGRSDEHELVAFWAPFLLLHLGGPDNITAYALED NTLWLRHLQTLAVQVLGAVYVIYTYIVGSGTDLLMASVSMFIAGLLKYGERIWALKCG NISSIRSSISTRKFKTDPYELLALGTSEEELLLGAHSQFDICKGVFADIIMLPNPSLL SRSKRRSVISYLGMDLYKLVEMELSLMYDFLYTKAAVIHTWYGFCIHFVSLFGTATTF LLFQLIISSSRGDGYSREDVVISYVLLVGALVLEIISVCRAVLSTWTCSLMHRRGRAW EWPLHIITSFSRRVHPASRRLWSGSIGQYNLFHLCARNTNEIGSRLATRLGLQDWWNM MHFSGTFSNTGSFSIQDLKKLVLQALEEKERALQYKDTDLNSRGSFILKSMKAYDDFA RWSVNIDFDESILVWHIATELYIRRSKARHAKELVEATEVLSNYMMFLLVVKPNMLPG AARHNIHLPSCEQIEGHCRMGFGGEKDNPVAASPISWNPYCMLKELLHHDGPSCSSIP RREKLAEIVWSFCQFALGSVKAPNPHGESIRDSANMYSVLLANELLGIESRWCEQRDT LELILGVWVEMLLYAANHCSQESHARQLSNGCEFITIVSLLAHHFKYYSGASRGADEL YESNPSMRTVRSWSRSLS</aaseq>

Gene Sequence

<dnaseqindica>3311..3664#1348..2748#929..1276#gcacgcctacacccagccgccgagacgaggaggagcagcgcagaaagttttcgctcttcgatcttccgcccaagttcttcgctcgcatcctccatcggtcttctcttcctagctttctgatggaacgaaggtaagtacgtacacatctcttccatcgccatgcttcgattcctatcctactcatcgattattctgtttttctttcgatttttcgattctgtttttcattttttagattgcaagcttttcgttttcttgtaccaccacgtgctaattcaagggaagcgttaaatgtacgccaaccttctctttcttctccgtttcaaaatgaaagtaatctcttcgtttatactctgctccatgaattgcttgcaggagtataaacggcttggcagcaatgcaagctgagtgaaagaggaggtatggaaaaacttgttccagggcaatcttgacttcacacattggaccaaatggtgccaagccatggccggcctgcttgtacctgcagcttgaggaatccagaaagctcgccaatttgactcccacgtatgttcttttctcctccacccttttgttaccacccctgtccttttattattaacagtcacggcaagcaatctatgcttgtgtgatgcgaggttcatatcatgtttaataatgggtaagtgtaccttagttcaatgatcgaataccccggataagtttgatgatagtaaataaatacttggttcatcgaatcagtttgaatcagtacaagttttgagtatttattcgtacaaagatcccgctacacattcagtcactttgcatatattccctgcatgtacacaacactcaacacatataaagatttaatgagcacaacatttgctaatattattgagttctttgacatgctactgtaggcattttgagcagctgagcaacaatggaattcggaggggtattgcagttgtggaatgaatggggggtacagatgctggtcctagcaagcttcgcgttgcaggtgttcctcctcatcttcggagggatccggcggcacagctcctcctccgtgctgatgttcttcctctggtcggcgtacctgctggccgactccacggcgatatacaccctgggccacctctccgtcgacggcaggtccgacgagcacgagctggtggcattctgggcgccgttcctcctgctgcacctcggtggcccagacaacatcaccgcatacgcgctcgaggacaacacgctttggttgcgccacctgcagactctcgccgtgcaggtttttttttattgaattcagtcaattacatcaaagtgatacaaccgtctgagagtacactcctggtgcaggttctaggagctgtgtatgtgatttacacatacattgtcggcagcgggaccgatcttctgatggcctcagtctcgatgttcatcgccggacttctcaagtacggcgagaggatatgggcgctcaaatgcggcaacatcagcagtatccgcagcagcataagcaccagaaagttcaagactgacccttacgagttgctggcattgggtaccagcgaagaggagctgctgcttggagcccactcccaattcgacatctgcaaaggcgtctttgccgatatcataatgctgccaaatccgtcgctcctctcgcgatccaaacggcgatcggtgatatcctacctggggatggatctgtacaagctggtggagatggagctgtccctgatgtacgacttcctctacaccaaggcagcggtgatccacacatggtacggcttctgcatccatttcgtctcgttgttcggcacggccaccacgttcctgctgttccagctgatcatcagcagcagcagaggagatgggtacagcagagaggatgtggtcatcagctatgtgctgctggttggggccttggtcctggagatcatatcagtgtgcagggctgtgctatccacctggacatgttctctgatgcaccggaggggcagggcatgggagtggcctctccacattatcacatcctttagccgccgtgtccacccggcaagccggagactctggtcaggctcaattgggcagtacaatctgttccacctttgcgcccgcaacacgaacgagattgggagtaggttggcaaccagattggggctccaggactggtggaacatgatgcacttctcgggcaccttctcgaataccggctctttctcaatacaagatctcaagaaactggttttgcaagcactggaagagaaagagcgagcgctgcaatacaaggataccgacctgaactccaggggcagcttcatactcaagagtatgaaggcctatgacgactttgcccgatggagcgtcaacatcgacttcgacgagagcatccttgtttggcacatcgcgaccgagctgtacatccggagatccaaggccaggcacgcgaaagagctcgttgaggctaccgaggtgctgtccaattacatgatgtttctgctggtggtgaagcccaacatgctgcccggtgctgcacgacacaacatacatctcccctcctgtgaacagatagaagggcattgtcgtatgggctttggtggtgagaaggataacccggtggcggcatcgcccataagctggaacccatactgtatgctcaaggaattgctccaccatgatggccctagttgctcaagtatcccacggagggagaagctcgcggagatcgtgtggagtttctgccaattcgcactggtatggactgtggcgccaacttcattcttactgttcaaaaatctatttgttagtcttggaacaacgtcccaactcccaagttctggcttatttcactgtttgcaatttcagttcgtaggtataccttcgattgcaattcaactgaaactcatgtcgtcagtagatatatttgagactaaaaaagatcctgacaagtttaatttcgtttttatactttctgactttactgagtctacctaaattgcacctgaaaaatagcatttccagtttgattttatttgagcgaattctcttacttagtcgaaattgctgacattgtttcctcaggcaaactcatcattgatttcagtagactttgttggttgaaatgaagtcaggaaacagagttaaacataactttcaatatgataccacacaaatattaaaatgtgcactactttacatccacttatggttaaaatagacattgctagtctacccctgaaattctaaaaggagcatacatactaacacaaactattttgcactatttttttttactaattgccctcctctgtctcagggatcagtaaaggcaccaaatccacacggcgaatccatccgcgacagtgcaaacatgtactcggtgttgctcgccaacgagcttctcggcatcgagtcgcggtggtgtgagcagcgtgacaccttggaactcatcctaggggtgtgggtggagatgttgctgtacgctgcgaaccattgcagccaggagtcgcatgccaggcagctcagcaatggctgcgagttcatcaccatcgtgtcgttactagcacaccacttcaagtactactctggagcatccaggggcgcggacgagctgtatgagagtaacccttcaatgagaacggtgagaagttggtctagatccctttcttaatgaaattggtcgtactgaatctttcggccgacccggcaaaagaagttggtatagatgaattctatcaacggtttcgctctttcctctagtagaagcagaggattcaacacttccatccatgtaaccaaccgttgttatctcgttgttatcggtaaacaaacatactccctctgtcaagaaatgtaagcattttctggctatgcgcttggacaaaatgcttatatttgtggatagaggcggtaattattgggatatatagagtaacacaagttggaagattacttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0190500, RefSeq:Os10g0190500