Os03g0296000

From RiceWiki
Revision as of 12:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0296000| Description = Myb, DNA-binding domain containing protein| Version = NM_001186451.1 GI:297722032 GeneID:9267500| Length = 2268 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0296000

Description

Myb, DNA-binding domain containing protein

Version

NM_001186451.1 GI:297722032 GeneID:9267500

Length

2268 bp

Definition

Oryza sativa Japonica Group Os03g0296000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10413660..10415927

Sequence Coding Region

10413660..10414317,10415487..10415616,10415795..10415927

Expression

GEO Profiles:Os03g0296000

Genome Context

<gbrowseImage1> name=NC_008396:10413660..10415927 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10413660..10415927 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcggccgccgtgctgcgacaaggcgaacgtgaagaaggggccgtggacggcggaggaggacgccaagctgctggcgtacacctccacccacggcaccggcaactggacctccgttcctcagcgagcaggtttgaagaggtgcgggaagagctgcaggctgaggtacaccaactacctgaggcccaacctgaagcacgagaacttcacgcaggaggaggaagagctcatcgtcaccctccacgccatgctgggcagcaggtggtcgctgatcgcgaaccagctgccggggaggacggacaacgacgtgaagaactactggaacaccaagctgagcaagaagctgcggcagcgtggcatcgaccccatcacccaccgccccatcgccgacctcatgcagagcatcggcacgctcgccatccgcccccctcccgccgccggcgccgcgccgccgccctgcctcccggtgttccacgacgcgccgtacttcgccgccctgcagcatcagcatcagcagcagcaggtcgtcacgcacgtcgacgccgacgcgcccgcgtcgcccgactcgcagcatctgcagctcaactggagcgacttcctcgccgacgacgccgcggggcacggcgccgacgcgccggcgccgcaggctgctctcggccagtatcaggaggggtcagcaccggcggcgactgccgtcgtgggcggaggccgcgcgttcggtgacgtcgacggtgcatcagctggcgtcggcgccggcacggacgacggcgccggggctgcgtcggcgttcattgacgcgatcctcgactgcgacaaggagatgggggtggaccagctcatcgccgagatgctcgccgacccggcatactacggcggcggtggcggctcctcctcgtcggagctcggctggggttgctaa</cdnaseq>

Protein Sequence

<aaseq>MGRPPCCDKANVKKGPWTAEEDAKLLAYTSTHGTGNWTSVPQRA GLKRCGKSCRLRYTNYLRPNLKHENFTQEEEELIVTLHAMLGSRWSLIANQLPGRTDN DVKNYWNTKLSKKLRQRGIDPITHRPIADLMQSIGTLAIRPPPAAGAAPPPCLPVFHD APYFAALQHQHQQQQVVTHVDADAPASPDSQHLQLNWSDFLADDAAGHGADAPAPQAA LGQYQEGSAPAATAVVGGGRAFGDVDGASAGVGAGTDDGAGAASAFIDAILDCDKEMG VDQLIAEMLADPAYYGGGGGSSSSELGWGC</aaseq>

Gene Sequence

<dnaseqindica>1611..2268#312..441#1..133#atggggcggccgccgtgctgcgacaaggcgaacgtgaagaaggggccgtggacggcggaggaggacgccaagctgctggcgtacacctccacccacggcaccggcaactggacctccgttcctcagcgagcaggtcgtgaaaatcaacgatatcgatcgccgttgctgctgctgccgatgggatcgagattgcaattagagacgcatttgatcacatcagatcagatcaaaatatggtgtcattgtttatcacttttttttcccttttgttttgttctgtaaaaattgcatggggggtgatgtgggtgcaggtttgaagaggtgcgggaagagctgcaggctgaggtacaccaactacctgaggcccaacctgaagcacgagaacttcacgcaggaggaggaagagctcatcgtcaccctccacgccatgctgggcagcaggtatatcatcgtgttacgctcagcttgtcccgttatctcgtcatttcagacgtcaccatgcttttgcatgtgtggtgagtggtgtaatacactccgtccgttggaccctcctgcttgattgatctgtcgttgctgttttcgaattgataatccacgtgctagtttgtcatcgactcagatttggcgaatcggtgttcgtgatttgtatctgatttctgcgtgtaatgctaagcatgttgcgaactaccttgatcctataataagcgtaattataggtttcagtgtccaactttatctaacaatcttatttaaaatattttaatgattagtattttttttattgttattagatgataaaatatgaacagtactttatgcgtgtcttaacttttaaaaaaaattcataaactttttaaataagacggacaattaaatgttgggcacgtaaacttatagctgcacgtataataagacggagggagtaattcccttgaatcctaacatgagataaatagctagtgcacataattggctgctctaatgtactttggcagtatgatgctgatgcaattagcatttacatttaatgttctaaaaattttatggaatcaacctagatgtgaacgaaaatggcatgacaaaataatcaagatccctgagcggtaacaaactgatacacacacaatgcatgtaacgccactattcacagttaattagtactgtactactaattaacttagttaatactagcactagttattttacactctaaacaaatgctgcgagatcatctctaccctcaatcagaaatgggagctagtttgacacatcaacacacaatttggactgagatcattgagcatgcatgtaatttctactccatccgtttcagattataagatattttaactttgatcaaagttaaactgttttaaatttgactaagtttatagacaaatatagtaatatttacattaccaaattagttttattaaattaataataaaatatatttttataataaatttatcttaagtcaaaaatattattattttttctatcaaattaatcaaacttgaagcagtttaacttttatctaagtcaaaaacatccgagggagtataaccaaagttgtgcgcgtgcatcaatcaaatgcgcgtgattggcaggtggtcgctgatcgcgaaccagctgccggggaggacggacaacgacgtgaagaactactggaacaccaagctgagcaagaagctgcggcagcgtggcatcgaccccatcacccaccgccccatcgccgacctcatgcagagcatcggcacgctcgccatccgcccccctcccgccgccggcgccgcgccgccgccctgcctcccggtgttccacgacgcgccgtacttcgccgccctgcagcatcagcatcagcagcagcaggtcgtcacgcacgtcgacgccgacgcgcccgcgtcgcccgactcgcagcatctgcagctcaactggagcgacttcctcgccgacgacgccgcggggcacggcgccgacgcgccggcgccgcaggctgctctcggccagtatcaggaggggtcagcaccggcggcgactgccgtcgtgggcggaggccgcgcgttcggtgacgtcgacggtgcatcagctggcgtcggcgccggcacggacgacggcgccggggctgcgtcggcgttcattgacgcgatcctcgactgcgacaaggagatgggggtggaccagctcatcgccgagatgctcgccgacccggcatactacggcggcggtggcggctcctcctcgtcggagctcggctggggttgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0296000, RefSeq:Os03g0296000