Os03g0317100

From RiceWiki
Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0317100| Description = Protein prenyltransferase domain containing protein| Version = NM_001186470.1 GI:297722070 GeneID:9272128| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0317100

Description

Protein prenyltransferase domain containing protein

Version

NM_001186470.1 GI:297722070 GeneID:9272128

Length

3599 bp

Definition

Oryza sativa Japonica Group Os03g0317100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11463378..11466976

Sequence Coding Region

11463406..11465526

Expression

GEO Profiles:Os03g0317100

Genome Context

<gbrowseImage1> name=NC_008396:11463378..11466976 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11463378..11466976 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtctcccgcccgtccgcttcctgccgtcgagcgcggcgccggcggtggtggcggcgaacgcgcgcatagcccacctcgcccgggcggggaacatcgagggcgcgagggcggccttcgaggccatgcccctccgcaccaccgcctcctacaacgccctcctcgccggctacttccgcaaccgcctgccggacgcggccctcggcctcttccgccgcatgccctcccgcgacctcgcctcctacaacgccctcatatccggcctctcgctccgccgccagacgctcccggacgccgccgccgcgctcgcctccatccccttcccgccctccgtcgtctccttcacctccctcctccgtgggtacgtgcgccacggcctcctcgccgacgccatccgcttgttccagcagatgccggagcggaaccacgtctcttacaccgtgctgctcggtggactccttgatgccggccgtgtcaacgaggctcgcaggctgttcgacgaaatgcctgacagggatgtcgtggcgtggacagccatgctgtctgggtactgccaggctggtcggatcactgaggcacgcgctctgtttgatgaaatgccgaagaggaatgtcgtgtcatggaccgcgatgatctccggatatgctcaaaacggtgaggtgaaccttgcaaggaagctgttcgaggtgatgcctgagcgcaatgaggtctcgtggactgcaatgttggttgggtacatacaagctggccatgttgaggatgctgcagagctgtttaatgcaatgccggaacatccagtggccgcctgcaatgccatgatggttgggtttgggcaacgtggaatggtggatgctgccaagacagtgttcgagaaaatgtgtgagagagatgatgggacatggagtgccatgattaaagcgtatgagcagaacgaattcttgatggaggcactatctaccttccgtgagatgttgtggagaggtgtccgtccaaactacccatcagtcatcagcatactcacagtgtgtgcggcactggctgttcttgattatgggagggaggtgcatgctgcaatgctgagatgctcctttgacatggacgtctttgctgtgtcagcattaatcacaatgtatataaaatgtggaaatctggataaggccaagagggtctttcacacgtttgagccaaaagatattgtgatgtggaactccatgatcactggttatgctcaacatggattgggggagcaagcacttggcatatttcatgatatgaggttggcaggaatgtcgcctgatggaattacttatataggggccctcacagcttgtagctataccggtaaagttaaagaagggagggagatttttaattctatgactgtgaattcttccatccgacctggagctgagcattattcttgtatggttgatttacttggtcgatcaggccttgtggaggaagcatttgacttgataaagaatatgccagttgaaccagatgctgtcatctggggagctctgatgggtgcctgtaggatgcacaggaatgctgagattgctgagtttgctgctaagaagctattagagctagagcctgggaatgctggaccgtatgtcttactctctcacatttatacatccgttgggaggtgggaagatgcttctaagatgcggaaattcattagctcaaggaatttgaacaagtcaccaggctgtagttggatagagtacgacaagagggtgcatcttttcacatctggtgatgtattagcacatccagaacatgccgctattcttaggatattggaaaaactagatgggctattgatggagtctggttactcggctgatggaagctttgtgcttcatgatatagatgaggagcaaaagtctcatagcttgcggtatcatagtgagagacaggctgtggcatatggactactgaaaatcccagaaggaatgcccattcgtgtcatgaaaaacctcagggtttgtggtgactgccattctgcaataaagttgattgcaaagatcacttctagggaaatcatactaagagatgccaatagattccatcatttcaaagatgggttttgctcatgcagggactactggtga</cdnaseq>

Protein Sequence

<aaseq>MRLPPVRFLPSSAAPAVVAANARIAHLARAGNIEGARAAFEAMP LRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAA LASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVN EARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN GEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVG FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYP SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFH TFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKV KEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGAL MGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRN LNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLH DIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSR EIILRDANRFHHFKDGFCSCRDYW</aaseq>

Gene Sequence

<dnaseqindica>29..2149#tccccaaatttctcttccgccaaccgccatgcgtctcccgcccgtccgcttcctgccgtcgagcgcggcgccggcggtggtggcggcgaacgcgcgcatagcccacctcgcccgggcggggaacatcgagggcgcgagggcggccttcgaggccatgcccctccgcaccaccgcctcctacaacgccctcctcgccggctacttccgcaaccgcctgccggacgcggccctcggcctcttccgccgcatgccctcccgcgacctcgcctcctacaacgccctcatatccggcctctcgctccgccgccagacgctcccggacgccgccgccgcgctcgcctccatccccttcccgccctccgtcgtctccttcacctccctcctccgtgggtacgtgcgccacggcctcctcgccgacgccatccgcttgttccagcagatgccggagcggaaccacgtctcttacaccgtgctgctcggtggactccttgatgccggccgtgtcaacgaggctcgcaggctgttcgacgaaatgcctgacagggatgtcgtggcgtggacagccatgctgtctgggtactgccaggctggtcggatcactgaggcacgcgctctgtttgatgaaatgccgaagaggaatgtcgtgtcatggaccgcgatgatctccggatatgctcaaaacggtgaggtgaaccttgcaaggaagctgttcgaggtgatgcctgagcgcaatgaggtctcgtggactgcaatgttggttgggtacatacaagctggccatgttgaggatgctgcagagctgtttaatgcaatgccggaacatccagtggccgcctgcaatgccatgatggttgggtttgggcaacgtggaatggtggatgctgccaagacagtgttcgagaaaatgtgtgagagagatgatgggacatggagtgccatgattaaagcgtatgagcagaacgaattcttgatggaggcactatctaccttccgtgagatgttgtggagaggtgtccgtccaaactacccatcagtcatcagcatactcacagtgtgtgcggcactggctgttcttgattatgggagggaggtgcatgctgcaatgctgagatgctcctttgacatggacgtctttgctgtgtcagcattaatcacaatgtatataaaatgtggaaatctggataaggccaagagggtctttcacacgtttgagccaaaagatattgtgatgtggaactccatgatcactggttatgctcaacatggattgggggagcaagcacttggcatatttcatgatatgaggttggcaggaatgtcgcctgatggaattacttatataggggccctcacagcttgtagctataccggtaaagttaaagaagggagggagatttttaattctatgactgtgaattcttccatccgacctggagctgagcattattcttgtatggttgatttacttggtcgatcaggccttgtggaggaagcatttgacttgataaagaatatgccagttgaaccagatgctgtcatctggggagctctgatgggtgcctgtaggatgcacaggaatgctgagattgctgagtttgctgctaagaagctattagagctagagcctgggaatgctggaccgtatgtcttactctctcacatttatacatccgttgggaggtgggaagatgcttctaagatgcggaaattcattagctcaaggaatttgaacaagtcaccaggctgtagttggatagagtacgacaagagggtgcatcttttcacatctggtgatgtattagcacatccagaacatgccgctattcttaggatattggaaaaactagatgggctattgatggagtctggttactcggctgatggaagctttgtgcttcatgatatagatgaggagcaaaagtctcatagcttgcggtatcatagtgagagacaggctgtggcatatggactactgaaaatcccagaaggaatgcccattcgtgtcatgaaaaacctcagggtttgtggtgactgccattctgcaataaagttgattgcaaagatcacttctagggaaatcatactaagagatgccaatagattccatcatttcaaagatgggttttgctcatgcagggactactggtgaggtgaatagtctggtcttttcctttctcagcaccttccctttagtgatccttccatttggtgagtcttctatcaaggaccttggtttctcaaattatcttgtttgttgacccttctaattttttgtgtctcagtagctgagaacagagatccttggtttctcaaataaaactgtcaactatgaacacattatattaatttcattattacagctcttttctatatctaatttaataatatctggttttaaaacttattcaggatccaggtttcaaaacgtccatttgaccgtgaagtacaccatccgttgcaggctaactgcatctggtcaattgtcctgtcgaggtatgctgaaccattcacagtgtaatgcagggtgctgctctaagggcctgtttggtagggttctaactccaaaatttaacttcaggagttgggtttggagtggagttgtgaagctgtctaaatccagctgcacctctttagttcattttgtgagagcacttcagccagctccacccgaagctccactaccttttcgggtggagctgaaaccgtttgattgggctccagctccaggagaggtggagctagagccaaagctgtgccaaacagaccctaagtaacatcacatcttagaaatcagagttaagcacttacgctgaactagaatatgggtaagtatgttatcctcagataaaacacagatgcaaatcatttccttgtacatgtttcattgactttcaaaagtagcattttatattttgaattgttaaatcctccaaagaaagctgcaaggtaaaaattacttcatacttcctccttcccaaatgtcgcaacctaggaccggatttgacacaacctagcacaacaaatctggacagaccaaatccggtcttaggttgatatattttggatggtggtagtatgttatttactcaccccatttatgtgtatatgttggcatttcacattgaactatcatttttgcagatacatgatccactactcggcacttcagcctaaacactctatatattgtgtttaatttggtggagctaaactttgggatagttgtagcatgaaaaacaagcaaatttctgtggtggttcatcaggcaggctttctgatcataaattttcttgtgaatattgagttcagaagatatccatctaatttttggaacaatcctgtggatgatttgattggttatcaacgattcaagaatcagcataaggcaggctttctgatcataaattttcttgtgactgagttcagaagatatccatctaatttttggaacaatcctgtggatgatttgattggttatcttatctacgattaaagatttagcagtaaacagttgaccaacagcggatccaggtaaacctagcagcgttctgccaaaaatggaattgtattactttctaggataaaatactagaattatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0317100, RefSeq:Os03g0317100