Os03g0288800

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0288800| Description = Conserved hypothetical protein| Version = NM_001056323.1 GI:115452374 GeneID:4332493| Length = 3928 bp| Definition ...")
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Gene Name

Os03g0288800

Description

Conserved hypothetical protein

Version

NM_001056323.1 GI:115452374 GeneID:4332493

Length

3928 bp

Definition

Oryza sativa Japonica Group Os03g0288800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10045580..10049507

Sequence Coding Region

10045807..10045997,10046105..10046160,10046452..10047302,10047405..10047603,10047803..10047982
,10048148..10048524,10049182..10049322

Expression

GEO Profiles:Os03g0288800

Genome Context

<gbrowseImage1> name=NC_008396:10045580..10049507 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10045580..10049507 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttccagcagggcggcgggggcggttgcggtggcggcaaggcgcgggacaagttctcggtctaccggaacccgtccctcgcccgcgcgctcgcctcccgcagcgtccgcccctccctcccggtcctcgtcctcctggcgctgtcccccatcgcctccgcctcctccatcctcgtcctctcctcctgggaagggcagctcgtgaaggtcgccggccgcgtgggcctctccatggctgctgccgtgcttgtctttaggttgattgaggcagcgctgggtctggtcgcactttttacactgccggctttcttcagggcggtgatgctctacaatgggaagagggcacttgccaaagaggacaaggttgtgttatctgaacgccaactggggcttctcgggttaaagatgacaggttcagaagcaggtggcaccagtgagaaaaccaaaaggcctcccaaggcaaagccatcgactccgtcagagccaattgttccgattaggaggtcttcgttcagctatacgccatctcggtctttagggcaatcaaggattggttccagcaatttgagccctggtggtgagagactgaccacatcagtgcaaatatcaccttccactccactacaaaagcctatttcttcaccttcaaccccatggtctaggaaaagctcaggcagtgcgaagggcatacagacagaggcgatgttggagcagttcttggctggtttggacgaaaatattgacacaatcacagattcagccagtaagattgcaacacctcccgcaaccattacgagctttggtgctgcaagccctgtatcagtcattacatcaaccaccccttctggtgctgcaagaagcacacctttgagggctgtgaggatgtctcctggctcccatcagaagtacagcacgccaccaaaaaaaggcgagggtgagcttccacctccaatgtcattagagcaggcagtgaatgcctttgaaaatttgggtgtataccctgagattgagcaatggcgagataatctcaggcagtggttctcttctgttttgatgaacccacttgtccaaaagatcaaaactagccatattcaggttaagcaaacaaccgctactgttggggcttcagttactgttagccaggttggaagtgatcttccaagcacaacagcgccggttggcttatctccacttggtgggactaaagattggcaaccgactatcacggttgatgaagatggcattcttaatcaattgcgcactgcacttctgcattcccgtgatacgcctgttgcacaaacctttggcagtccacaacaaccacaacagaatcccctccttccgtctattcaagcatgtattgatgcaattacggagcaccagaggcttaacacactgatgaagggagagctgataaaaggcttgctaccacagagtagtgtccatgctgattacactgttaagagagttcaagaacttgctgaaggaacatgcttgaagaattatgattatatgggtcatggagatggttgcggtaaattggagaaaaagtggatcagtgaactgccaactgactcgctccttcttctgtacttgtttgctgctttcctcgaacacccaaaatggatgcttcatgttgatcctacctcttactctggtgcccaatctagcaaaaatcctttatttctaggagttcttccaccaaaagagaggtttccagagaagtatgttgctttgatttccggcgttccagcagttattcacccaggtgctcttatactggctgtgggcaagcagagtcctccgatttttgctctgtactgggacaaaaagttgcagttttctcttcagggaagaacggcattgtgggatgctatcttgcttctgtgccaccaaataaatgttggttatggcggtgtagttaggggaatccacataggttcttccgccttgaacatcctgtcagttcttgattcagacatggaaagctga</cdnaseq>

Protein Sequence

<aaseq>MEFQQGGGGGCGGGKARDKFSVYRNPSLARALASRSVRPSLPVL VLLALSPIASASSILVLSSWEGQLVKVAGRVGLSMAAAVLVFRLIEAALGLVALFTLP AFFRAVMLYNGKRALAKEDKVVLSERQLGLLGLKMTGSEAGGTSEKTKRPPKAKPSTP SEPIVPIRRSSFSYTPSRSLGQSRIGSSNLSPGGERLTTSVQISPSTPLQKPISSPST PWSRKSSGSAKGIQTEAMLEQFLAGLDENIDTITDSASKIATPPATITSFGAASPVSV ITSTTPSGAARSTPLRAVRMSPGSHQKYSTPPKKGEGELPPPMSLEQAVNAFENLGVY PEIEQWRDNLRQWFSSVLMNPLVQKIKTSHIQVKQTTATVGASVTVSQVGSDLPSTTA PVGLSPLGGTKDWQPTITVDEDGILNQLRTALLHSRDTPVAQTFGSPQQPQQNPLLPS IQACIDAITEHQRLNTLMKGELIKGLLPQSSVHADYTVKRVQELAEGTCLKNYDYMGH GDGCGKLEKKWISELPTDSLLLLYLFAAFLEHPKWMLHVDPTSYSGAQSSKNPLFLGV LPPKERFPEKYVALISGVPAVIHPGALILAVGKQSPPIFALYWDKKLQFSLQGRTALW DAILLLCHQINVGYGGVVRGIHIGSSALNILSVLDSDMES</aaseq>

Gene Sequence

<dnaseqindica>228..418#526..581#873..1723#1826..2024#2224..2403#2569..2945#3603..3743#gaagcgcaaagtaccggttggctcctactctggtttctggcttctgggacggcctcgagtccgccgctgtctgtctccacctttgccccccatcctaaaatttcgaacgcagccatggccgcatagcccttcgccccaagttcaaacacctcgctctctctctctctctctctgcccgtacactcggcgcatcgcctcctcaggcggcaacagcggcggcggcggcgatggagttccagcagggcggcgggggcggttgcggtggcggcaaggcgcgggacaagttctcggtctaccggaacccgtccctcgcccgcgcgctcgcctcccgcagcgtccgcccctccctcccggtcctcgtcctcctggcgctgtcccccatcgcctccgcctcctccatcctcgtcctctcctcctggtacgcgtcgacccgcatcgccgccgcttctccatcttctaaaccctaaacccccagatcgcagcagatgcgttgggtactcattttgtttgtggctgtaatgctagggaagggcagctcgtgaaggtcgccggccgcgtgggcctctccatggctgctgccggtaagctcgcctgtgtccctgctgggtcgagttgggcgtgtgcgtgtcggcgctgtgctttgttttggtcgctcgtcaggtgcttgtaaaaatgccaagcatgtctaactacggtgcatcgcacggcagatgtgtgctgaaatgctttctcttccaacagctctaatagttgtaaataaaaacttgcatgttcaagttcatttaacatggactgggtttttacatttggattatggtggattttgttgtgccagaggtgcctacaaaatgtaacttgctggtttgtttcagtgcttgtctttaggttgattgaggcagcgctgggtctggtcgcactttttacactgccggctttcttcagggcggtgatgctctacaatgggaagagggcacttgccaaagaggacaaggttgtgttatctgaacgccaactggggcttctcgggttaaagatgacaggttcagaagcaggtggcaccagtgagaaaaccaaaaggcctcccaaggcaaagccatcgactccgtcagagccaattgttccgattaggaggtcttcgttcagctatacgccatctcggtctttagggcaatcaaggattggttccagcaatttgagccctggtggtgagagactgaccacatcagtgcaaatatcaccttccactccactacaaaagcctatttcttcaccttcaaccccatggtctaggaaaagctcaggcagtgcgaagggcatacagacagaggcgatgttggagcagttcttggctggtttggacgaaaatattgacacaatcacagattcagccagtaagattgcaacacctcccgcaaccattacgagctttggtgctgcaagccctgtatcagtcattacatcaaccaccccttctggtgctgcaagaagcacacctttgagggctgtgaggatgtctcctggctcccatcagaagtacagcacgccaccaaaaaaaggcgagggtgagcttccacctccaatgtcattagagcaggcagtgaatgcctttgaaaatttgggtgtataccctgagattgagcaatggcgagataatctcaggcagtggttctcttctgttttgatgaacccacttgtccaaaagatcaaaactagccatattcaggtgctctgcttttggcaaattttgagctgaacttatacctctagtccaatttcagtggccagttgtcaccattttttaaatttgttttgccctaccttgcaggttaagcaaacaaccgctactgttggggcttcagttactgttagccaggttggaagtgatcttccaagcacaacagcgccggttggcttatctccacttggtgggactaaagattggcaaccgactatcacggttgatgaagatggcattcttaatcaattgcgcactgcacttctgcattcccgtgatacgcctgttggtgagtttctggtgtaacttaaacattttattgctgtggttttgcatgttcacattctaccaaaatgttttgcaccgagcactttgtactgtggttaaagatgatacactaagattcccccagatttaattttcaagtttggctagcatggatttacctacttgttacttgttagcaatgcttttttttttctgtgcagcacaaacctttggcagtccacaacaaccacaacagaatcccctccttccgtctattcaagcatgtattgatgcaattacggagcaccagaggcttaacacactgatgaagggagagctgataaaaggcttgctaccacagagtagtgtccatgctgattacactgttaagagagttcaaggtgaatgtcttacactcaccatgttatttcataatggcatatcatggagcctttagctgaaatgatatactagtattatattttctagcatatgttggagcgaattatgactgagaataaattttggcatgatttgcatactattcacattctatcatgatacagaacttgctgaaggaacatgcttgaagaattatgattatatgggtcatggagatggttgcggtaaattggagaaaaagtggatcagtgaactgccaactgactcgctccttcttctgtacttgtttgctgctttcctcgaacacccaaaatggatgcttcatgttgatcctacctcttactctggtgcccaatctagcaaaaatcctttatttctaggagttcttccaccaaaagagaggtttccagagaagtatgttgctttgatttccggcgttccagcagttattcacccaggtgctcttatactggctgtgggcaagcagagtcctccgatttttgctctgtactgggacaaaaagttgcagttttctcttcaggtgatttaaattttcattcatttattgctttatctagttttatcagcatcaatattcttatttctccttttgaggcaaagcatcaatattcttgtttttcctcctgacgtttgtatataaaccaactttctttttaaaagaaaaataagatgccatccataggcagttaaaggataagtcagagagaaacaaacccaaaagaaaggttgtttggtggcctgtgttgttcatttttgtgataatctgaagtaatcatcatagtatgtcaaaagagattgggaataggcacactgcagcaatcataacctgttttacctttcgcctgtgttgttttgctacaaacatgtgatttctaataataaacaaatgatttgagtctgatgactttagctcagactgtctggtggcagtgcacctaattggagtatatagcctctcatatttttgacaacttaacacattctgctagctaagcacaaaacatttgcataaagatataatccattatattatattagtttgacttgacttgtagtgaattgttggtttgtcgcacacttgggttcattctttgatggcactgttcttgcaagaactttttccaaaaaaaaaagtccagtattattaatgttattcccccctgcttggattttccagggaagaacggcattgtgggatgctatcttgcttctgtgccaccaaataaatgttggttatggcggtgtagttaggggaatccacataggttcttccgccttgaacatcctgtcagttcttgattcagacatggaaagctgaaggactgcgtgctgcttgcctgatatcacatcagcaggagctaaagatggttttgtagtttgtactttgaggagataaattatgatcagccagttgctgaatgtaaactaacaccagcatgcttcgaactaacctactgttagatctgatttgtcctggtgaagtgacagctgaatttgtgcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0288800, RefSeq:Os03g0288800