Os03g0313600

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Revision as of 12:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0313600| Description = Similar to Genes for GrpE, DnaK and DnaJ, complete and partial cds. (Fragment)| Version = NM_001056464.1 GI:115452656...")
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Gene Name

Os03g0313600

Description

Similar to Genes for GrpE, DnaK and DnaJ, complete and partial cds. (Fragment)

Version

NM_001056464.1 GI:115452656 GeneID:4332642

Length

4180 bp

Definition

Oryza sativa Japonica Group Os03g0313600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11261429..11265608

Sequence Coding Region

11261569..11261733,11261826..11262005,11262171..11262386,11262468..11262650,11262788..11263009
,11263209..11263325,11263457..11263600,11263973..11264074,11264537..11264605
,11265058..11265291

Expression

GEO Profiles:Os03g0313600

Genome Context

<gbrowseImage1> name=NC_008396:11261429..11265608 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11261429..11265608 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcgccgccgttgctgaaggctccggccgccgccgccgcctccctcgtcgcggcggccgcggcccaccgcgctacggccgccgccgccgccccgtccggtgcgtcccgcgtcccgccgcgacgcttgcgctgctctgcatcaggcgccgccgccgtcgaggtgcgtgctccgatggattgggcgacgaggtcgctggaggagatgcagcgggcagaggacttcgactctttctgcctgatggggctttcgccgctggatgggcggtacgagcgctttaccagggacctgaaacccttcttcagtgagttcggcctcatcagataccgggtcatcgttgaggtaaagtggctactgaaactctcccaaatccctgagatcaatgaggtgcctccattcagcaaggaggcccagttattcctggatgcgattatccaggatttcagtgttgctgatgcaaaagaagtgaaaaagattgagaaaacaaccaaccatgatgtgaaggctgttgagtactttctcaagcaaaaatgcagctcaaatccagagattgcaaaggtgttggagttcttccattttggatgtacttctgaagatatcaacaacttgtcacatgcattagctctaaaagagggggtaaatacagttatgttccctgttatgatggacatatgcaaagcaatgtgctccttggcaacacaaaattcaaccatccctatgctgtcgcgaactcatggacagccagcatcgccaacaactctgggaaaagagatggcgaattttgcggccagattgtcaagcataggaaatagtttttctgaggtcaagatactagggaaattcgctggagctgtcggaaattacaacgctgatgttgttgcatatccagaagttgactggcctaaggttgcagaagattttgtcaaatcgttgggcttggagttcaatccttatgttacccagattgagccacatgactatatctcgaagctcttcaatctatttgttcagtttaacaatgtcttgactgatttcgatagagacatgtggacctatatatcactaggctacttcaagcagatagtaaaggctggtgaagttggatcttccacaatgcctcacaaagtcaatcccattgatttcgaaaatagtgacggcaatttgactatagccaatggtacattgtcttctttaagcatgaagctaccaatttctcggatgcagcgtgatctcacagactcgactgttttgagaaatttgggtgttggattagggcattcactcttggcttacaaagctacattgcgaggaatcaataaggttcaggtgaatgaatcccggttatctgaagacttggatcaaacatgggaggtccttgcagagccaatacagacagtgatgcgaaggtatggaatccctgaaccttatgagaagctgaaggaaatgaccagagggcaggctgtcaccaaggacagcatacggcaattcattgaagatctagacttgccagaggcggcacgatcgtcgcttctgaagctaacaccacattcttatatcggagaggcagaatttttggctagaaatatcgaagaggtggttgatctaaaatctggatttaagatcgagtga</cdnaseq>

Protein Sequence

<aaseq>MSAPPLLKAPAAAAASLVAAAAAHRATAAAAAPSGASRVPPRRL RCSASGAAAVEVRAPMDWATRSLEEMQRAEDFDSFCLMGLSPLDGRYERFTRDLKPFF SEFGLIRYRVIVEVKWLLKLSQIPEINEVPPFSKEAQLFLDAIIQDFSVADAKEVKKI EKTTNHDVKAVEYFLKQKCSSNPEIAKVLEFFHFGCTSEDINNLSHALALKEGVNTVM FPVMMDICKAMCSLATQNSTIPMLSRTHGQPASPTTLGKEMANFAARLSSIGNSFSEV KILGKFAGAVGNYNADVVAYPEVDWPKVAEDFVKSLGLEFNPYVTQIEPHDYISKLFN LFVQFNNVLTDFDRDMWTYISLGYFKQIVKAGEVGSSTMPHKVNPIDFENSDGNLTIA NGTLSSLSMKLPISRMQRDLTDSTVLRNLGVGLGHSLLAYKATLRGINKVQVNESRLS EDLDQTWEVLAEPIQTVMRRYGIPEPYEKLKEMTRGQAVTKDSIRQFIEDLDLPEAAR SSLLKLTPHSYIGEAEFLARNIEEVVDLKSGFKIE</aaseq>

Gene Sequence

<dnaseqindica>141..305#398..577#743..958#1040..1222#1360..1581#1781..1897#2029..2172#2545..2646#3109..3177#3630..3863#acgaatcatttcctatccatctcctccgccctcctttcttctccggccgcgcgccgcacggcccacctgcagccacccagcaaagccgccgcgcgcgtccttctcgctctagggttttcccacacgacaaccccccaagcatgtcggcgccgccgttgctgaaggctccggccgccgccgccgcctccctcgtcgcggcggccgcggcccaccgcgctacggccgccgccgccgccccgtccggtgcgtcccgcgtcccgccgcgacgcttgcgctgctctgcatcaggcgccgccgccgtcgaggtgagcagagactcttcccgtgcaaactctgaactcccgcttgagtagttgtcgttccttacgggggggggggggggggtctgtttggttaggtgcgtgctccgatggattgggcgacgaggtcgctggaggagatgcagcgggcagaggacttcgactctttctgcctgatggggctttcgccgctggatgggcggtacgagcgctttaccagggacctgaaacccttcttcagtgagttcggcctcatcagataccgggtcatcgttgaggtatcatttatttggattcctttgcactcgtatcatttgtagtgtatttcatcatttcctcacataaactaggatgcttgattcatgtgttaaatacagaaactggggcatgatgctagtgttataatcaatgttgcttatctgaagtgacttctggctctgtaggtaaagtggctactgaaactctcccaaatccctgagatcaatgaggtgcctccattcagcaaggaggcccagttattcctggatgcgattatccaggatttcagtgttgctgatgcaaaagaagtgaaaaagattgagaaaacaaccaaccatgatgtgaaggctgttgagtactttctcaagcaaaaatgcagctcaaatccagagattgcaaaggtatgtcagccttctgtgtgaaccaatacctgaacatactattacttcgttgctagctgttgagtgtatctttgtccccaggtgttggagttcttccattttggatgtacttctgaagatatcaacaacttgtcacatgcattagctctaaaagagggggtaaatacagttatgttccctgttatgatggacatatgcaaagcaatgtgctccttggcaacacaaaattcaaccatccctatgctgtcgcgaactcatggacaggtacgagaaccacctctgaagtatactcagtaatatatgcttgtactgtcgtacatatgtacacagagtcactgtaatcgatgctatatgcttagaagttataacgctagcttagatttccactttcctgcttgtagccagcatcgccaacaactctgggaaaagagatggcgaattttgcggccagattgtcaagcataggaaatagtttttctgaggtcaagatactagggaaattcgctggagctgtcggaaattacaacgctgatgttgttgcatatccagaagttgactggcctaaggttgcagaagattttgtcaaatcgttgggcttggagttcaatccttatgttacccaggtggtttatattcattattttgatatccagttgtttcatttgtattcccagttcagtgctttattggagttattattcttgaactatggtggtgtggagaatttcctattaatacactttccatttatctaactgcgctgtaaattctaaagtcatatgatactctttggtctgacgcagttttaacttttttttacagattgagccacatgactatatctcgaagctcttcaatctatttgttcagtttaacaatgtcttgactgatttcgatagagacatgtggacctatatatcactaggctacttcaagcaggtaatactaacatgcaaggactgttctttaaggtttggttgaattcgtttagtacatagtgggaaaaacttagtggtctacagttttagattctgtttgaacttactgcatccttccaaatgttgttccagatagtaaaggctggtgaagttggatcttccacaatgcctcacaaagtcaatcccattgatttcgaaaatagtgacggcaatttgactatagccaatggtacattgtcttctttaagcatgaagctaccaatttctcggatgcaggtataatactgtctgtactcttcaatttccacttttactatctccagttgtgaaaaaggggtagtacatcatccattgttgatgcacatgcaagaacagacgcctaacttgccacaaatggtgttcttaagtttggctttattaggctatagtccatggatttctgtcgaactcgtggcacacgctacactttcttacctctgcacaatttaatgctttcttacctcatttttcaatgcaaccgcaattttggtcaaccaatgtgcatgcaaaaattgtagcttgccactgatgtaaaatacagcaagcagtcagacatgcctaactatttacttaagattgaactaatgagcaaccatgtctctctgtcagcgtgatctcacagactcgactgttttgagaaatttgggtgttggattagggcattcactcttggcttacaaagctacattgcgaggaatcaataaggttcaggtaggtggccacaatcctcctcttgtttgatttggttgtttcttgaattattcttgtatagataattttatcattgtccaagtattgaactagcatattttgtatttgaagtctttctatgcatgctgtgatgctgaatggttgatgcccaagcatgcacatccacccacccacactttatgtttttggactaagtgaactataaagtgatggatgtggctaggtcttaccccaactattatttgtatctactcaatatgcacaggaaggacctcagtcagggtatctgtcgtactagaaacaagatattcctttgtgcactacacataatttcattttcggactattggaattttagacatttagtctgttttgtaattgaccttaactttgttaagtttactagccaaaatgtaactatgacacttcgttgtatttatgctgaattttgcctgttgttaggtgaatgaatcccggttatctgaagacttggatcaaacatgggaggtccttgcagagccaatacagacagtaagaccattctttttgtcctctatatggtttctggttgttttcacaatggtatgcttccatggaggagttgtattggtttgtcctagaaatttgtgcgcctcttcagatgctttcaaattgtcgaaagtgtcttttggatgcttgttttgtgattttgcattgcccttaatgctttgttaggtaggatttttacgtttttagccaggtgtattcatggtgaattttgatactgagaatggttagtttaattgcttttgtttggttcgaaaacgacatattctcctacatcgtacaatattttgaaaatttctcagaacttataagtttgatattgggggtaatttcacctattggcattttcaccagatacatcaactgtattcatcatcatttgtctgtcgtctttcaagctcagatgcatatcatacattattatatcatctttgtaggtgatgcgaaggtatggaatccctgaaccttatgagaagctgaaggaaatgaccagagggcaggctgtcaccaaggacagcatacggcaattcattgaagatctagacttgccagaggcggcacgatcgtcgcttctgaagctaacaccacattcttatatcggagaggcagaatttttggctagaaatatcgaagaggtggttgatctaaaatctggatttaagatcgagtgagcacccgttccggaactcggtaatccccccaaattttttaccaggacaggaagaataacgggcgaaaatcttcaaagctgagggtgaacaccgaattgtgtcctgacctttaacaacttccggttacgctaattcagctgtgctgattgaaaggcttttggatgcacgcaaaatgcatccgtggaatttgtgccatgcgtgtttcggaataaaatcagaagcaggataaatcttgctcgcctgtctttttcaatcgcaagtggccttgctacagtcttcattaatgcagcattcgcctttgcatcgagcaggctacg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0313600, RefSeq:Os03g0313600