Os03g0289300

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0289300| Description = Similar to Phospholipase C (Fragment)| Version = NM_001056327.2 GI:297600758 GeneID:4332497| Length = 3371 bp| Defi...")
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Gene Name

Os03g0289300

Description

Similar to Phospholipase C (Fragment)

Version

NM_001056327.2 GI:297600758 GeneID:4332497

Length

3371 bp

Definition

Oryza sativa Japonica Group Os03g0289300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10074884..10078254

Sequence Coding Region

10074884..10075201,10076067..10076263,10076363..10076498,10076576..10076827,10076913..10077145
,10077252..10077369,10077441..10077593,10077683..10077769,10077964..10078254

Expression

GEO Profiles:Os03g0289300

Genome Context

<gbrowseImage1> name=NC_008396:10074884..10078254 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10074884..10078254 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacgtacaagtgctgcatcttcttcacccgcaggttcgcgctgagcgacgcgtccacgccgggcgacgtgcgcatgctgttcacccgccacgccggcggcgcgccctacatgggcatcgacgagctccggcgctacctcgccgccagcggggaggcccacgtcgacgccgacacggcggagcggatcatcgaccgggtcctgcaggagcgcagccgcaccccgcgcttcgggaagccgtcgctcaccatcgacgatttccagtacttcctcttctccgaggacctcaacccgcccatctgccattccaaggaagtccatcacgacatgaatgcaccattatcgcactacttcatatacactggacacaactcgtatctgacgggcaatcaacttagcagtgactgcagtgatattcccatcattaaggcactgcaaataggcgtccgtgtaattgaactggacatgtggccaaattcttctaaagatgatgttgatattctccatggaaggacactgactgccccagtatcacttatcaaatgcttgaaatccatcaaagaatatgcctttgttgcgtctccctaccctgttattataacattagaagaccaccttacatctgatcttcaggcgaaagtagctaagatggttcttgaagtatttggagataccctatattatcccgagtcaaaacatcttcaagaatttccttcacccgaagcactgaggggacgtgtcatcctctcaacaaaacccccaaaggagtaccttgaatcaaaaggtggtactatgaaagacagagacattgagcctcagtttagcaaaggacaaaatgaagaagctgtctggggaacagaagtcccagatattcaggatgagatgcaaaccgccgacaagcagcatgagaatgatatactatacacccaaagagatgtggaagaagatgatgagaagaaaatgtgccagcatcacccactagagtataaacaccttattactattaaggcaggaaagccaaagggtgctgtagttgatgccttaaagggtgatccagataaagttagacgcctcagtttgagtgagcaggaacttgcaaaagtggcagcgcatcatggtcgtaacatcgtgagctttacacataaaaatcttctgagaatatacccaaagggcactcgcttcaattcttcgaactataatccgtttcttggttgggtgcatggtgcacaaatggtggcatttaatatgcaggggtatggaagatctctttggctaatgcacggattctacaaggccaacggtggctgcggttatgtgaagaagccagatttcatgatgcaaacttgtccagatggaaatgtttttgacccgaaagcagatttacctgtgaagaaaacactcaaggtcaaagtatacatgggcgaaggttggcagagcgacttcaagcagacatacttcgacacgtattcccctccagacttctacgcaaaggtgggcattgccggggttccgtcggactcggtgatgcagaagacgaaagccgtggaggacagctgggttcccgtgtgggaggaggagttcgtgttcccgctgaccgtcccggagatcgcgctgctccgcgtggaggtgcacgagtacgacgtgagcgaggacgacttcggcgggcagacggcgctcccggtgtcggagctgcggccggggatccgcaccgtgccgctcttcgaccacaaggggctcaagttcaagagcgtcaagctcctcatgcggttcgagttcgtctag</cdnaseq>

Protein Sequence

<aaseq>MGTYKCCIFFTRRFALSDASTPGDVRMLFTRHAGGAPYMGIDEL RRYLAASGEAHVDADTAERIIDRVLQERSRTPRFGKPSLTIDDFQYFLFSEDLNPPIC HSKEVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDIPIIKALQIGVRVIELDMWPN SSKDDVDILHGRTLTAPVSLIKCLKSIKEYAFVASPYPVIITLEDHLTSDLQAKVAKM VLEVFGDTLYYPESKHLQEFPSPEALRGRVILSTKPPKEYLESKGGTMKDRDIEPQFS KGQNEEAVWGTEVPDIQDEMQTADKQHENDILYTQRDVEEDDEKKMCQHHPLEYKHLI TIKAGKPKGAVVDALKGDPDKVRRLSLSEQELAKVAAHHGRNIVSFTHKNLLRIYPKG TRFNSSNYNPFLGWVHGAQMVAFNMQGYGRSLWLMHGFYKANGGCGYVKKPDFMMQTC PDGNVFDPKADLPVKKTLKVKVYMGEGWQSDFKQTYFDTYSPPDFYAKVGIAGVPSDS VMQKTKAVEDSWVPVWEEEFVFPLTVPEIALLRVEVHEYDVSEDDFGGQTALPVSELR PGIRTVPLFDHKGLKFKSVKLLMRFEFV</aaseq>

Gene Sequence

<dnaseqindica>1..318#1184..1380#1480..1615#1693..1944#2030..2262#2369..2486#2558..2710#2800..2886#3081..3371#atggggacgtacaagtgctgcatcttcttcacccgcaggttcgcgctgagcgacgcgtccacgccgggcgacgtgcgcatgctgttcacccgccacgccggcggcgcgccctacatgggcatcgacgagctccggcgctacctcgccgccagcggggaggcccacgtcgacgccgacacggcggagcggatcatcgaccgggtcctgcaggagcgcagccgcaccccgcgcttcgggaagccgtcgctcaccatcgacgatttccagtacttcctcttctccgaggacctcaacccgcccatctgccattccaaggaagtaagcaaactacccgctcgatccccaatttcccaaatgctgttagattcatcgtcattccgtgataatcctgccgttgcacaatgcggtgaaatggcgtaatttgctaggattcagaaggggattcttggggtttgtttagttcacattaaaattaaaagtttggttaaaattggaatgatgtgacgaaaagttagaagtttgtgtgtgcaggaaagttttgatgcgatggaaaagttggaagtttgaagaaaaaaattaaaactaaacatggctttggtcggaactgctctgtagtgtggacgtcattcaaatctttatgaagtatttttttaaagatggatcacacatgtgattaacatagttatataaaattttgttaaaatttgaaaatgtagaatacgatgatataaatcactatataaacatgcaagtttaaatttgatccacgcaaagagaaaaaatataaccgattatgtttgagttgtggcattactattttctatctggttctattaattttttttctccaattgtagatcgaatcaagcctttgtatgtttgtacatagacttatgctatcgtaatctactcccattttttttggacggagggagtatgttatcaattttagtttaattttttttacaactatttgggtcacatacaaataactggcacatatgcacctaggtgtaaagaagtcaacatgcaggtaatgaattgaatttccatacaacattctgctctcctaagaaattacgcttacaagttcacttggatattgctaaactccattttgatattacttagtgtgtactgaatgatctaagatgtgagttgatggtagatctcgtgctctcaggtccatcacgacatgaatgcaccattatcgcactacttcatatacactggacacaactcgtatctgacgggcaatcaacttagcagtgactgcagtgatattcccatcattaaggcactgcaaataggcgtccgtgtaattgaactggacatgtggccaaattcttctaaagatgatgttgatattctccatggaaggtatgcatgagaattgctcacttgaagacatttttgttctgcactggaggccattcgatatgctatgaccttattccaaactatttgcttctttggtaggacactgactgccccagtatcacttatcaaatgcttgaaatccatcaaagaatatgcctttgttgcgtctccctaccctgttattataacattagaagaccaccttacatctgatcttcaggcgaaagtagctaaggtaattgcattttcctcgtatgatcaataatttggtgcagttgattctgttgtagctagttatgaaattttctttagatggttcttgaagtatttggagataccctatattatcccgagtcaaaacatcttcaagaatttccttcacccgaagcactgaggggacgtgtcatcctctcaacaaaacccccaaaggagtaccttgaatcaaaaggtggtactatgaaagacagagacattgagcctcagtttagcaaaggacaaaatgaagaagctgtctggggaacagaagtcccagatattcaggatgagatgcaaaccgccgacaaggttctactggttttaacatttgttgtttcttgtttcttagcatatggtgtatgtccatcactgttgtattggctttattccctagcagcatgagaatgatatactatacacccaaagagatgtggaagaagatgatgagaagaaaatgtgccagcatcacccactagagtataaacaccttattactattaaggcaggaaagccaaagggtgctgtagttgatgccttaaagggtgatccagataaagttagacgcctcagtttgagtgagcaggaacttgcaaaagtggcagcgcatcatggtcgtaacatcgtgaggttcgtttagcaaatatactgaatttcgtagcaaagtattttctatcattgcaccagagctctctatgtccattgaccttaacttcattctgtttattcaaagcagctttacacataaaaatcttctgagaatatacccaaagggcactcgcttcaattcttcgaactataatccgtttcttggttgggtgcatggtgcacaaatggtggcatttaatatgcaggtacatttctaacatgacactcctctgctacatcatattggcctgaatgcctgatacatttttcttcgcaggggtatggaagatctctttggctaatgcacggattctacaaggccaacggtggctgcggttatgtgaagaagccagatttcatgatgcaaacttgtccagatggaaatgtttttgacccgaaagcagatttacctgtgaagaaaacactcaaggtaggtttgtggcatatgtttcttcctttcattttcatctctgaaattcaggaatcgagctacttacagcttgcctgtttgtctaccaggtcaaagtatacatgggcgaaggttggcagagcgacttcaagcagacatacttcgacacgtattcccctccagacttctacgcaaaggtacatcgaattttacgctgatgccaaacgccaacaaatttgcaaatgcaaaacggagctttgaaaaaacatgtatatatgtataacttttacatatggagtgagatgaagacaaactttatatcaaaattgtagagctccatgagttctacgacgttcttattgactagtccatcgttccatcatcataacaggtgggcattgccggggttccgtcggactcggtgatgcagaagacgaaagccgtggaggacagctgggttcccgtgtgggaggaggagttcgtgttcccgctgaccgtcccggagatcgcgctgctccgcgtggaggtgcacgagtacgacgtgagcgaggacgacttcggcgggcagacggcgctcccggtgtcggagctgcggccggggatccgcaccgtgccgctcttcgaccacaaggggctcaagttcaagagcgtcaagctcctcatgcggttcgagttcgtctag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0289300, RefSeq:Os03g0289300