Os03g0288900

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0288900| Description = Conserved hypothetical protein| Version = NM_001056324.1 GI:115452376 GeneID:4332494| Length = 3099 bp| Definition ...")
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Gene Name

Os03g0288900

Description

Conserved hypothetical protein

Version

NM_001056324.1 GI:115452376 GeneID:4332494

Length

3099 bp

Definition

Oryza sativa Japonica Group Os03g0288900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10050301..10053399

Sequence Coding Region

10050398..10050425,10050522..10050639,10050743..10051385,10051703..10052492,10052571..10052608
,10052978..10052986

Expression

GEO Profiles:Os03g0288900

Genome Context

<gbrowseImage1> name=NC_008396:10050301..10053399 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10050301..10053399 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccccaccccaccccgttcgcagggaagcggcggtcggttgccgccgcgccggcgaagatagcggcgcccaagcccaagtccatcgcctccacgcgcacgaagacgacgaggaagtctcccccagcacctccaccgccacggccacggcgcgcgttcggcaccgttcgaagcagcaacgcgcatgatgcccccgagaagccgccgccgctgcagaaggctccaaaggtgtcgccgccgccgccgcagaaacctgataaggtgtcaccgccgccagctcagaagccctccaaggtgtcgccaccgccaccgccaccgcagaagtccgcgaaggtttctccgccgcctgcggcgaagcctccgaagctgtcgccgccaaatctggccaaggcgactaagccgtctcgtctggcagcaaagccccctaagaaagccgcgccgggaccggaactggatcccaagcccaggaagaaggcgcagcgggtgagcttccaggaggacgcggcgatgtcggtggcccctggaagcggagagaaggtgaaggtttccaccgatgacgcggctggtcacacgccgatggtggccgtgagagccctggagaagaaagtgagtgtcgtcgcgtccgcggagacgccgttctttagtgcgcagaactgcagcaattgcagtctcgacccgctcgaggagtccacctactggctcgcacatatccacctggccgagtcagttgggaagcacagggttgctgctgcgttctttcagcttgcattcgagtgccaagctcagccaattcacaggatccaaagtgagctaaggaattatacagtgcgccatgagagtgccagcactttaaccactttattcgatgagcttctccttgcccatggtggcatcccagtgaaccaacctaagtttgaaaccgatggttttgaggtggtggatacacctttaactacagatagtgatgacaagaggctcgatagtaccacaactcaagtggatgagagatgctcggaatgtgactgtggtggtgatatcgtcgatgtggcagttcccagtattgtgaaaccacttgaggaaggcatggaccaaccgagttttgagaggaagctgaacgacggttttgaatttgatgattgtgaagctgtcattgtggacaagctggtgggaggacattctgatctagagaagattgttgatgttaatggtcctagcgacagtgaaacaatgcagtcagcatgcagatcctccattgataggttaagcttgaaagggtctccagtagtaagcggattgtctcaaagacagctctcttcagacagtccattagataagttgtctccgtctgcacggagcttgtctgcaaagcgcttatcatctgttagcccgcttgacaaaaagtctccatttggtagcagctcgtcgaagaggctctcatccagttgcccttcttctaagaaatctttctccagtaaagccttgtcatccaagcggatgtcatctggtaatgcttctgctggagtcggtgatcttaacgaagtgattgcagatatggaatttgactgccctgcatcagatgatcagctggaactgaaagaacatggggattctgagatcaactag</cdnaseq>

Protein Sequence

<aaseq>MDPHPTPFAGKRRSVAAAPAKIAAPKPKSIASTRTKTTRKSPPA PPPPRPRRAFGTVRSSNAHDAPEKPPPLQKAPKVSPPPPQKPDKVSPPPAQKPSKVSP PPPPPQKSAKVSPPPAAKPPKLSPPNLAKATKPSRLAAKPPKKAAPGPELDPKPRKKA QRVSFQEDAAMSVAPGSGEKVKVSTDDAAGHTPMVAVRALEKKVSVVASAETPFFSAQ NCSNCSLDPLEESTYWLAHIHLAESVGKHRVAAAFFQLAFECQAQPIHRIQSELRNYT VRHESASTLTTLFDELLLAHGGIPVNQPKFETDGFEVVDTPLTTDSDDKRLDSTTTQV DERCSECDCGGDIVDVAVPSIVKPLEEGMDQPSFERKLNDGFEFDDCEAVIVDKLVGG HSDLEKIVDVNGPSDSETMQSACRSSIDRLSLKGSPVVSGLSQRQLSSDSPLDKLSPS ARSLSAKRLSSVSPLDKKSPFGSSSSKRLSSSCPSSKKSFSSKALSSKRMSSGNASAG VGDLNEVIADMEFDCPASDDQLELKEHGDSEIN</aaseq>

Gene Sequence

<dnaseqindica>98..125#222..339#443..1085#1403..2192#2271..2308#2678..2686#attcgtctccctcccccaatttcctcccattccaatcgaacgcctcgtctcctcacctcctcgtcttcctcgatctctcgtcgtcgtcgtcgtcgccatggatccccaccccaccccgttcgcaggtaagcaagcgtcaacttccgcaccaagacccccccaatggttacctctctctctctctctgttgacgagatcgatccattccgcgggttgcgcagggaagcggcggtcggttgccgccgcgccggcgaagatagcggcgcccaagcccaagtccatcgcctccacgcgcacgaagacgacgaggaagtctcccccagcacctccaccgccacggtaaggagatcgccggcaatccatattgaaaaatcctctgtaagatgtgtagcgcgactatggtttcgcactttcgcttactgaggtagaattttttttccaggccacggcgcgcgttcggcaccgttcgaagcagcaacgcgcatgatgcccccgagaagccgccgccgctgcagaaggctccaaaggtgtcgccgccgccgccgcagaaacctgataaggtgtcaccgccgccagctcagaagccctccaaggtgtcgccaccgccaccgccaccgcagaagtccgcgaaggtttctccgccgcctgcggcgaagcctccgaagctgtcgccgccaaatctggccaaggcgactaagccgtctcgtctggcagcaaagccccctaagaaagccgcgccgggaccggaactggatcccaagcccaggaagaaggcgcagcgggtgagcttccaggaggacgcggcgatgtcggtggcccctggaagcggagagaaggtgaaggtttccaccgatgacgcggctggtcacacgccgatggtggccgtgagagccctggagaagaaagtgagtgtcgtcgcgtccgcggagacgccgttctttagtgcgcagaactgcagcaattgcagtctcgacccgctcgaggagtccacctactggctcgcacatatccacctggccgagtcagttgggaagcacagggttgctgctgcgttctttcagcttgcattcgagtgccaagctcaggtgagagttaaatgaacatggtttttagttgataagtcaatctaaaatttaaactgtaagtatacgtgcattttatgttctggttattgtagatgtattagacattgtttctttttcttggaagaaattatgtttgtgggttttacctgaataaccaattgataggaacataaacactcgttgactgttcaagacttcaggcacaacctattgataggaaacatttcatttttatattatttttttactttacttattagcaataatctacatagttattgatttcacctaaagaaaaagtttacttttgtggacagccaattcacaggatccaaagtgagctaaggaattatacagtgcgccatgagagtgccagcactttaaccactttattcgatgagcttctccttgcccatggtggcatcccagtgaaccaacctaagtttgaaaccgatggttttgaggtggtggatacacctttaactacagatagtgatgacaagaggctcgatagtaccacaactcaagtggatgagagatgctcggaatgtgactgtggtggtgatatcgtcgatgtggcagttcccagtattgtgaaaccacttgaggaaggcatggaccaaccgagttttgagaggaagctgaacgacggttttgaatttgatgattgtgaagctgtcattgtggacaagctggtgggaggacattctgatctagagaagattgttgatgttaatggtcctagcgacagtgaaacaatgcagtcagcatgcagatcctccattgataggttaagcttgaaagggtctccagtagtaagcggattgtctcaaagacagctctcttcagacagtccattagataagttgtctccgtctgcacggagcttgtctgcaaagcgcttatcatctgttagcccgcttgacaaaaagtctccatttggtagcagctcgtcgaagaggctctcatccagttgcccttcttctaagaaatctttctccagtaaagccttgtcatccaagcggatgtcatctggtaatgcttctgctggagtcggtgatcttaacgaagtgattgcagatatggaatttgactgccctgcatcaggtaactcaacatgtccaaagcttttactttgacattgtccctaagattacttattttctgattgagagcaccttgcagatgatcagctggaactgaaagaacatggggattctgaggtgtgtttaagggttttatttacactctggagttctgcagaaatgatatgatggatttaaatatagcttaattttaacagtagtgtgctcatgttcctagtaaaataaaattgtcgccttgtcgaagtaagaaactcattacactagtaaggcacacacatgtatttgttagtttgcacaatagtactagtattatctaccgagcttccaaaactctttgatgcatctgttgctattacagccctgtacgcttgaaataatgtagtcccaaaccattttcctgaccactctaacaaagtagattacatatgtgatgaaagatctatgttacaagaacagttacttaaagatcttacacgttctttgcagatcaactagcttctggagagggacttactacagcggtacaactgcaatgggtgctaatataaatttagatgtaagatttgctcgtctgcgtatgttcggtagtttgaatttctgacttgatcacattgctagtttgcctttggtgtggactcgagcagacatgtgtttgctcacgcgtggtgttttattctcaccagtccaagaacatggttttcagcaaagatcatcgtgctcggatgatctttgtgttcttgacagttgacaggttctgtgtgcttgcttagcatgacaaatgagggttatggtattcttgtttgatttggcaataacttgtaccttcggtatttgaggtcaatgtaatatggatttctttatgattgccagtgaacactgtgaactgttgatgcccgtgcaaattttct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0288900, RefSeq:Os03g0288900