Os03g0306900

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Revision as of 12:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0306900| Description = TENA/THI-4 protein domain containing protein| Version = NM_001056426.1 GI:115452580 GeneID:4332604| Length = 1911 bp...")
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Gene Name

Os03g0306900

Description

TENA/THI-4 protein domain containing protein

Version

NM_001056426.1 GI:115452580 GeneID:4332604

Length

1911 bp

Definition

Oryza sativa Japonica Group Os03g0306900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10962364..10964274

Sequence Coding Region

10962556..10962871,10962947..10963161,10964018..10964188

Expression

GEO Profiles:Os03g0306900

Genome Context

<gbrowseImage1> name=NC_008396:10962364..10964274 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10962364..10964274 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggcggcggggtcgaggcggcgatggacggcggcggggtcgaggcggcgacgacggcggcgtggatggcgcggcaccgggggatgtacgagcgggccacgaggcacccgttcaccgtctccatccgcgacggcaccgtcgacctgtccgccttcagacgctggctgggccaggactacatgtttgtgaaggaatttgttgcgtttctagctagtgtactgctcaagtgttgcagacagtcagatggctcggacatggaaataatactcggtggcttagcttcccttagtgatgagctctcttggttcaagaaggaagctgaaaaatggagtgttaatctagctgaagtttctcctctgaaatccaatacagaatactgcaggtttctccaaagcttcagcgagccagagatcagctacgttgttgccataactaccttttggataattgaaaccgtgtaccaggatagctttgctttctgtatagaagaaggcaacaagacgccacctgaactcctggggacctgccagagatggggaagccctgagttcaagcagtactgccagtctctgcagagaattgcagatcgctgcctcgcagaagcgtcagctgatgctgcgaggagtgctgaagaggccttccttcgggtgcttgagctggaaattggtttctgggacatgagctcttctcgatcatga</cdnaseq>

Protein Sequence

<aaseq>MDGGGVEAAMDGGGVEAATTAAWMARHRGMYERATRHPFTVSIR DGTVDLSAFRRWLGQDYMFVKEFVAFLASVLLKCCRQSDGSDMEIILGGLASLSDELS WFKKEAEKWSVNLAEVSPLKSNTEYCRFLQSFSEPEISYVVAITTFWIIETVYQDSFA FCIEEGNKTPPELLGTCQRWGSPEFKQYCQSLQRIADRCLAEASADAARSAEEAFLRV LELEIGFWDMSSSRS</aaseq>

Gene Sequence

<dnaseqindica>1404..1719#1114..1328#87..257#ggggtattgagctgatcagctgaacagaactgcccccaagacttgtggagttgtagcgaagctgcaagagtgacgcggcggcggcgatggacggcggcggggtcgaggcggcgatggacggcggcggggtcgaggcggcgacgacggcggcgtggatggcgcggcaccgggggatgtacgagcgggccacgaggcacccgttcaccgtctccatccgcgacggcaccgtcgacctgtccgccttcagacgctggctggtcagttcctcctctcggtctccaaaattcccccatcgcttattaggcagacaaaagatctattgtaattctcgtagaaatatcaaagttctaaatggtctgaagtgacaccgttcaattgttccttctggttagcaaaagtcctagttggtattagctgattagccaagattggaagggaggcacgatgaaggttcattgttagaatttgcagtaaaaactgtgagctgcgagaacattgttggattcagtaattgaccctattgtgttatcttgagtgttggatacttagaagatgttggtacctggccagtccagtaatagcttcaggccctagcatttctttcaattatgagcatctgactcattcttaatattgtatgaaaaatgaaaaaaaaaagctttattccaacgactgaacaaaaaaacaaatagataaaggtggttcctaaatgggggaacatatcctatgcacactcacttcccatgcacatcaactaataaatatcacggaaaattttagaaaaaaactgatatgtactcttaatagtattacacgtatctacaaaatcttatattcaaattgattatattttaactgtaacaaaaaggtgaaaaatctaacagttttaagagtaaaaatctatcagaattttgtcttttttacgactaaaatataatgaatttgaacataatatttcatagataggtgtaatactatttaaagtatgtgtccaattttttctataattttttggacatttgttagttagtgtgtacggaaaacttgtgtgcataggatatgttcccaatggatgaacggaatacaataatcacattttcatgccttactcagggccaggactacatgtttgtgaaggaatttgttgcgtttctagctagtgtactgctcaagtgttgcagacagtcagatggctcggacatggaaataatactcggtggcttagcttcccttagtgatgagctctcttggttcaagaaggaagctgaaaaatggagtgttaatctagctgaagtttctcctctgaaatccaatacagaatactgcaggttcacgcctatcaaacttttgcataactttacagctatagcaacctgaagaattatttctgtggttctaatcaggtttctccaaagcttcagcgagccagagatcagctacgttgttgccataactaccttttggataattgaaaccgtgtaccaggatagctttgctttctgtatagaagaaggcaacaagacgccacctgaactcctggggacctgccagagatggggaagccctgagttcaagcagtactgccagtctctgcagagaattgcagatcgctgcctcgcagaagcgtcagctgatgctgcgaggagtgctgaagaggccttccttcgggtgcttgagctggaaattggtttctgggacatgagctcttctcgatcatgaacggcaacagcatctcgatcatgaactacttgggagaaataatcgaataatggtgcagccggttccataccgaaccctgcagtgtactactgtgttttcctcttccttttatccccatttctctccttactcccatgaacattgatgtatcatcgtaactatgaaataaatgaaataatgccgtttcctcct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0306900, RefSeq:Os03g0306900