Os03g0306200

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Revision as of 12:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0306200| Description = Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)| Version = NM_001186459.1 GI:297722048 GeneID:927223...")
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Gene Name

Os03g0306200

Description

Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)

Version

NM_001186459.1 GI:297722048 GeneID:9272235

Length

2646 bp

Definition

Oryza sativa Japonica Group Os03g0306200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10904892..10907537

Sequence Coding Region

10905248..10905733

Expression

GEO Profiles:Os03g0306200

Genome Context

<gbrowseImage1> name=NC_008396:10904892..10907537 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10904892..10907537 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgcccagaagccgtgcaggttgtacgagttctcgaggaacaccttggcgccccaccggtggcgctgcgtcacgaggaggaagacgagcgccgactggtcgtcggcctcgtacggcggccggttggtgagcgtctcggcgaagatcttgccgtacatgtcgcggacggggcccggcggccccatgggcgcccaggcgtcgagcaggtcgagcgaccactggcagttgcggatgatgaagctgccggcgttgaggccgagccacgtcttggcgccgtacacggcgccgtcccatccgtggatgacgaggttgtggcgcctgtacctgccccacggcggctcgaacagcatgtcggtgaacaccacgtcggagtccacccaccagagcagctccgtctccgggtgcgccagcatcagcgcgcgcagcagcggcagcttcgtccagaacccggacatctcggcgtcgagcaccgtgttgctgtag</cdnaseq>

Protein Sequence

<aaseq>MSAQKPCRLYEFSRNTLAPHRWRCVTRRKTSADWSSASYGGRLV SVSAKILPYMSRTGPGGPMGAQASSRSSDHWQLRMMKLPALRPSHVLAPYTAPSHPWM TRLWRLYLPHGGSNSMSVNTTSESTHQSSSVSGCASISARSSGSFVQNPDISASSTVL L</aaseq>

Gene Sequence

<dnaseqindica>357..842#gtcattacatgggcctggctgctctggatgtcttctttttgcgggctttgaatgttgggtgcagtaggcggccgagctcctggttgtcggcgtccagcggccggccggtgtcgttcctgacgcggcgcacggccatggtgtcgagcgactcgtgcgcgaacccgtacagctccagtatctggtcgtcggcgaagttgaaggcccggtccatgcctcgccggcagcgctccccgtcgtagctcgcgtcgtccccgccgcacggcttgcagccgacgaagtgcgtgatcagcggccaccggtcgtcgccgagccccgggtggcgccactgccgccgcatctcctcgtacctgtcgacgatgtccgcccagaagccgtgcaggttgtacgagttctcgaggaacaccttggcgccccaccggtggcgctgcgtcacgaggaggaagacgagcgccgactggtcgtcggcctcgtacggcggccggttggtgagcgtctcggcgaagatcttgccgtacatgtcgcggacggggcccggcggccccatgggcgcccaggcgtcgagcaggtcgagcgaccactggcagttgcggatgatgaagctgccggcgttgaggccgagccacgtcttggcgccgtacacggcgccgtcccatccgtggatgacgaggttgtggcgcctgtacctgccccacggcggctcgaacagcatgtcggtgaacaccacgtcggagtccacccaccagagcagctccgtctccgggtgcgccagcatcagcgcgcgcagcagcggcagcttcgtccagaacccggacatctcggcgtcgagcaccgtgttgctgtagaagatgtcgaagccgtggacgcggcagtagtccaccttgttcttgagcgcgcggaggagcaggtggtcgccctcgggatccttgcaccgccgcggcgccgacccggtcaccatcagcacccgcggccggccccgccccaccgacgccgggaactccgtgtgatcgcgcagccactccgctctgcgcgcgtcgtagcccgtcacggccgggccgagcgtgtacgggctgtccgtcagctgccgcagccgccggagcgaccgttgcgtgtcgctgtgatcatcgaccacaggcagagctggcggaggtggtgatgatggcggaggcggtggaggcggaaacgacaacggtggcggcgacgacgacggtggtgaaggtggtggcggcgacgtgtccgctgccaccgcggtgatcgtcggagcgtcacggcgagcgtactcgatgcggatgcgggggagcggcacgtcgccggacgtgaagaagaagatggtgcacggggcgaggagcagcagcacgatcgggaacaccgggaagctgagcagcagccgctggtgacgcgctcggcggccgacgtcggccgccgcctcgccaccgtggcggtcctgcaacttcgacatgatccccgcctcagccacacactcgagtcagcagctgcaggtaacacgttcgcatcaagcacactcaccacgcgaactcctaatttaacacgcttgatgatgatttggggttaggaagtttcgctgtttcgtcgtattaattgtaaatacgtatacgcgcgccggcggggcttggtagggttcgtgaatgtgacgccaaaacggagcaatacaacttggaaggaatatattggctggcacgctaattctagatggttaagcatgtgtggaaccagtggttacaccggaatgcatgtggagttgtgaactgtgcgtttaagatagccacaatcgaattgattcgccaactagcagaacgggcgatgagagcactaggctggctacgttataacgccgtcaaaattctctccacttatataatatataactagaaaaattagtgcggctgttggcgcgctgtctttttagcccgtataaagagcactgaattttatatattttcttataataacttattaatttcccatttactttttgcaaacattatatatttgaaagaaccatttagtgggagtatcgtctgataattgacatgtaggtttaatttataacaaagtgaatattgcatgtgtttgataaattgacaattgaggcgacatatatgaggaataaagatgtatttttttatgaaatccataaatattttttttgttttctaaaatatctagctaaagttataaccgataatttagatgaaaaatatttctgatgttaattttccagtatatgcctaaacctgaaatttaatctatcttcattccccatttgtgctatctgctaggccaatcgtcccatttagcactgcaagtccacccaggcccatacagagaacagacccagctgtccatgctgctgatcacgcacgccagatgcttccggatgcagttttgtattttttttactacctatacatttgtcgataaattttctcttaaaaatttgtcaaatgtaaatacaatataattatattgtaattacactgtaagtatagaataattatactataacttacatgtaattacactgtaactataataattacattgttacttatatgtaattacactgtaactataatatacttgcacgtaagtgagatgtaccgttataaaacttatgtttggcactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0306200, RefSeq:Os03g0306200