Os03g0300700

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Revision as of 12:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0300700| Description = Retrotransposon gag protein family protein| Version = NM_001056395.1 GI:115452518 GeneID:4332571| Length = 1303 bp| ...")
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Gene Name

Os03g0300700

Description

Retrotransposon gag protein family protein

Version

NM_001056395.1 GI:115452518 GeneID:4332571

Length

1303 bp

Definition

Oryza sativa Japonica Group Os03g0300700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10626061..10627363

Sequence Coding Region

10626325..10627059

Expression

GEO Profiles:Os03g0300700

Genome Context

<gbrowseImage1> name=NC_008396:10626061..10627363 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10626061..10627363 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgaagctggaccgcatcgcggagcagctgaaggcgctgcccttgctcagccaggtggtcgaggggcaccaacatcgcctcgaggagctgtccaagcagatcgccgttgcggcggcgctggtggaggacgtgaagaaggagcaggcggcggcggcggcgtcgcgcgccgccaggatcgacggctactcgggagggttctttcgtctggcgaagctgaagttccccactttcagcgggacgttcccgcgcctgtggatcaccaagtgcacgcgctacttcgagttctacggcatgccaatgaagatgtgggtttcctgggcttcgatgcacatggaggggatggctgagctgtggatgatgacctatgagaagcgccatgagcgtgattggggtcggttctgtgaggccgtggaggagagatttgggccctatgatcacaagcagaagctcacggcactcttggatctgaggcaggaggggatcatgacagtgagcgagtacagagaccagttcgaggagcgcttgtaccatgccaagctgttcgatccagtctccagcaactgcttcgacgtggcattattcataagaggcctgcgagaagagatcagagataggatgtggcagcaaactcctgctaccgtggatgctgctgcccaatcggctctggtgcaagaggcgttgtataacttggaaatgcagagagctcagagggacccgtataaagaatga</cdnaseq>

Protein Sequence

<aaseq>MEAKLDRIAEQLKALPLLSQVVEGHQHRLEELSKQIAVAAALVE DVKKEQAAAAASRAARIDGYSGGFFRLAKLKFPTFSGTFPRLWITKCTRYFEFYGMPM KMWVSWASMHMEGMAELWMMTYEKRHERDWGRFCEAVEERFGPYDHKQKLTALLDLRQ EGIMTVSEYRDQFEERLYHAKLFDPVSSNCFDVALFIRGLREEIRDRMWQQTPATVDA AAQSALVQEALYNLEMQRAQRDPYKE</aaseq>

Gene Sequence

<dnaseqindica>305..1039#ggagaagtgcccaccgcttccgcgtgctccgccgcagcaggttgcagcgcaaccggcgacgccgacgagacgagacgatcgaacgaaggccaaggtgaggtcgtagcaaccaccccttctcgacccgcgccatgattttctttttctcttttagtgttctttatttattcgtcttcttcatggtttatttgatctttgaaaacctaattatttgtctcgttcgcggacgcctccgacctcatcggacctgatttgtctcgaaatttctgggccgcagcaacctacggttctccccgacggcaagatggaggcgaagctggaccgcatcgcggagcagctgaaggcgctgcccttgctcagccaggtggtcgaggggcaccaacatcgcctcgaggagctgtccaagcagatcgccgttgcggcggcgctggtggaggacgtgaagaaggagcaggcggcggcggcggcgtcgcgcgccgccaggatcgacggctactcgggagggttctttcgtctggcgaagctgaagttccccactttcagcgggacgttcccgcgcctgtggatcaccaagtgcacgcgctacttcgagttctacggcatgccaatgaagatgtgggtttcctgggcttcgatgcacatggaggggatggctgagctgtggatgatgacctatgagaagcgccatgagcgtgattggggtcggttctgtgaggccgtggaggagagatttgggccctatgatcacaagcagaagctcacggcactcttggatctgaggcaggaggggatcatgacagtgagcgagtacagagaccagttcgaggagcgcttgtaccatgccaagctgttcgatccagtctccagcaactgcttcgacgtggcattattcataagaggcctgcgagaagagatcagagataggatgtggcagcaaactcctgctaccgtggatgctgctgcccaatcggctctggtgcaagaggcgttgtataacttggaaatgcagagagctcagagggacccgtataaagaatgagatgccggcctctgtcgatttgctccggtgaactgtgggagtagtgctactgtgttgtttttatcatgtcgatggtctttggttcgattatgctgattagtttgaggaaggtccttgggaattttgggattcagttatttctagcatgtcgatggtctttggttcgattgtggtgctcagtctgaagaaggtccttaggatttttgggattcagttatgcgttgcttctgaagatcttggttagttggttagatgcgaattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0300700, RefSeq:Os03g0300700