Os03g0289800

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0289800| Description = Similar to Leucoanthocyanidin dioxygenase-like protein| Version = NM_001056329.1 GI:115452386 GeneID:4332499| Length...")
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Gene Name

Os03g0289800

Description

Similar to Leucoanthocyanidin dioxygenase-like protein

Version

NM_001056329.1 GI:115452386 GeneID:4332499

Length

5289 bp

Definition

Oryza sativa Japonica Group Os03g0289800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10089531..10094819

Sequence Coding Region

10090137..10090460,10093871..10094710

Expression

GEO Profiles:Os03g0289800

Genome Context

<gbrowseImage1> name=NC_008396:10089531..10094819 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10089531..10094819 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcagctgcttcaacggcggcgccggctggccggagccggtggtgcgcgtgcaggccgtgtcggactcgtgcggcgcgacgatccccgagcggtacgtcaaggcgccgtccgagcggccgtcgtcgctggacggcggcggcggcctgaacaatatcccggtggtggacatgtcaatgccggacggggaggagaccgcccgcgccgtggcggcggcttgccgggagtggggtttcttccaggcggtgaaccacggcgtgcgccccgagctgctgcgccgggcgcgcgcggcgtggcgcgggttcttcgcgcggcccgcggaggcccgcgaggcgtacgccaactcgccggcgacgtacgaggggtacggcagccgcctcggcacggccaagggcgggcccctcgactggggcgactactacttcctccacctcctcccggcggcgctcaagagccacgacaagtggccgacgtcgtccgtccccgcgggcggcggcggcctgcgggaggcgacggaggagtacgcggaggaggtggtgcggctgtgcaggagggtgatgaggctactgtcgagggggctcgggctggacgacgggaggctgcaggcggcgttcggcggggtcggcggcgagggcgcgtgcttgagggtcaacttctacccgcgctgcccgcagccggagctgacgctcggcgtcgcgtcccactccgaccccggcggcatgaccatgctgctcgtcgacgaccacgtcaggggcctccaggtgaagaacgccggccactggatcaccgtcgaccctgttcccgacgccttcatcgtcaacatcggcgaccagatacaggtgctgagcaacgcggtgtacaagagcgtggagcaccgggtgacggtgagcgcggcggaggagcggctgtcgctggccttcttctacaacccgcggagcgacctgccgctggcgcccatgccggagctggtggcgccgccggcccgcccggcgctctacccgccgatgaccttcgacgagtaccgcgagcacatccggcggtgcggcctcagcggcaaggcgcagctccagtctcagcagatggcaaccgccatctgcggcgcccctcccgccgctactgcgttttcttcttcttcctcctcagcgagcagtctagctcgctag</cdnaseq>

Protein Sequence

<aaseq>MSSCFNGGAGWPEPVVRVQAVSDSCGATIPERYVKAPSERPSSL DGGGGLNNIPVVDMSMPDGEETARAVAAACREWGFFQAVNHGVRPELLRRARAAWRGF FARPAEAREAYANSPATYEGYGSRLGTAKGGPLDWGDYYFLHLLPAALKSHDKWPTSS VPAGGGGLREATEEYAEEVVRLCRRVMRLLSRGLGLDDGRLQAAFGGVGGEGACLRVN FYPRCPQPELTLGVASHSDPGGMTMLLVDDHVRGLQVKNAGHWITVDPVPDAFIVNIG DQIQVLSNAVYKSVEHRVTVSAAEERLSLAFFYNPRSDLPLAPMPELVAPPARPALYP PMTFDEYREHIRRCGLSGKAQLQSQQMATAICGAPPAATAFSSSSSSASSLAR</aaseq>

Gene Sequence

<dnaseqindica>4360..4683#110..949#atcacggtgcacatatagcacagcaaaacgtgtgcgtgtgcgtgtgcatgtgcgagtgcatgacgtgctagctactagctaagtactagctagccagtcagctccgacgatgagcagctgcttcaacggcggcgccggctggccggagccggtggtgcgcgtgcaggccgtgtcggactcgtgcggcgcgacgatccccgagcggtacgtcaaggcgccgtccgagcggccgtcgtcgctggacggcggcggcggcctgaacaatatcccggtggtggacatgtcaatgccggacggggaggagaccgcccgcgccgtggcggcggcttgccgggagtggggtttcttccaggcggtgaaccacggcgtgcgccccgagctgctgcgccgggcgcgcgcggcgtggcgcgggttcttcgcgcggcccgcggaggcccgcgaggcgtacgccaactcgccggcgacgtacgaggggtacggcagccgcctcggcacggccaagggcgggcccctcgactggggcgactactacttcctccacctcctcccggcggcgctcaagagccacgacaagtggccgacgtcgtccgtccccgcgggcggcggcggcctgcgggaggcgacggaggagtacgcggaggaggtggtgcggctgtgcaggagggtgatgaggctactgtcgagggggctcgggctggacgacgggaggctgcaggcggcgttcggcggggtcggcggcgagggcgcgtgcttgagggtcaacttctacccgcgctgcccgcagccggagctgacgctcggcgtcgcgtcccactccgaccccggcggcatgaccatgctgctcgtcgacgaccacgtcaggggcctccaggtgaagaacgccggccactggatcaccgtcgaccctgttcccgacgccttcatcgtcaacatcggcgaccagatacaggtatatatataaagcttaattactatactccctcggtactctctctccatctaaaaatataatataagtgattttggaggatgtgacacataaactgtttagattcgtagtatcagtatgtgtcacattccactaaaatcatttatatttttggacggataaaatatttcacgttggtttcatttttgaacaaacaaattaaaaagaactggaggtatatatttatacatatatttcagtttcaccgtgtatatataaccgccgcaatttgtatatgcatcaaaagagaacagccggagaacgtaaggtgcagccgtggttgcaccataccgtataagtgcaaactgcaaagcagtgatgaagcatggacgatagaagaaagaaaggcagagaaagaaagaatgaaaaggaaaaaaagagagcaagagaaactgttctcagatgtcgacacgtgtctctggctcttcgttgtgtgcggtggtacaagagaccgtcgccacaacttaaacaaaggagtcgtcggcaaatcctatcgtttggtacggtccaggacaaattgaagacgagaaataattaaaccatgtttttaacatgtgtcgtttatttttaggattttatttgcacatccaagatctcttacaaaaacggtatgaaagctaattaacagtacaaaaaaaatagtcatattatttttttaaaaaaaatattattacacatatatttcatgatgaataagttaactcattttagccttgaatatttcaaaagttgggttctaagggcacgttctacctggatgattgtatatattttaatttagacagaagaaaattactcaaagaaatgtatttatgaattaaatatcataaagctaacaagtagtttagaaaatgctatctaatcaatgctgattgtatgtagcaagctttggagacatttatttttggaaacatggcacaaataatccatacctatattactagctgtttagaatttacactaagcatatatattctgtgtactcagtaaatagcatgagtgccacttgtggtgtgtattcttaaaaactacattacatattgattacatatatatgttaaggacagagggaaaacttataaatcgactagctaattattactgaagtcttgcaaaatgttatgagaaagaagttgcatgttgtttttgttttcctttttgaggtttcttccctctagctagtgtaaggctttttggaaactaatttctccgaaactttcaaggatattccatcgcacaataattaccaactaattaaggttgcttagctaagagtgatttcgataagcaaaatgctttccattagctaagtgagccatttaatttgtagtggacatcgaggaaacatgcattttttttaaaaggaacacagcagcggaggcctgctgttaaatggaggaaacatgcatgttgtgcatatgggatgggatcgatgagacagtaagaagccagggcagattaagccatagcatgaaattacctacaattaatcagcatttctgaacactagtatatactccatccttttttaatatatgacatcattgattttttgagatatgtttgaccattcgttttattaaaaaaatataattattatttattttattatgacttgatttatcatcgaatgttctttaagcatcatttaattttttttatatttgtgtaaaaaatttgaataatacaaacgatcaaacgtttgtcaaaaagtcaactacgttatatattaaaaaaatggagggaatatatctggtacggaaaagacgatatcattgttttaaatagtttactaatatttttttaaagtacgcatacagtgttcatctgatatccatgcgataatcacagtaaaatttgattagcgtaattattttctaataaggaaataattaatatatctagctagactagtctagatacacagcacatttattatatttccatattaattattatagatgtattatgggtataggcatcagctagcttagtgaaaaaaatacggttgaatcatatcacatgtttccatccattcatataatttttcgacaagaaatgaaccccacgtgcagtactatgtgcctttctggaataaattaagaggatatatgatgcatgttagaaaagtctagctaggtgccggtcgctccatctcaaattaattaaggatttctttttcccattcctaatcttagccagctagtgttaatttgaccgtagcttgtgttcactgtctagagacgtattctctcggtctatctctaatagaacttgcacttgatgtgtaagtgctattactgctgaagttactgatcattatcaagtaggcaccttaggtgttgcggccaatcattcacaaaagtgacatatatatatgccgcaaactttccgtcaatgttgggtctgtccatagcctcaattaattatatatatttagaaatacaatatatatattctctttcttagctaacaattatattttctcattaacagttctgtatatatatacctatgtcactcaacgtgctccacctaagctgggccatctatggcattaaacaacatttcacgtacgtgtgacaaatctgaggtggcactagaactaagaaggaaagagacacgggatagatcttttatgagatctggctttgacacgaaatccaaccacgaaaactgtacccctaaataagcattagggcatatgtgtaattctaatttttaattgattgaaatggtaattttgttagaaataatatgaaatctactagataagttactaattaattaattaactatcttaggctgagtttgaaacaccggtttgtatgaaatttttggcatcccaggaaacgctgtaactcattaacgcatgattaatcaagtatttattactataaatttttaaaagtatatttatttgtttttctaaaagaaactttcatatgaaagcttttgcacgaaaaatattatttagcagtttaaaaatgtgctagtagagaatgaggaagtaattgtttagagaactctgccttacattagatgacatagataaaatactctagtttacagacttagtttatgtataggagtagctcatgatttaatgattaccatttttttggtgtaacagttaatgcaagaatctatatgtattttcgtggccagcagagagagacaaagcacaatcagcgcagaacggtctattattaattattggctcaatttaagcatatgtgcatagtacccttgatgctgcagcagtatgcattttgtcgagctgcacatgcagttaattcactgttacaataattgactactacagggaatatgcacatgttgattaattagcgaataatgcgcggatgcaggtgctgagcaacgcggtgtacaagagcgtggagcaccgggtgacggtgagcgcggcggaggagcggctgtcgctggccttcttctacaacccgcggagcgacctgccgctggcgcccatgccggagctggtggcgccgccggcccgcccggcgctctacccgccgatgaccttcgacgagtaccgcgagcacatccggcggtgcggcctcagcggcaaggcgcagctccagtctcagcagatggcaaccgccatctgcggcgcccctcccgccgctactgcgttttcttcttcttcctcctcagcgagcagtctagctcgctagctagctattccctttgtgccaaaaaaatagcctatataagaatggaatataacttaggacaatgaatatgaacatatttatttcgagattcgttgttataggttatgtcctatcctatttaggttagctttttggtacaaagggagtagttggcttcaacttgcaagctccgatatccatccagaaggaacatgtttttgtggatagcgtgcgttggcgacctgtagatattattactctctccatctcaaaatataacaacttgtcctcaggatttgtcccaaaatataataacttctccaccaacattttcttcccaaccaatcataaccctccaccattcacttttcccacctacctccactactcatctaatcacaaccctccaccatccacttctacctactttcttaataaccgtgtcgaactctaaaacttcttgtattttgggatggagggagtaataaataattgatgtttattctactttgtgaagatcatggtgcagagtgagacgacgtggtgtatagtacataaactcgtctcacgcgcctaaattgtcaccacatgcatgacaaagttactcgcctacgtacatatattatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0289800, RefSeq:Os03g0289800