Os03g0315800

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Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0315800| Description = Similar to 30S ribosomal protein S1, chloroplast precursor (CS1)| Version = NM_001056473.1 GI:115452674 GeneID:433265...")
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Gene Name

Os03g0315800

Description

Similar to 30S ribosomal protein S1, chloroplast precursor (CS1)

Version

NM_001056473.1 GI:115452674 GeneID:4332652

Length

4219 bp

Definition

Oryza sativa Japonica Group Os03g0315800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11402165..11406383

Sequence Coding Region

11402365..11402460,11402577..11402663,11402747..11402857,11402944..11403225,11403444..11403524
,11404096..11404371,11406052..11406229,11406279..11406340

Expression

GEO Profiles:Os03g0315800

Genome Context

<gbrowseImage1> name=NC_008396:11402165..11406383 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11402165..11406383 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccgagagcgcgaatggcgtccctggcgcagcacgtcgcggggctggcgagcccgccgctctggtgtgcgggacgtacgcgctcaccaaggaggagcgggagcgggagcggatgtgccagctgttcgacgaggcctccgagcgctgccgcaccgcgcccatggagggcgtctccttctcgcccgaggacctcgactccgccgtcgagtccaccgacatcgacaccgatatcggctcactcattaaaggaacagtgttcatgaccacttcaaatggtgcatatgttgatatccaatcgaagtctactgctttcttgcctttggatgaggcatgccttctcgatgtcaaccatatagaagaggcagggatccgtgcaggtttggtagaagagttcatgattattgacgagaatcctggtgatgaaactttgattttgagcttacaagcaattcagcaagaccttgcctgggaaaggtgcagacagcttcaagcagaagatgttgttgtcacgggtaaagtaattggtggaaacaaaggaggtgtggtagctcttgtggagggccttaagggatttgttccattttcacaagtgtcatcgaaatcaactgctgaagaactgcttgacaaagaactacctctgaagtttgtggaggtcgatgaggaacaaggcaggcttgtcctcagtaaccgcaaggcaatggcagatagtcaagctcagcttggtattggttcagttgtcttgggaactgtcgagagcctgaaaccttatggtgcatttatcgacattggtggaatcaatggccttctccatgtcagccagattagtcatgaccgtgttgcggacatctcgacagttctgcaaccaggagatacgctcaaggttatgattctaagccatgaccgtgaaagaggccgtgttagtctttctactaaaaagcttgagccgacacctggtgacatgattcgcaatccaaagcttgtttttgagaaggctgatgagatggctcagatattcaggcagaggatagctcaagcagaggcaatggctcgtgctgatatgttaagattccagcctgagagtggattaactctcagttcagagggcatcttagggccattatcatcagacacaccttctgagggctcgggagaagggcaaaccacagatgaatag</cdnaseq>

Protein Sequence

<aaseq>AESANGVPGAARRGAGEPAALVCGTYALTKEERERERMCQLFDE ASERCRTAPMEGVSFSPEDLDSAVESTDIDTDIGSLIKGTVFMTTSNGAYVDIQSKST AFLPLDEACLLDVNHIEEAGIRAGLVEEFMIIDENPGDETLILSLQAIQQDLAWERCR QLQAEDVVVTGKVIGGNKGGVVALVEGLKGFVPFSQVSSKSTAEELLDKELPLKFVEV DEEQGRLVLSNRKAMADSQAQLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISH DRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEM AQIFRQRIAQAEAMARADMLRFQPESGLTLSSEGILGPLSSDTPSEGSGEGQTTDE</aaseq>

Gene Sequence

<dnaseqindica>3924..4019#3721..3807#3527..3637#3159..3440#2860..2940#2013..2288#155..332#44..105#cccgaagcaccacaccacaaccacaacacaccacagcgggtaggccgagagcgcgaatggcgtccctggcgcagcacgtcgcggggctggcgagcccgccgctctccggcgcgccgcggcgccgccccgcggcgcccacgcggccgtcggcgctggtgtgcgggacgtacgcgctcaccaaggaggagcgggagcgggagcggatgtgccagctgttcgacgaggcctccgagcgctgccgcaccgcgcccatggagggcgtctccttctcgcccgaggacctcgactccgccgtcgagtccaccgacatcgacaccgatatcggctcactcgtaatccaccccccgcaaccttcctcctgttcttctcaatcgtccttgctcgctcgtatgatgtgaaacagatagtagcaattggtgcttaaaaacaggcttaactttcagtaggtgatgcctcgttttcctgcaagtcacttgagtcttaccttgtgctcaattggatacggcttgcgggagattggagtcacttgccctgtatatgtcactagttgttacatttcggtttgctagttgttttaggctatcaacaacaaggtgattggttactgaaagttacccaactagaattctattgtttgcttgcttggaatgtgctctgcgcatcatgattcgtctataatgtgttactcccctaaggtacaagcgaaagaatgttcagtttactacaagtacctcttccattttctgacctgctcatagtggtagcaggtatagtgataatcaggaatagtagtttcattagcccttacctgttatgttttgccttttgtgaaactagttgaacgctagaactcacgcaattgtgtggcttcatctaaataatttagttgttttttcaataatgtttactaaaaaaatatatatgtaggtctgatacttcaaataagagcaatacatggccatatcatattcctctataggctggagatttatacgatagctatgtattcagtgtaagctagagtagttcatattaatttgatgtactttaaattaagcttgacttttgattcaattctggtgaattagacttgaacggcgaattcccttttttacctccttggggatgataccttattggaggcttggagcaagagtttgatctaccaaaagcgtgtggtttttatttgtgtttgctacatcctctctttgattgcttccgcacgtgtaccaagttatacgaacatcatacatatgcctacctcaccctcatggcctcacaccggtcaccaatccatcagggcatagatatttctttgaagcatgaatatgcataaggtccaaagcacatgtaggatgttcatgtacatgtaatttccatcaaaaaggggtttccccttcaaaagatagaaatgtccttgaaatgtcatacaggtggggtctgtttttcttctttatatagttattttctccttttttttaaaaaaaaaacaaagccaaattcacattaaatgatagttaaagtaagctggagttgatccattgatccattccctgtagtaactagctgaccatggtaaccccaaactcgatgagatttcagttactgaccgattgctgcttgtcttgactgtaattatttatgtctatttaaataagaattgcttactatttatcaaccaatattatactcaataatcagctatacatctcttatacgttacaaatgcacatggacacaaaaactcattttgtccagctgccagatttgcattgatccttagaattttgctctgttagcaatgattctgctgttagtatctccttttgggcatgcagtactgttatctttgctgcaatattttgtgctatgttggtattataagatactgttcatattgcaaattttgtatagtttctcatatattgtattattctatcctttttttttgaaacgatgtattactctatccttaacatctaaaaactatcatgttcttgcaatctctacagattaaaggaacagtgttcatgaccacttcaaatggtgcatatgttgatatccaatcgaagtctactgctttcttgcctttggatgaggcatgccttctcgatgtcaaccatatagaagaggcagggatccgtgcaggtttggtagaagagttcatgattattgacgagaatcctggtgatgaaactttgattttgagcttacaagcaattcagcaagaccttgcctgggaaaggtgcagacagcttcaagcagaagatgttgttgtcacgggtaaagtgagtaaaaatacttgcagaaggaaatatttctgtgctattactattgttcttcactactcctttaatagcttgctgttgttaaacttgtaaccaaatgtttgttaagcactacttcttcttgcccaccgtttcggttctaacaatcaggctttgtccttgaatctatccctcacagcagcagccattgtcctttaatgaaaagaaattattcaagtggtaatttatggtgtacatactttatgacatccaacccatgatttcataatttctatatttgtgctgctgtttacttggtagagcttactgatcaggtactgagatcgtctatagatgcgacaatgaccagaaattttttgtttttattggactattgtgattttgttggtttgttcctgtgcaactagcaatgaactcctgaagtctagaccagtcactttgtaacaacatatcaaaaaatccttttgcaagagcttatatgattgtatgcttagttttattgggatgaatttgctgtaatgtattagtctgcggttacctgacttgttcatttggcaatgttgccccgcaggtaattggtggaaacaaaggaggtgtggtagctcttgtggagggccttaagggatttgttccattttcacaagtgtcatcggttggttctcaatcttattagttactacaaaactttcttgcatcctatggttttaggtgtatgtgcatgtgcatggcatgagctgcctttcatctgcaggtcaaagttgttatgcagataactgaacatttgatcctagtttccaatgcttagttctcaatcacattgtaaacactagctgcccactattttacaaaccacttcttgaccttgatcagaaatcaactgctgaagaactgcttgacaaagaactacctctgaagtttgtggaggtcgatgaggaacaaggcaggcttgtcctcagtaaccgcaaggcaatggcagatagtcaagctcagcttggtattggttcagttgtcttgggaactgtcgagagcctgaaaccttatggtgcatttatcgacattggtggaatcaatggccttctccatgtcagccagattagtcatgaccgtgttgcggacatctcgacagttctgcaaccaggagatacgctcaaggtattttttgcattcgtacttgagaaaagtatactatctaaagtttatagagctaaggccagagtattttttttaaatgctattaggttatgattctaagccatgaccgtgaaagaggccgtgttagtctttctactaaaaagcttgagccgacacctggtgacatgattcgcaatccaaagcttgtttttgagaaggtaagtttgaaagcaatattccttgatctggtccatctggaatgtatacaaactgacatactgttttctctgtctcaaaacaggctgatgagatggctcagatattcaggcagaggatagctcaagcagaggcaatggctcgtgctgatatgttaagattccagcctgaggtactgccatcatcattttattgaggctgcaaaatgaaatttatctgacattattcataagccactgcagtaacatttggctgaattaaattgtttctccctgtatctcttcacagagtggattaactctcagttcagagggcatcttagggccattatcatcagacacaccttctgagggctcgggagaagggcaaaccacagatgaatagcttcaataggaagattacgtctgagtagaaagctgtgatggtagctcatcaactcattttcccacgatctaaaaggcatgaagaagacctattgtattccaaccatttcccatcttcgatctgtgcttgtatcaatcaatgtgtatgaaagtaaagttactgaaagaaatggatgttgcttccctgttgtaaagttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0315800, RefSeq:Os03g0315800