Os03g0310500

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Revision as of 12:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0310500| Description = CAP protein family protein| Version = NM_001056451.1 GI:115452630 GeneID:4332629| Length = 2563 bp| Definition = Or...")
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Gene Name

Os03g0310500

Description

CAP protein family protein

Version

NM_001056451.1 GI:115452630 GeneID:4332629

Length

2563 bp

Definition

Oryza sativa Japonica Group Os03g0310500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11129192..11131754

Sequence Coding Region

11129192..11129340,11129589..11129708,11129818..11130043,11130504..11130563,11130652..11130825
,11130913..11131022,11131192..11131357

Expression

GEO Profiles:Os03g0310500

Genome Context

<gbrowseImage1> name=NC_008396:11129192..11131754 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11129192..11131754 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttgaacgagcaagacgacacgcatgattccataaaacataagcctatatgggaatcttacatgcccagaaataagaaagaaaaacgaggaactggaaagaagaaacatggagatctgtaccggacttatggaaccagagtgattccagtctttgtattgtcattggctgatgttgatgctgagcttctgatggaagaggaaaatcttgtttggacaagcaaagatgttgtcattgtacttgagcataacaatgaaaaggttcctctaagttatgtgtcagaaacaactagacagttcgcttttccgtctctagcacagcgccacatcttggcaggtttagcttcagcagttggaggtctgagtgcaccatatgaaagggcatcacatattcatgaaagacctgttgtgaattggttgtgggctgctggatgccatccctttggaccattctcaaactcctctaagatcagtcaaatccttcaggatgttgcactgagaactacaatttatgctcaagttgatgctgctcttcacaaaataagggacacatcggagtttgttcaatcctttgcatcagagcatcttaagacgccattaggagaacctgttaaaggtaaacaaaacaagtccaacacagagttatgggtagagaaattctataagaaggtaacaactatgccagaacctttccctcatgagcttgttgaacgtttggaagaatacctggataggcttgaaggacaacttgtggatttatcctccttgctctatgaccatcgtctagttgatgcttatcaaaacagttctgatatcctgcagagcactatatttacacagcagtacgtagaacgtgtattgtctgcggaaagagacaagatgaagtgttgcactattgaatataatcaccccaagcagtcatcacaggcgtttgtttacggagggatccttctggctggatttcttgtctactctttggttattttcttctcttcaccagtccgctaa</cdnaseq>

Protein Sequence

<aaseq>LNEQDDTHDSIKHKPIWESYMPRNKKEKRGTGKKKHGDLYRTYG TRVIPVFVLSLADVDAELLMEEENLVWTSKDVVIVLEHNNEKVPLSYVSETTRQFAFP SLAQRHILAGLASAVGGLSAPYERASHIHERPVVNWLWAAGCHPFGPFSNSSKISQIL QDVALRTTIYAQVDAALHKIRDTSEFVQSFASEHLKTPLGEPVKGKQNKSNTELWVEK FYKKVTTMPEPFPHELVERLEEYLDRLEGQLVDLSSLLYDHRLVDAYQNSSDILQSTI FTQQYVERVLSAERDKMKCCTIEYNHPKQSSQAFVYGGILLAGFLVYSLVIFFSSPVR </aaseq>

Gene Sequence

<dnaseqindica>1..149#398..517#627..852#1313..1372#1461..1634#1722..1831#2001..2166#ttgaacgagcaagacgacacgcatgattccataaaacataagcctatatgggaatcttacatgcccagaaataagaaagaaaaacgaggaactggaaagaagaaacatggagatctgtaccggacttatggaaccagagtgattccagtgtaaacaactatcctttctccatcaacatacgcttgcctaaaaaccaaccctcactcacttgatatacagtttgaggatcaaaatgtaacttaccaagttaagagctgccccatccttaaaataatggtgtagaaaatcaaggagtatcatttgggtatagcgataaaaattttatcctaagaatgcactgttcaggcaaaagttatatcaccgctgttgctaatatttttaaaacatgaattgacagctttgtattgtcattggctgatgttgatgctgagcttctgatggaagaggaaaatcttgtttggacaagcaaagatgttgtcattgtacttgagcataacaatgaaaaggttcctctaaggtatgcaaagtttcagtacaggtctacacacataattgttctatggcttctgacatggctacatgtgttcaagtgctgctgtgtttataccctttattttgcattgcagttatgtgtcagaaacaactagacagttcgcttttccgtctctagcacagcgccacatcttggcaggtttagcttcagcagttggaggtctgagtgcaccatatgaaagggcatcacatattcatgaaagacctgttgtgaattggttgtgggctgctggatgccatccctttggaccattctcaaactcctctaagatcagtcaaatccttcaggatgttgcactggtatgttatccaatgatgcttttcctttctcctgaacataaaaacatttttatgcatcagagtgagacgtcaatggaatgcacaaaacatgttcatgcatcatcatgagacatcaatagtttatactagtaccttctatggttttatgagagcatgggagtggaggttgtcataaattgagctcaaatgtgcttccgttgcttcttgcctccttttaccaatttctgactatggtttcctgtttaagagagtagcatggacatttatttctctaattaatcgttgcaaattgtagtctatatgactgtatctagcaaatcttgatattatgcttcatgactcgtgacaatcagcatggccaggattttgtgatattttacctatgtaaaccttggtttcttcagctgttacatgtcatattcatttgcactaaatctaatgtatgcttttaaatgtgtagagaactacaatttatgctcaagttgatgctgctcttcacaaaataagggacacatcggaggtcctctggaattcaattgaacttgctttcgttttcttattttcttaacatgcgctggagactttaactcccgtctgctttggtgcagtttgttcaatcctttgcatcagagcatcttaagacgccattaggagaacctgttaaaggtaaacaaaacaagtccaacacagagttatgggtagagaaattctataagaaggtaacaactatgccagaacctttccctcatgagcttgttgaacgtttggaagaatacctggatgtaagtatttatttttgttactgcaccagtttatttttaattcaaagttctatttgcagctgattccttttttttaccccatttcagaggcttgaaggacaacttgtggatttatcctccttgctctatgaccatcgtctagttgatgcttatcaaaacagttctgatatcctgcagagcactatatttacacagcagtatgtacttttctgagacgcaagatttccctgtagctaccttttgcactttgttctgacttagacatcaaatatttcccattatatttcccttagtatttttgtgattatctgctcaatattcactattttcttataatagtcattgttaacatcttcgatttgacaggtacgtagaacgtgtattgtctgcggaaagagacaagatgaagtgttgcactattgaatataatcaccccaagcagtcatcacaggcgtttgtttacggagggatccttctggctggatttcttgtctactctttggttattttcttctcttcaccagtccgctaattcacatgcgtccagatgaagatgaccctgaattctctctagtatgacaagatggctaagcatgatagaatttgaaacgattgctgaaaagctgtcactgcgatatgcaaggtgtgcccggcctcataaggatgtcaatctgcattcagccatgactagacaatctgctgtatacgttgggggctttctcggcacagttttgtctatgagaatgtttgctctttagtacctacaggcaaccccatagttagatgattcattcggccatcataaatggccgatataatccagaggggagttcagataaggtctaatgcaggccatttacggttttcccctttgccggtatgttacgaaaaacctggtatgttaataaaacccataatcctcatgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0310500, RefSeq:Os03g0310500