Os03g0302900

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Revision as of 12:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0302900| Description = Conserved hypothetical protein| Version = NM_001056408.1 GI:115452544 GeneID:4332585| Length = 4454 bp| Definition ...")
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Gene Name

Os03g0302900

Description

Conserved hypothetical protein

Version

NM_001056408.1 GI:115452544 GeneID:4332585

Length

4454 bp

Definition

Oryza sativa Japonica Group Os03g0302900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10734978..10739431

Sequence Coding Region

10735419..10735554,10735643..10735701,10735803..10737578,10738359..10738503,10738594..10739312

Expression

GEO Profiles:Os03g0302900

Genome Context

<gbrowseImage1> name=NC_008396:10734978..10739431 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10734978..10739431 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacggagaaaggtggagcaaagattggtggcggcggcggaggaggaggaggaggaggaggtgggggtgggctgttcaacctgtttgactggaagcgcaagtcccggaagaagctgttctccaactcacccgagggtgctaagctcgtgaagagaggcgaagaaaccttgccgtctgggcgcctccacttgattgatgatgatgaggggattggtgtgtcaagcttcaaagggagcagcgactacagctgtgcttcctcggttactgacgaggaagggcgtgagatgaaggcgccaggagtggtggccaggctcatgggcttggatgccatgccctctaccggggtcccggagccgtactgcacaccattccgtgacacacggtcgtttagggacagccagagcctaaagagaagcccagagtactccgggagtgaccagttcagttatgtgccacgaagagttgatggctacatgaggaagccattggatctgagagctcagaagatgccgagcagcccgattgagaggttccagatagaaacattgccgccaaggtcagccaaacccttaccaatgtcccatcacagattgttatctccaatcaagaatccgggatttagttcagcaagaaatgcggctcaaatcatggaggcagcagccaagattcttgagccaaggccacaggtcagttctagggagaaaatctgctcatacagtcctgcgcggattcctttgaggatttctgagacacgggagaatatcccagcttctcagagggcagtgtctcggcagctgcagtcatctcggaccaatcttgagctgcctgatgtgagattttccagggggcagcaaatgaacaggagctggaatagcgaagatgacatagtgatctttaggacttcatctgattcttatgagattaataaccctggcttttcaaagaacaacaaggggaagtccatttcattggcactgcaggcaaaggtgaatgtgcaaaagagagaaggattgggttcttctgggaagaattcaggaggacagaaagatcgtgatgagtgcagaacaagccaaccttttaggagtcagtccaatgcccagaagaataagcagcagaagaagccgtcatcatcaggtacttcctcccctgtccttaggcaaaacaaccagaaacaaaattctatggtaagcagaggaaagtcagcaccaaacaaatcagtctcaagccagcaaggtagaaagatggctggagattcctcaactgggaagctgaagaatgcaagcaaaatatctaaaggtggcagcagaaaggatattgtagaaagcataagttgtgataaggaaggttcatcgtcaaacaacaaggactttccacaaaagaagcgtttgatagagaggaactccaccaatgagaagggtatgttcgtgcctgaaaaatcagcagctagacttcagaagcaagttcaacctaatgttgtcatggatgagcacattaagtggaacaacgatagtaaagattctacagatgtagtatcatttacctttacctcaccattggttaaaccatcagcaggaccctccagactgtcagggaagtgggatacaagaagcaattttaatttggatgccataaatgagaaggatgattcagacaaaaagtccgaagggctctcatcagtaggattgaactttgtaaatggtgatgctttgagccttctcctagaaaagaaactaaaggagctaacatcaaagattgagccatccatcaactttactaggggcgacacatttgtgcccgcaaacttttccttggaagagcccgtggtctcctcttccagcaattgggatatggaaagcggagtatttgactgcagcccttctgaaggaaaaccttctcaatatgttgattattgccaatcagcgcagtcatcaaccaaaggccaaattttccgtggaagtaaattacaggtggaggaaccagaagaatgcagcagcataagcaacgcaaggaaagaacaggagcatgaagatttaagtcccctctctgttcttgaaccaacctttctaaatgagagttgctggtcttctgattgctgctcaggcagtagcgatggaagcaaaggatattcatcatcttctgaagttaaaaacatgccaaagaatttcctaagcaatccaccatcagtggatgctgaggccaagacaacagattcagtgtcttcttcatcgattgatgcatcagacacctcagcatcaatagatgcgtcggacatctcagatatcacccaatgttcaaagaaatctagaaactcagagctggagtacattggggatgttctaggcaatgtcaacctgacaaagggtggattggggtcattattcatcagtcaagatgatgtatcggtgatggacccccacctctttaacaaattggagagcatgaacttgtatacacaagggaaaaaaaatttggaccggcgagggtacagaaagctcctgttcgactgcgtaagtgaatgcctggagacgagacgtctcacatacttcagggcaggatatgcagcatggagcaaagggatggcagcgatgagcaggggcatagaaactgaagtctgcaatgagataggtggttggaggagcatgggcgaatgggtggaggatgaacttgtcgacaaggacatgagcagtgggctgggcacatgggttgattttcgggtggaggagttcgagacaggagaagagttggagagggaaatactgagctcactggtcgacgaggtgatcggcgacgtctttgtgagacgacgggacggcaggagtgtaaatttgtaa</cdnaseq>

Protein Sequence

<aaseq>MGTEKGGAKIGGGGGGGGGGGGGGGLFNLFDWKRKSRKKLFSNS PEGAKLVKRGEETLPSGRLHLIDDDEGIGVSSFKGSSDYSCASSVTDEEGREMKAPGV VARLMGLDAMPSTGVPEPYCTPFRDTRSFRDSQSLKRSPEYSGSDQFSYVPRRVDGYM RKPLDLRAQKMPSSPIERFQIETLPPRSAKPLPMSHHRLLSPIKNPGFSSARNAAQIM EAAAKILEPRPQVSSREKICSYSPARIPLRISETRENIPASQRAVSRQLQSSRTNLEL PDVRFSRGQQMNRSWNSEDDIVIFRTSSDSYEINNPGFSKNNKGKSISLALQAKVNVQ KREGLGSSGKNSGGQKDRDECRTSQPFRSQSNAQKNKQQKKPSSSGTSSPVLRQNNQK QNSMVSRGKSAPNKSVSSQQGRKMAGDSSTGKLKNASKISKGGSRKDIVESISCDKEG SSSNNKDFPQKKRLIERNSTNEKGMFVPEKSAARLQKQVQPNVVMDEHIKWNNDSKDS TDVVSFTFTSPLVKPSAGPSRLSGKWDTRSNFNLDAINEKDDSDKKSEGLSSVGLNFV NGDALSLLLEKKLKELTSKIEPSINFTRGDTFVPANFSLEEPVVSSSSNWDMESGVFD CSPSEGKPSQYVDYCQSAQSSTKGQIFRGSKLQVEEPEECSSISNARKEQEHEDLSPL SVLEPTFLNESCWSSDCCSGSSDGSKGYSSSSEVKNMPKNFLSNPPSVDAEAKTTDSV SSSSIDASDTSASIDASDISDITQCSKKSRNSELEYIGDVLGNVNLTKGGLGSLFISQ DDVSVMDPHLFNKLESMNLYTQGKKNLDRRGYRKLLFDCVSECLETRRLTYFRAGYAA WSKGMAAMSRGIETEVCNEIGGWRSMGEWVEDELVDKDMSSGLGTWVDFRVEEFETGE ELEREILSSLVDEVIGDVFVRRRDGRSVNL</aaseq>

Gene Sequence

<dnaseqindica>442..577#666..724#826..2601#3382..3526#3617..4335#gtgttgttattactccttggatcgactcggccagcataaatgccccgcctttaatggcttccccgatctgatgcttccgccctccgcttctcgcctcgccgccgccgctgccgagaataccgccgctgcggcgctccacgtcgtcgccgtcgccgcgaggccacgtcggtaggcaggtactcccccgtgttcttctccccgctctctgttgttaggctcgtgttgcgtcgcgatcgatttgatgaggtgtttgtggctccgatccgttggtttctgtacgggtgaggtgaggtggatttttatgattgattttgtggtaggtgttgtattggtgattttttgttgcgggggatcgagcggatcggatgctgaagaacgggggagaaaagtgttggttttaagtagagattgtttgggatttgaagggagttgctacgagcgatggggacggagaaaggtggagcaaagattggtggcggcggcggaggaggaggaggaggaggaggtgggggtgggctgttcaacctgtttgactggaagcgcaagtcccggaagaagctgttctccaactcacccggtaggtgttcgctggaatgcctcgctagttttgttcttcctctgttgccgtgctttcttagccttttttcgcgtcatctttgttacagagggtgctaagctcgtgaagagaggcgaagaaaccttgccgtctgggcgcctccacttggtgagtgatctctgatcttgtcgttgcccttgctctgcgctgtgatttgcattgtgccgtggaacttgtgttcatgggtgtttgcggtattgtatctgcagattgatgatgatgaggggattggtgtgtcaagcttcaaagggagcagcgactacagctgtgcttcctcggttactgacgaggaagggcgtgagatgaaggcgccaggagtggtggccaggctcatgggcttggatgccatgccctctaccggggtcccggagccgtactgcacaccattccgtgacacacggtcgtttagggacagccagagcctaaagagaagcccagagtactccgggagtgaccagttcagttatgtgccacgaagagttgatggctacatgaggaagccattggatctgagagctcagaagatgccgagcagcccgattgagaggttccagatagaaacattgccgccaaggtcagccaaacccttaccaatgtcccatcacagattgttatctccaatcaagaatccgggatttagttcagcaagaaatgcggctcaaatcatggaggcagcagccaagattcttgagccaaggccacaggtcagttctagggagaaaatctgctcatacagtcctgcgcggattcctttgaggatttctgagacacgggagaatatcccagcttctcagagggcagtgtctcggcagctgcagtcatctcggaccaatcttgagctgcctgatgtgagattttccagggggcagcaaatgaacaggagctggaatagcgaagatgacatagtgatctttaggacttcatctgattcttatgagattaataaccctggcttttcaaagaacaacaaggggaagtccatttcattggcactgcaggcaaaggtgaatgtgcaaaagagagaaggattgggttcttctgggaagaattcaggaggacagaaagatcgtgatgagtgcagaacaagccaaccttttaggagtcagtccaatgcccagaagaataagcagcagaagaagccgtcatcatcaggtacttcctcccctgtccttaggcaaaacaaccagaaacaaaattctatggtaagcagaggaaagtcagcaccaaacaaatcagtctcaagccagcaaggtagaaagatggctggagattcctcaactgggaagctgaagaatgcaagcaaaatatctaaaggtggcagcagaaaggatattgtagaaagcataagttgtgataaggaaggttcatcgtcaaacaacaaggactttccacaaaagaagcgtttgatagagaggaactccaccaatgagaagggtatgttcgtgcctgaaaaatcagcagctagacttcagaagcaagttcaacctaatgttgtcatggatgagcacattaagtggaacaacgatagtaaagattctacagatgtagtatcatttacctttacctcaccattggttaaaccatcagcaggaccctccagactgtcagggaagtgggatacaagaagcaattttaatttggatgccataaatgagaaggatgattcagacaaaaagtccgaagggctctcatcagtaggattgaactttgtaaatggtgatgctttgagccttctcctagaaaagaaactaaaggagctaacatcaaagattgagccatccatcaactttactaggggcgacacatttgtgcccgcaaacttttccttggaagagcccgtggtctcctcttccagcaattgggatatggaaagcggagtatttgactgcagcccttctgaaggaaaaccttctcaatatgttgattattgccaatcagcgcagtcatcaaccaaaggccaaattttccgtggaagtaaattacaggtaaacaatagcacagagccacacactacccctgttagaacaaaagtatacttccatgctggcaggaataatcattttttcagtctatattcatcatttatctttgacaaaacattttttgaagaacttcctctttatgttaaaatagaaaatttggtcagcatatccattacatatttaaatagcatttttagggcctaatgtttttacttgaaatctttattttcaatgattgaacactcatttgctgcatactggggaccaccctaatgtttatgaagaaacatcaagcttccctccataaatctgtaaattccgtcattgtgttattgaagaaaaagatgatacagttccaaccttctgcaggctgacatttttttactgttttttgaagtttgaactctctgttgtgttgaacataaacattataagtgtgtatttatgatttaagtgattccattaccagctctcgtcatttgttcattatgcttgtcttctccaccttgatcctcgaatattttgcttctcgggtagttaggtgttggtgctgagccatgtacatgtccagtagatttctctgtgttatggcacatagattattctattatactagtgttattgattttggtatgtctgtttgtgtggcatctcctagctagtgttattttatttctgagaaaattcacatctgggtgtagtatttgttatgctatgtctgtttatgtgggcatcacctagcttgagttattttagttctgaagaaattccatttcatcttaggtggaggaaccagaagaatgcagcagcataagcaacgcaaggaaagaacaggagcatgaagatttaagtcccctctctgttcttgaaccaacctttctaaatgagagttgctggtcttctgattgctgctcaggcagtagcgatggtaattcaacttattgaaattctataatttgtaatttctaactgtaccatttaccttttcctgagtctaagtcatgcttagtctttacaggaagcaaaggatattcatcatcttctgaagttaaaaacatgccaaagaatttcctaagcaatccaccatcagtggatgctgaggccaagacaacagattcagtgtcttcttcatcgattgatgcatcagacacctcagcatcaatagatgcgtcggacatctcagatatcacccaatgttcaaagaaatctagaaactcagagctggagtacattggggatgttctaggcaatgtcaacctgacaaagggtggattggggtcattattcatcagtcaagatgatgtatcggtgatggacccccacctctttaacaaattggagagcatgaacttgtatacacaagggaaaaaaaatttggaccggcgagggtacagaaagctcctgttcgactgcgtaagtgaatgcctggagacgagacgtctcacatacttcagggcaggatatgcagcatggagcaaagggatggcagcgatgagcaggggcatagaaactgaagtctgcaatgagataggtggttggaggagcatgggcgaatgggtggaggatgaacttgtcgacaaggacatgagcagtgggctgggcacatgggttgattttcgggtggaggagttcgagacaggagaagagttggagagggaaatactgagctcactggtcgacgaggtgatcggcgacgtctttgtgagacgacgggacggcaggagtgtaaatttgtaatctgatctcgagtgttgttgtttttgttctgtaattttgttttgttaagttatatccatccctatttgatttgtcgaccagacttgatcaaatcagttatatatatgtgttgatttgag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0302900, RefSeq:Os03g0302900