Os03g0291800

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0291800| Description = Protein of unknown function DUF231, plant domain containing protein| Version = NM_001056335.1 GI:115452398 GeneID:433...")
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Gene Name

Os03g0291800

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001056335.1 GI:115452398 GeneID:4332508

Length

4538 bp

Definition

Oryza sativa Japonica Group Os03g0291800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10199213..10203750

Sequence Coding Region

10199299..10200116,10200809..10200989,10201083..10201282,10201391..10201549,10202932..10203298

Expression

GEO Profiles:Os03g0291800

Genome Context

<gbrowseImage1> name=NC_008396:10199213..10203750 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10199213..10203750 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttttctttaaagcggcggagcgggaggccttcctgggcgctccggagatgcagcagcggcggaagtcggtgttcgcctcggcgccgttcgcgatgaagcaggcggcgctgggggccggcgtggcggcgcgcaggaacggcgcgccgctgtcgctggcggcggtggtgttcgcgctcttcgtgttcgcgacgttcctctacaacgaggacatcaagtccatcgccgacttccccttcggcgccggcgcgctccgcgccaagtcccccgacctccacgtcctccaggagaccgtgggcgccgcgcacctcgccgccggcagcatcgccaagcgcggcgaggaggtcatcgtccgtgtcctcgacgcgcccgcctccacggcgatggcggccgccgccggcagcagcagcaacaacagcacgattgaggtggccaaggccaatgccaacgccaacgccaacgccgccgacgccggtgtcaaggtggacgaggggcaggagagggagcgggacgtgacgctcccgagtgtcaaggaaggcggcgccgacgaggcgaggcggcgggaggacgaggaggccgccgagaaggagtcctcggcgaaggccgccgcggcgacggcggcgctgcggaccgtggtgagcgtgccggacacctgcgacctgtaccgcggcaactgggtgtacgacgaggtgaacgcgccggtgtacaaggagtcgcagtgcgagttcctgacggagcaggtcacctgcatgcgcaacggccgccgcgacgactcctaccagaagtggcgctggcagccgaccgactgcgacctgccccggttcgacgcgaggctgctgctggagcggctgcgcaacaagcggctgatgttcgtgggggattcgctgaaccgcaaccagtgggagtcgatggtgtgcctggtccagtccgtgatccccaagggcaagaagacgctcaccaagttcgtcaacggcggcaacagcaacatcttctacgcacacgagtacaacgcgacggtggagttctactgggcgccgttcctggtggagtcgaactcggacaacccgcaggtgcacagcgtccccgaccgcgtcatccagtggcactccatcgccaagcacgcgcacaactggctcggcgtcgactacctcatcttcaacacctacatctggtggctcaacaccctcgacatgaaagtcctgaaggggtcgttcgaccagggtgcgacggagtacgtggaggtggaccggcccgtggcgtacaaggaggtgctcaagacgtgggcgaagtgggtcgaccgcaacattgaccccaaccggacgaccgtcttcttcatgagcatgtctcccaaccacatcacgccggaggcgtggggaaactacggagggatcaagtgcgcgatggagacgctgccgatcacgaaccggacgacgtcgctggacgtgggcacggactggaggctgtacgccggggcgcaggaggtgctccagacgttccgccgggtgccggtgcacctcgtcgacatcacggcgctgtcggagctccgcaaggatgcgcacacgtcggtgcacacgctccggcaggggaagctgctcacccccgagcagcagtccgaccccaagacgtacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctctacgcccgcatcgcctccgccccatggtcatccgaccagtag</cdnaseq>

Protein Sequence

<aaseq>VFFKAAEREAFLGAPEMQQRRKSVFASAPFAMKQAALGAGVAAR RNGAPLSLAAVVFALFVFATFLYNEDIKSIADFPFGAGALRAKSPDLHVLQETVGAAH LAAGSIAKRGEEVIVRVLDAPASTAMAAAAGSSSNNSTIEVAKANANANANAADAGVK VDEGQERERDVTLPSVKEGGADEARRREDEEAAEKESSAKAAAATAALRTVVSVPDTC DLYRGNWVYDEVNAPVYKESQCEFLTEQVTCMRNGRRDDSYQKWRWQPTDCDLPRFDA RLLLERLRNKRLMFVGDSLNRNQWESMVCLVQSVIPKGKKTLTKFVNGGNSNIFYAHE YNATVEFYWAPFLVESNSDNPQVHSVPDRVIQWHSIAKHAHNWLGVDYLIFNTYIWWL NTLDMKVLKGSFDQGATEYVEVDRPVAYKEVLKTWAKWVDRNIDPNRTTVFFMSMSPN HITPEAWGNYGGIKCAMETLPITNRTTSLDVGTDWRLYAGAQEVLQTFRRVPVHLVDI TALSELRKDAHTSVHTLRQGKLLTPEQQSDPKTYADCIHWCLPGLPDTWNQFLYARIA SAPWSSDQ</aaseq>

Gene Sequence

<dnaseqindica>87..904#1597..1777#1871..2070#2179..2337#3720..4086#gggaagcaaagcaagaagctttttttacttctcgggtttgcaagccaccgggaaaggccggggcttggtggtggtggtggtggtaagttttctttaaagcggcggagcgggaggccttcctgggcgctccggagatgcagcagcggcggaagtcggtgttcgcctcggcgccgttcgcgatgaagcaggcggcgctgggggccggcgtggcggcgcgcaggaacggcgcgccgctgtcgctggcggcggtggtgttcgcgctcttcgtgttcgcgacgttcctctacaacgaggacatcaagtccatcgccgacttccccttcggcgccggcgcgctccgcgccaagtcccccgacctccacgtcctccaggagaccgtgggcgccgcgcacctcgccgccggcagcatcgccaagcgcggcgaggaggtcatcgtccgtgtcctcgacgcgcccgcctccacggcgatggcggccgccgccggcagcagcagcaacaacagcacgattgaggtggccaaggccaatgccaacgccaacgccaacgccgccgacgccggtgtcaaggtggacgaggggcaggagagggagcgggacgtgacgctcccgagtgtcaaggaaggcggcgccgacgaggcgaggcggcgggaggacgaggaggccgccgagaaggagtcctcggcgaaggccgccgcggcgacggcggcgctgcggaccgtggtgagcgtgccggacacctgcgacctgtaccgcggcaactgggtgtacgacgaggtgaacgcgccggtgtacaaggagtcgcagtgcgagttcctgacggagcaggtcacctgcatgcgcaacggccgccgcgacgactcctaccagaagtggcgctggcagccgaccgactgcgacctgccccggtacgccatttcttcccccacaattttttcacgccatttcttgcccaatttcgtgccgtttcacgcaattccgggtaaccggcattgactcacgccggcgatcatcgtcggtttcccaaattgatgccggtttctacccttttctttttcttttttcatcagcatcggtcggtcacctcgaaacgctaagtcagaaataaccgtaggaatacttacgggccaaaattaagacgaacgtgtcagggaaattaaaatagaacgttcgagatttttgaaacggaacagagagtagtagtaccaccatgccacaccagtacaccactctggtagtgagctgtgacgtcggactgtactgtgcagccgcgctaccccctgttggattaagctttgcttaatctaatcactcagcatctggctgctgttgaagcagccactacttaaatcaaacacaggcacgccaaattattctcttttccaaccggggaacagctgcacgcagcgacgcccagtcagtcacacagtgggtgagtgacgcgagtagaatatactactacaacttgctctgtatctgtgtctcggcacagtctgatgatagtggcaaatatagttggcgatccaacaacgctggttgctaaataacgcaggaaaagtctaacgaaagctgatgtggtgtggggaaaaaaaaactgcaggttcgacgcgaggctgctgctggagcggctgcgcaacaagcggctgatgttcgtgggggattcgctgaaccgcaaccagtgggagtcgatggtgtgcctggtccagtccgtgatccccaagggcaagaagacgctcaccaagttcgtcaacggcggcaacagcaacatcttctacgcacacgtacgtagcaggcatcagcaacgtcacgtacgtactccgctgtcgatccgacatgatctccccctgacgatacggtgtatgtgctacgtgcaggagtacaacgcgacggtggagttctactgggcgccgttcctggtggagtcgaactcggacaacccgcaggtgcacagcgtccccgaccgcgtcatccagtggcactccatcgccaagcacgcgcacaactggctcggcgtcgactacctcatcttcaacacctacatctggtggctcaacaccctcgacatgaaagtcctgtaagttgtactcctagcaccccagcagcgtacacacatacatatagtgatatagaagtgggtgtgctgatctgggcgaaaaaatatgtgtgtggttgtacgtgacaggaaggggtcgttcgaccagggtgcgacggagtacgtggaggtggaccggcccgtggcgtacaaggaggtgctcaagacgtgggcgaagtgggtcgaccgcaacattgaccccaaccggacgaccgtcttcttcatgagcatgtctcccaaccacatcacgtaagccgccatttatgcctttgcctgcatctgcattgcattgcccctctccatgatttacttcgctgcacagtgcacacgtgcccacgcgcagtacagttcgctcggagttaatctaccaatcaataggaagatatgctgcacagtgatggtacatagagaactccattccgattaggtgttggggtatgttcagaaaacaaaattaggtgcttgaggtgtacctagcaactgtgttgcgtttgcaaggaggaaacttagctagcagccacacttgctttctggactaatagtaatctacaagtaatttaattaggtggtgagagcctgaggggactcgtgagctttcggagaaacattagtagtagaagcctcttatacattaactagctactagtagcatggtatcggaatacaactgcacatggtatcccatcatagagcactgtactactcatcggtagctgtctctcgtgaaatggcatcgtggggcacggtacctgcgtacaacgcgtcactgtacttcgtcaggacatggtccggacaatctgttctgactggttcaagatttgcatttttcacggtttcaacactggtatctaagcttctttagccaatactataaaaagcttaattaattagtgagatgtcttcaaaacatgctagttgacgtgggtgtagaaacaactgaggtttgttgaaccaagaataattcaaattgagtatgtatttgtgtagagtagtaagctcaaaactagtcatgtggatagctggagagaggcgagctacggtgacaagctgatgttggtggaccatagaaaatcccaggcccacctgtaggcatgcatctcgacatggcccaccctagtcgctaccaaagatgaagcatacgaatccaattccccgagctccatgtcactttccttcctcgagccctaaccccacgaaagagaaacgacatcaagttgaaggtagcaacaaaagacagtagtataatactgatagcaatcaagcctactaatcgtgctccacaatgatgatcagcctttgccattgcatctttgctgttgcaaaatactcaaaacagagagattcttgcagtagtcgacaagcaaaagttaaatcagttttggtccctgcaagaatctcgagctagtatccgcataaattacacggtccgtgcatatgctgtgataatggcgccaatatgcgagtgccatcatcatcagggtatcatcagcacgacagaatctagggtaccacggctccaattcgctggaacattaaccatagtactgcatcagaattctacccatcacggcatcacgtggtgacggacggatggtggtataatcttgtgtcgtgtgcgcgttttgtggcaggccggaggcgtggggaaactacggagggatcaagtgcgcgatggagacgctgccgatcacgaaccggacgacgtcgctggacgtgggcacggactggaggctgtacgccggggcgcaggaggtgctccagacgttccgccgggtgccggtgcacctcgtcgacatcacggcgctgtcggagctccgcaaggatgcgcacacgtcggtgcacacgctccggcaggggaagctgctcacccccgagcagcagtccgaccccaagacgtacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctctacgcccgcatcgcctccgccccatggtcatccgaccagtagaaaaagagccaaataaggctagcttccaagtgttctgcgagacaagaaaaggagccaagaacaccgttgacacaccatcgatgcccgccgcccggccgcggccacctcactttttcttactttgggttacttttttttcttctctttttttcaccatttttctttctttctctggggttgcgtaaagctgtcttgtgctgtgtttaacatgtgattcttttgttaaaaaagaaatggagggtttaggatggtgaaggaggatctgtgggcgggctgtgttgactatagctcatttcttgtcctgctgataaaggatgcatggataggagaaagcaaaaaaagggtgtgatgtgagatgtaaggggggaaagaaaaagggagggttacatgtaaagaatttttgtgtattacaccattctagtacattgatgctcaagagaggtataaaggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0291800, RefSeq:Os03g0291800