Os03g0317200

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Gene Name

Os03g0317200

Description

Zinc finger, SWIM-type domain containing protein

Version

NM_001186471.1 GI:297722072 GeneID:9268008

Length

2649 bp

Definition

Oryza sativa Japonica Group Os03g0317200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11468842..11471490

Sequence Coding Region

11468842..11469451,11469674..11469881,11469945..11471490

Expression

GEO Profiles:Os03g0317200

Genome Context

<gbrowseImage1> name=NC_008396:11468842..11471490 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11468842..11471490 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgttctgaactttttggttgtacggttccactataatggagagttcatatacgatggtaggcaaaagcattattgtggtggatctgaagcaatatcacacattgaccgtgacaaagtttcgttgccagaggttaagggccatctaaaggaccattgtgcagttgagaaaccaatgcttttgcattggttgttcccaatgaaagagctgaaggatggtcttcgtgttttgttggacgacaaggtttgccaactgatgtcagactgtactagtgaagcagaggttgcagatatatatgttgatacacaagttgcacaagaagacaattcagatgcagaagatgtaggaagtgataatgacagtgattttgaagatgaaattgaagaaatttcttcagatgaggaggctgttgaaatttttgaagtggatactaaagggaagaagcctgttatgatagtaacatcaataccagataagactcagggacaaattgagtcactgagacagtgtcataatcttgctaagaaggacaagaaagaggcacaagtggtagcacaaagtgatcagttggttccttatagtgctgaaagtgattctgattctgatagtgattatttaggtggggacagctgctcttcagaggaggatgaggaagcaaatgagatcatgaaatcatttaaggagtttcagaagaagctaaaggatggtcaagttgctgatctcgatgatgtgttttgtggagaaagagctagtcagaggagtgagaaagcacaagtacagattgaggatgatggaaatgcaacaccttatgatgacagtagtgcagatgattcatttgaagaggatagtgatggtcagttgatcactaaaaggagtaagtatctaaggttcagaggtagtagtagcagcactccgacttttactctaggccagttatttgattgtaagaaagagttcaaggatgcagttataaaacatgcactagccaacagaaggtatgtggagtttgtaaaggatgagggtgatagagtcagagcaaaatgtgagtggaaattgtatccttgggtctgtcttctcaaaaagacaagtaggaccaatagttggcaaatcacaagctttactgatggacacatatgccctcagaggaaagataatccaatggtaacatcaataagaattgcagagaagtatgagaagatgattagagataacccaacatggagtatcaagaatatgatttctactgtttctgaagaaatgtttgcaaatgtcagtgttcctcagtgtaaaagagcaaaggcacatgttctaaagaaactttatgatgcaacaaggtgtgagtattcaaggatatttgactaccaacttgagctactaagaagtaacccaggcagtacagtagtagtcactcttgatagtgatagtccaactcatgtgttccaaagaatctacgtatgccttaatacttgtaagaaaggattccttgctggttgtagaagagttgttggactagatggttgttttttcaagagatcaaccaatgtagtggagaaagagaccaatgactcatgggactggttttgtgctttgctattcaaagatcttgttgctggtgatggtgatggttgggtggtcatatcagatcaacaaaagggaattattaatgctattgaaacctggatacctaaagctgagcatagaaattgtgctaggcacatttacgccaattggaggaagaagttcaagaataggtttctgcctataatcagtatgcttgaagctattagaagaaaagttatggttaggatacatgagcataggaccaaaatggagaagtggataggaccaatctgtccaaacatacttaagaaactcaatgcttatgttacagaatctggattttgccatgcaatttcaaatggaaatgacaaatttgaagtgaaacatcatgaacaaaggttcacagtcaaccttcaaagcagaacttgctcttgtagatattggcagttagcagggctctcttgctgtcatgctattgcttgcatccactacaaaaccaatagccttgatgattatattgcctcctgctactcagtgaaagcattcatgtcaacatatgaacattgccttgagcctatggaaggcattcatatctggccaatatctaagagatccaagcctgttgcacctccctatgttaaaatgccaggtagaccaaagaaggagaggagaagggagccacatgaaaaacccaaagcaaccagggtgtcaaaagtgggcactatcattaggtgtagaagatgcaagggaattggacacaacaagacaacttgtgcaaagagaaatgcaagcactgcttag</cdnaseq>

Protein Sequence

<aaseq>MDVLNFLVVRFHYNGEFIYDGRQKHYCGGSEAISHIDRDKVSLP EVKGHLKDHCAVEKPMLLHWLFPMKELKDGLRVLLDDKVCQLMSDCTSEAEVADIYVD TQVAQEDNSDAEDVGSDNDSDFEDEIEEISSDEEAVEIFEVDTKGKKPVMIVTSIPDK TQGQIESLRQCHNLAKKDKKEAQVVAQSDQLVPYSAESDSDSDSDYLGGDSCSSEEDE EANEIMKSFKEFQKKLKDGQVADLDDVFCGERASQRSEKAQVQIEDDGNATPYDDSSA DDSFEEDSDGQLITKRSKYLRFRGSSSSTPTFTLGQLFDCKKEFKDAVIKHALANRRY VEFVKDEGDRVRAKCEWKLYPWVCLLKKTSRTNSWQITSFTDGHICPQRKDNPMVTSI RIAEKYEKMIRDNPTWSIKNMISTVSEEMFANVSVPQCKRAKAHVLKKLYDATRCEYS RIFDYQLELLRSNPGSTVVVTLDSDSPTHVFQRIYVCLNTCKKGFLAGCRRVVGLDGC FFKRSTNVVEKETNDSWDWFCALLFKDLVAGDGDGWVVISDQQKGIINAIETWIPKAE HRNCARHIYANWRKKFKNRFLPIISMLEAIRRKVMVRIHEHRTKMEKWIGPICPNILK KLNAYVTESGFCHAISNGNDKFEVKHHEQRFTVNLQSRTCSCRYWQLAGLSCCHAIAC IHYKTNSLDDYIASCYSVKAFMSTYEHCLEPMEGIHIWPISKRSKPVAPPYVKMPGRP KKERRREPHEKPKATRVSKVGTIIRCRRCKGIGHNKTTCAKRNASTA</aaseq>

Gene Sequence

<dnaseqindica>2040..2649#1610..1817#1..1546#atggatgttctgaactttttggttgtacggttccactataatggagagttcatatacgatggtaggcaaaagcattattgtggtggatctgaagcaatatcacacattgaccgtgacaaagtttcgttgccagaggttaagggccatctaaaggaccattgtgcagttgagaaaccaatgcttttgcattggttgttcccaatgaaagagctgaaggatggtcttcgtgttttgttggacgacaaggtttgccaactgatgtcagactgtactagtgaagcagaggttgcagatatatatgttgatacacaagttgcacaagaagacaattcagatgcagaagatgtaggaagtgataatgacagtgattttgaagatgaaattgaagaaatttcttcagatgaggaggctgttgaaatttttgaagtggatactaaagggaagaagcctgttatgatagtaacatcaataccagataagactcagggacaaattgagtcactgagacagtgtcataatcttgctaagaaggacaagaaagaggcacaagtggtagcacaaagtgatcagttggttccttatagtgctgaaagtgattctgattctgatagtgattatttaggtggggacagctgctcttcagaggaggatgaggaagcaaatgagatcatgaaatcatttaaggagtttcagaagaagctaaaggatggtcaagttgctgatctcgatgatgtgttttgtggagaaagagctagtcagaggagtgagaaagcacaagtacagattgaggatgatggaaatgcaacaccttatgatgacagtagtgcagatgattcatttgaagaggatagtgatggtcagttgatcactaaaaggagtaagtatctaaggttcagaggtagtagtagcagcactccgacttttactctaggccagttatttgattgtaagaaagagttcaaggatgcagttataaaacatgcactagccaacagaaggtatgtggagtttgtaaaggatgagggtgatagagtcagagcaaaatgtgagtggaaattgtatccttgggtctgtcttctcaaaaagacaagtaggaccaatagttggcaaatcacaagctttactgatggacacatatgccctcagaggaaagataatccaatggtaacatcaataagaattgcagagaagtatgagaagatgattagagataacccaacatggagtatcaagaatatgatttctactgtttctgaagaaatgtttgcaaatgtcagtgttcctcagtgtaaaagagcaaaggcacatgttctaaagaaactttatgatgcaacaaggtgtgagtattcaaggatatttgactaccaacttgagctactaagaagtaacccaggcagtacagtagtagtcactcttgatagtgatagtccaactcatgtgttccaaagaatctacgtatgccttaatacttgtaagaaaggattccttgctggttgtagaagagttgttggactagatggttgttttttcaagagatcaaccaatggtgagttactatgttcattagggagggatgcaaataactagatgtacccaattgcttgggcagtagtggagaaagagaccaatgactcatgggactggttttgtgctttgctattcaaagatcttgttgctggtgatggtgatggttgggtggtcatatcagatcaacaaaagggaattattaatgctattgaaacctggatacctaaagctgagcatagaaattgtgctaggcacatttacgccaattggaggaagaagttcaagaataggtaatggcaaaaaaaaattttggaggtgtgccaaagctccatgtaggcctctgtttatgttagcaaaagcaaagctagcacaatgcacaagggaaggagccgaggctatcatgaaaactgatcctcaccactggagctgggcatggttcaagttagatcaaattatgactcggttgacaacaatatgtgtgaatccttcaacaaatggattgttgaggctaggtttctgcctataatcagtatgcttgaagctattagaagaaaagttatggttaggatacatgagcataggaccaaaatggagaagtggataggaccaatctgtccaaacatacttaagaaactcaatgcttatgttacagaatctggattttgccatgcaatttcaaatggaaatgacaaatttgaagtgaaacatcatgaacaaaggttcacagtcaaccttcaaagcagaacttgctcttgtagatattggcagttagcagggctctcttgctgtcatgctattgcttgcatccactacaaaaccaatagccttgatgattatattgcctcctgctactcagtgaaagcattcatgtcaacatatgaacattgccttgagcctatggaaggcattcatatctggccaatatctaagagatccaagcctgttgcacctccctatgttaaaatgccaggtagaccaaagaaggagaggagaagggagccacatgaaaaacccaaagcaaccagggtgtcaaaagtgggcactatcattaggtgtagaagatgcaagggaattggacacaacaagacaacttgtgcaaagagaaatgcaagcactgcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0317200, RefSeq:Os03g0317200

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