Os03g0289100

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0289100| Description = OSK3 (OSK5)| Version = NM_001056325.1 GI:115452378 GeneID:4332495| Length = 5593 bp| Definition = Oryza sativa Japo...")
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Gene Name

Os03g0289100

Description

OSK3 (OSK5)

Version

NM_001056325.1 GI:115452378 GeneID:4332495

Length

5593 bp

Definition

Oryza sativa Japonica Group Os03g0289100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10057095..10062687

Sequence Coding Region

10058750..10058933,10059218..10059402,10059841..10060023,10060121..10060252,10060383..10060568
,10060938..10061027,10061097..10061180,10061261..10061401,10061476..10061703
,10062068..10062181

Expression

GEO Profiles:Os03g0289100

Genome Context

<gbrowseImage1> name=NC_008396:10057095..10062687 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10057095..10062687 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggaaatgctaaaggcggtgggcattctgaggcactgaagaactacaatcttggaagaactttaggtattggctcatttggaaaagtgaagattgcagagcataagcttacaggacacagagttgctataaagatcctgaaccgccgccaaatgagaaatatggaaatggaggagaaagcaaagagagaaatcaagatactgagattgttcattcatccccatatcattcgcctttatgaggttatatacactcctacggatatatatgttgtgatggagtactgcaagtttggagaactgtttgattacattgttgagaaaggcaggttgcaggaagatgaggctcgccgaatcttccagcagattatatctggggttgaatactgccacagaaacatggtggttcatcgtgatctgaagccagaaaacttgctactggattcaaagtataatgtaaagcttgctgactttggtttgagtaacgtcatgcatgatggccattttttgaagacaagctgtgggagtccaaactatgctgctccagaggtgatctctggtaaattatatgctggacctgaggttgatgtatggagctgtggagtgatcctttatgctctcctttgtggtactcttccatttgatgatgagaatatccccaacctattcaaaaagataaagggtggtatatatactctcccaagtcatttatctgctctggccagagatttgatcccaaggatgcttgttgttgatccaatgaagagaatcacaattcgtgaaattcgagagcatcagtggtttcagattcgccttcctcgttacttagcagtgcctccaccagacacagcacagcaagccaaaatgattgatgaagatacccttcaagatgtcgtaaacttgggttatggaaaggaccatgtgtgtgaatctctgcgcaatagactgcagaatgaggcaactgttgcatattatttactcttggacaatcgattccgagctaccagtggctatttgggagcagactatcaagaatctttggagaggaattttaatcgctttgcttcatcggaatcagcaagttcaaatacaaggcattatcttccaggaagcagtgatcctcatgccagtggtttgcgcccacattatcctgttgaaagaaaatgggctcttggacttcagtcacgagctcaacctcgcgagataatgattgaggtcctaaaggcacttcaagacttaaatgtctcctggaagaagaatggacagtacaacatgaaatgcagatggagcgttgggactcaggccactgatatgttagatgttaacaacagctttgttgatgactcaatcataatggataacggtgatgtaaatgggaggctacctgctgtgatcaagtttgaaatccagctttacaagaccagagacgagaagtatctgctggatatgcagagagttacggggcctcagctccttttcctggacttctgtgcagacttccttaccaagctgagggttctatag</cdnaseq>

Protein Sequence

<aaseq>MDGNAKGGGHSEALKNYNLGRTLGIGSFGKVKIAEHKLTGHRVA IKILNRRQMRNMEMEEKAKREIKILRLFIHPHIIRLYEVIYTPTDIYVVMEYCKFGEL FDYIVEKGRLQEDEARRIFQQIISGVEYCHRNMVVHRDLKPENLLLDSKYNVKLADFG LSNVMHDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDE NIPNLFKKIKGGIYTLPSHLSALARDLIPRMLVVDPMKRITIREIREHQWFQIRLPRY LAVPPPDTAQQAKMIDEDTLQDVVNLGYGKDHVCESLRNRLQNEATVAYYLLLDNRFR ATSGYLGADYQESLERNFNRFASSESASSNTRHYLPGSSDPHASGLRPHYPVERKWAL GLQSRAQPREIMIEVLKALQDLNVSWKKNGQYNMKCRWSVGTQATDMLDVNNSFVDDS IIMDNGDVNGRLPAVIKFEIQLYKTRDEKYLLDMQRVTGPQLLFLDFCADFLTKLRVL </aaseq>

Gene Sequence

<dnaseqindica>1656..1839#2124..2308#2747..2929#3027..3158#3289..3474#3844..3933#4003..4086#4167..4307#4382..4609#4974..5087#ccgtctcttcccgtccccgctccagtgggcgggctctctccctcttcctcctccgctccgctccacctcggttgaccaccacccgatcggcggcgagggcggggagctccggcgtgctcaggtaatccatccatccatccatccacgctgctgctcggctcttgtaggtttttgattcccctcgtttgggtacgctcttgctgtggttcctgctgtttgttgtgtagtcgcctctctggctgatacgctgggtttgggggattcggtcgggagctgagggtggttttgagctcagatttgggacgggtggcgcggtcggctcgttttgggaggagggcgccccgggggtgatttcatgggcttggtcgaggtgggggatggggaattgagtggtgttttgtgctgattgggcgtgtggcggtgtggggatttggtagaggcgacgcctaaacactaggggagttgtcggctcccctttctcatgtttctcttagatctacgaatagagtttctcttctccataggagttgtgattggtcgctcaatcgttattttttttggtttgtcagttggtcgatcccactttcctcaagtttgatttctcgttaggaagatctttccgctcgagagattctgattccttttcgattccatcccgtccttgtatggacgggccgcagtatcggattagcaaatccatgtgaataacataagctagattaacttgtatggtatttccgtatttatatcccgatcctaccattcaccgaaagattttttttaaaaaaaaacttgtgtggtaaaaatatttgcctgtgttgtgctaattatgcgttagtttgatgaatgaatttttaccttgtatcttcatgcttactacatgtgtgcagtcatggtatcgagggaacctttttaaggctaacacactaggatttcatgatttgtctatctctttccaccaccaaggcaccaagctgatatcctggttgcagcagcaccatgggtggagaagatgaggttcacggagtgtaaaggtcatctagtgatgggggttctgatggcagggggatgacttggggcattttgggggtgaaggaaggctaggcacaaaccctcttgacaggacagcggtgggttatagatcatgtttaggtttgttctggtaggattcgatggtgccaatgcaggatggtatttatcgcacctggacaataaggttttggcaaacctttatagttagatttttggttctagaaagggaataagttaaacgttctgaggagcattgatgattcggaccacttgtgccgttaactctgcttctactgcactccagctcctagcgcataaagcttgtgtttccctaaatgtaaccaaccagttagagatgaagggttgttactatgaattgatatacatagctcatctttgaggtgaacatgttaactcgaacaattacatattgcatggtttctgtgacacaccgtatacatcatcctagtattatgaacaagctgtttagcacagcttggatcttgcgtcatgttttgcgttggttcaaaggtgtgcatcatgtcataaatatgccatccaaagtgtaaaattgtttgtggaatgctagacctcagttattttctttcatattaccagtgaaaatggatggaaatgctaaaggcggtgggcattctgaggcactgaagaactacaatcttggaagaactttaggtattggctcatttggaaaagtgaagattgcagagcataagcttacaggacacagagttgctataaagatcctgaaccgccgccaaatgagaaatatggaaatggaggagaaaggtaacctccttttctaaagagaccattttaatcaatctattatcttctgtgctcatatgatcttaagttacttgcttcctgtagtggtctgatctgtgaactgtttccaaaattttgagctaatctaatagttgagataacatatatattgattctagtatacattttgtttgttaagtcaccttcttcgaatgcttttgagctggaaattctagaatctggaatttcatgcatgccaaatgctaaggccaccttcaattttttttattgttttttgtttacagcaaagagagaaatcaagatactgagattgttcattcatccccatatcattcgcctttatgaggttatatacactcctacggatatatatgttgtgatggagtactgcaagtttggagaactgtttgattacattgttgagaaaggcaggttgcaggaagatgaggctcgccgaatcttccagcaggtacttgaccttactcatttctttcacttgttaaacacgctcttttagcatttacttccaactttaatgcttgcttattttcaccattcaaaacctatggagcataagcatgctattcatattcgccgtgcggtgattttgtgtgtggtgttaataattaattgactcaggtttgcatgtaatcggcctgcttttagcttctaacctaatcattgagttttaaatttgtgggataaagtgatgtactaaatcaaactgttgactaattcctaagtcttcactgtgttggtgtcatcattggcatgtgattttaacctacaatggagagagggacatacattattttatgggagaacttgagtttttcattgttctgatttgttgaatatgtatacattatctctcttaatatttataaggtaaaattttatggaacagattatatctggggttgaatactgccacagaaacatggtggttcatcgtgatctgaagccagaaaacttgctactggattcaaagtataatgtaaagcttgctgactttggtttgagtaacgtcatgcatgatggccattttttgaagacaagctgtgggagtccaaactatgctgctccagaggtttttttttttttttttgtatcactgtgggactatatcttcttgctcctttgcatgcaatattttttcttattatagtattatggttcctttgcaggtgatctctggtaaattatatgctggacctgaggttgatgtatggagctgtggagtgatcctttatgctctcctttgtggtactcttccatttgatgatgagaatatccccaacctattcaaaaagataaaggtgagatagatttatgtaggctagccagaccttgtaaactcttatgttgactagatggtccttaaaatatctaagtttttattattattctgtatatttgagtatttgacctgtttgtttggtgttccagggtggtatatatactctcccaagtcatttatctgctctggccagagatttgatcccaaggatgcttgttgttgatccaatgaagagaatcacaattcgtgaaattcgagagcatcagtggtttcagattcgccttcctcgttacttagcagtgcctccaccagacacagcacagcaagccaaaatggtacttcctttgtgtcacattcttaacgagttgttcatttatgtatcaaattttatctactaatgtaattttcttgagatatacttatagagtataataaataatgttttgtcaacataacaccatataaagcagtggtgaaaggcatcttgaatattgtaaaaagtcaaacattatataatatgaggtgtatggagtattttcttgctactggtagtttatcttagcagaaatccctcggatgtaaatgaagcagacaaattttcacttgcaatatcacttatttacatgttcgattttttatagttatctttccgtttagctctcgtggcaatggtataatgttttgatatatggccttttttgaagattgatgaagatacccttcaagatgtcgtaaacttgggttatggaaaggaccatgtgtgtgaatctctgcgcaatagactgcagaatgaggtatatgcaaacaaatgaactgttcatcctttttaatgatcacattgctgattttagaccattttctaggcaactgttgcatattatttactcttggacaatcgattccgagctaccagtggctatttgggagcagactatcaagaatctttggttagttcaaatttacagcatctttgtctgacataatttgcaaagtgtttaattaactgtctgacatgatggttcattaggagaggaattttaatcgctttgcttcatcggaatcagcaagttcaaatacaaggcattatcttccaggaagcagtgatcctcatgccagtggtttgcgcccacattatcctgttgaaagaaaatgggctcttggacttcaggttttgcatgatgttcctttttacttcttttgtaacacaccgaaatttgtactgacatatcaattatccaacagtcacgagctcaacctcgcgagataatgattgaggtcctaaaggcacttcaagacttaaatgtctcctggaagaagaatggacagtacaacatgaaatgcagatggagcgttgggactcaggccactgatatgttagatgttaacaacagctttgttgatgactcaatcataatggataacggtgatgtaaatgggaggctacctgctgtgatcaagtttgaaatccaggtgtgcaatttcaaattctagcaggactgacttaaaaagtttgatacagtattttttccctagatattcaacttcatagttaaatccttggtttaaagatcccattggaatgactaaagaatgcatccccttttaggttcaatcatgagttgatgcattgttgtcaatatgtattttctgttcatgccattttgaaccagcaatttttttactttcaatactaaaaagtactagtcagccatatatattatacttttagcctagtatagtatcattcgaatgttgtagctgttgtatttggtatgtattatatatatgttgtatatctggctgtagaattgctgattccgtttcttttcttcagctttacaagaccagagacgagaagtatctgctggatatgcagagagttacggggcctcagctccttttcctggacttctgtgcagacttccttaccaagctgagggttctatagtacccttgtgttggcttcagtgaaaaaccaaacctagggttttatcatgtgcggtttttcactgcaataatgaataaaggacaccatgtaaataggcagctgtgactttcttcccagtccttagacagcgaaggttgttgtttgagtgactagtgttgtgttaagcaccaaaatgttggttgttacagacttacatagtatatagatctttataagctatctgggtgggcgaatgcttgatttctaatttttgcaggctgcagctatactgctggtgatgccgcagtacaagcttttctttttgctcctgcacacggttattatacgtgtgcatggaaattttgctactgctaggaagaagctagtaagaatatcagccccttgctgccgggttgtggtataaatgtagatgacagcaaatttagtggaatatttctatgacaacaaatgtagtcgtatgatcatgctcatgcccccctatggagaatcgagatatcctttctctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0289100, RefSeq:Os03g0289100