Os10g0194200

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Revision as of 08:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0194200| Description = Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)| Version = NM_001070818.1 GI:115481379 GeneID:4348242| Leng...")
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Gene Name

Os10g0194200

Description

Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)

Version

NM_001070818.1 GI:115481379 GeneID:4348242

Length

3344 bp

Definition

Oryza sativa Japonica Group Os10g0194200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:6221385..6224728

Sequence Coding Region

6222352..6222446,6222829..6222942,6223093..6223320,6223580..6223865,6224032..6224182
,6224297..6224493

Expression

GEO Profiles:Os10g0194200

Genome Context

<gbrowseImage1> name=NC_008403:6221385..6224728 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:6221385..6224728 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agtggcatggctgctgaatgtggaagtggcaactgtgatgcttgggcagcgagagatccttcagggatcctctccccgtacaagttcaaccgcagggctgtacaaagtgacgatgtttccttgaggatcacacactgtggtgtttgttatgctgatgttgcatggacaaggaatatactcaacaattcgatgtaccctttagtccctgggcatgagatagcaggagttgtaactgaggttggtgcagacgtcaagagcttcaaagtgggtgaccatgtaggtgttggcacatacgtgaattcatgccgggactgtgagaactgcaatagctctctagagaactactgctcacaacatgtcttcactttcaatggtgttgacactgatgggactgtcacaaagggaggatattctactcacatagtagtacatgagaggtattgctttaaaatacctgatggctaccctttggaaaaggcagcacctttactttgtgctggcatcactgtatatagtccgatgatgcggcataatatgaaccagccagggaagtcactcggcgtcattggacttggtggcttgggtcacatggcagtaaaatttgggaaagcctttggactgaaagtcacagttattagtactagtgaatcaaagagaaaagaagctattgaccttcttggtgcagataatttcgtggtgtcatcggatgaaaatcagatggagaccttgaaaagctctctgaacttcattattgacacagcctccggcgatcacccattcgatccttatctcacgcttctgaaagttggtggtgtaatggcactacttagcttcccaagtgaaatcaaagtgcatcctgcaaaccttaatctcggtgggcggagtttatctggtagtgtaactggaggtacgaaggacatccaggagatgataaacttctgtgcggcaaacaaaatctacccagatatcgagatgatcaagatagattacatcaacgaggctcttcagaggcttgttgaccgggatgtcagatttcgctttgtaatcgacattgagaactcgttcaagtag</cdnaseq>

Protein Sequence

<aaseq>SGMAAECGSGNCDAWAARDPSGILSPYKFNRRAVQSDDVSLRIT HCGVCYADVAWTRNILNNSMYPLVPGHEIAGVVTEVGADVKSFKVGDHVGVGTYVNSC RDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKA APLLCAGITVYSPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVISTSESK RKEAIDLLGADNFVVSSDENQMETLKSSLNFIIDTASGDHPFDPYLTLLKVGGVMALL SFPSEIKVHPANLNLGGRSLSGSVTGGTKDIQEMINFCAANKIYPDIEMIKIDYINEA LQRLVDRDVRFRFVIDIENSFK</aaseq>

Gene Sequence

<dnaseqindica>968..1062#1445..1558#1709..1936#2196..2481#2648..2798#2913..3109#agggccgtaaaggaaaatcttccgtgtcgtcgtctcctccgctccttgcgccaagacgagtcgcggctcaacagcggagaggcggcgatctcccatctggcgagcagagcaggggaggggaagggatcttggtgagcatccacatcctcttcctgactcatctctctcccaccgggagtacttctgtctggaatttgcttgcgttaaccctagcttctgttctaggtttggaagaagctcttctcttaatttcagagccttaatcttaatacaagtgacagtttgtttgttccccaaaaagctgaatccgcccctgtccagtggtacgaattcagtttctgtagctgccagaagaagtaaattaaatttcatgttataccatgttctgaaactctcaagaatgttgatggaagttgatggggttctagtgtataaaactggatcagtatttctggttattgattgggtttcacaaactgtggaagtataaattggatattatagagtacaaggagcagagatggggcctaacacatgacacgtgcgttacaaaggagaactggagaagaggtggattccttctcaaattccccgcccacagattcccatctccaacctccatctccgtctcctcagagatccacatagcgactcccgatccagactaagcttgcaaaactcccttgccccagcagcgtcgacagtgtggtgctgaccggcggcttctgatcaaaatagtcagttggattggtcctgtcctgtcctgtcctggtcctgaacctctaatctcttcatttcaaaacgaatagatgactggattcattttcctgcattttaaactactggtttttctttttgttgtttttgacattgttcattgctgatataagtatcaggggtataagattatgatggatttatggcattatgggttcatctgagttgatttttttctatctgcagttagagtggcatggctgctgaatgtggaagtggcaactgtgatgcttgggcagcgagagatccttcagggatcctctccccgtacaagttcaaccgcaggttaaatcacactacactcccttgtgtattgattttcctttttattttcttgatatgaatgtctttccagcactgttaagaaatcttccttgtttccaagtgttttctctaactgcagaatgcactattctggcaactagaatcatcacgattgcagtttcagttagctgtgtgcttatctggaacaagaatgtgaacttgtcaagttacctgttttgaattttctaacttttgcgcaacatgataaactggattacaaaatctctatagtactttgctgaatgttgtgattaactactcacagacaagattttaaaatgatcttttccatttttagtacctattcttatgaattgttaataacctggtttattattaccagggctgtacaaagtgacgatgtttccttgaggatcacacactgtggtgtttgttatgctgatgttgcatggacaaggaatatactcaacaattcgatgtaccctttagtccctgggtaaaattattaactttgttacttgaattttaacaaaagtatggaaaagaataaacttctgttacagactataaattcatccatttagctactgtatttgttgtaaagataaaagttcatgaaattgtgtctaaatttcaatatgagtaggcatgagatagcaggagttgtaactgaggttggtgcagacgtcaagagcttcaaagtgggtgaccatgtaggtgttggcacatacgtgaattcatgccgggactgtgagaactgcaatagctctctagagaactactgctcacaacatgtcttcactttcaatggtgttgacactgatgggactgtcacaaagggaggatattctactcacatagtagtacatgagaggtatggattttgaccatgttttcttctgaaagttttctgacaagacaacgaaaaatttcatatacttatttctaatggttgctcaacaatgttgtcacaaaatcatcctacattctgctatgtaaattttatataggaaacaaatcccatgatgttctgctaatgtctctcttatgaatatagcagctattagttattcctgtttacttaattcaaaaaagaacctatgagaaaattgcatcttcctttggaatggcaggtattgctttaaaatacctgatggctaccctttggaaaaggcagcacctttactttgtgctggcatcactgtatatagtccgatgatgcggcataatatgaaccagccagggaagtcactcggcgtcattggacttggtggcttgggtcacatggcagtaaaatttgggaaagcctttggactgaaagtcacagttattagtactagtgaatcaaagagaaaagaagctattgaccttcttggtgcagataatttcgtggtgtcatcggatgaaaatcagatggaggtaatacacattctacattatgttttaccccattgttcacagttatctactatgaccataccatgagtcttatcagtcaaatgccatttggtaaagatagctaacctgtacttctcatttatcttacgtactgaaagtggtaatgacagattcttcattgttgcagaccttgaaaagctctctgaacttcattattgacacagcctccggcgatcacccattcgatccttatctcacgcttctgaaagttggtggtgtaatggcactacttagcttcccaagtgaaatcaaagtgcatcctgcaaaccttaatctcggtaatgcacgtttctcataccaaaatatatatggctttttccagagaggaaatatatctgtctgctaggatggggagaaaattaattaattacaactaatctggactcatgtaggtgggcggagtttatctggtagtgtaactggaggtacgaaggacatccaggagatgataaacttctgtgcggcaaacaaaatctacccagatatcgagatgatcaagatagattacatcaacgaggctcttcagaggcttgttgaccgggatgtcagatttcgctttgtaatcgacattgagaactcgttcaagtagtatcttgatatcttcagtacaccattaatgatagaagtgtatgcaataataataagtttaaatgtcctacaagatgatgagaccatgagacagttccagaacaaaatgttccattttaagaagcaatttggttctgttttcagttattttcaggagtaaattgtattggtggtacacaaacttatttggtgggtgtaatttaatacataaacttgtttgttgggtgtaatttagt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0194200, RefSeq:Os10g0194200