Os03g0317300

From RiceWiki
Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0317300| Description = Peptidase A1, pepsin family protein| Version = NM_001056477.1 GI:115452682 GeneID:4332657| Length = 1498 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0317300

Description

Peptidase A1, pepsin family protein

Version

NM_001056477.1 GI:115452682 GeneID:4332657

Length

1498 bp

Definition

Oryza sativa Japonica Group Os03g0317300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11472971..11474468

Sequence Coding Region

11473063..11474409

Expression

GEO Profiles:Os03g0317300

Genome Context

<gbrowseImage1> name=NC_008396:11472971..11474468 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11472971..11474468 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaagcttgagaagatgcttctcctactgtcgctgcttgcggtgatcgccgtcgttgctcgatgcgacgcggcggctctgaggctgcacgccacccacgccgacgccggccgcggcctcagcacgcgcgagcttctgcgccggatggccgcgcgcagcaaggcccgctcggcgcgcctgctctccgggcgcgcggcgagcgcccgcatggacccggggagctacaccgacggcgtcccggacacggagtacctggtgcacatggccatcggcacgccgccgcagccggtgcagctcatcctcgacaccggcagcgacctcacctggacacagtgcgcgccgtgcgtgtcctgcttccgccaaagcctcccacgcttcaacccgtcccgttccatgacgttctcggtgctgccctgcgacctgcgcatatgtcgcgacctgacctggtcttcctgtggcgagcagagctggggcaacggcatctgcgtctacgcctacgcctacgccgaccactccatcacaaccggtcatctcgactccgacaccttcagcttcgcgagcgccgatcatgccatcggtggcgcctctgtgccggacctaaccttcggctgcggcctctttaacaacgggattttcgtgtccaacgagaccggcatcgctggcttctcccgcggcgcgctgtccatgccggcgcagcttaaagtcgacaacttctcctactgtttcaccgctataacagggtcagaaccgagccccgtgttcctcggcgttccgccgaacctctacagcgacgccgccggcggtggccatggcgtcgtccagtccaccgctctcatccggtaccattcgtctcagctgaaagcgtactacatctccctcaagggcgtaaccgtgggcacgacgaggctgccgatcccggaatcggtgttcgccttgaaggaggatggcacgggcggcaccatcgtcgactccggcaccggcatgacgatgctgcccgaggccgtctacaacctcgtgtgcgacgcgttcgtggcccagacgaagctcactgtgcacaactcgacgtcgtcgttgtcccagctctgcttctcggtgccgccgggagccaagcccgacgtaccggcgctggtgctgcactttgagggcgcgacgctggacctgcctcgggagaactacatgtttgagatcgaggaggccgggggaataagactcacctgcctcgctatcaacgcaggggaggacctgagtgtcataggcaactttcagcagcagaacatgcacgttctctacgatctggccaacgacatgctgtcctttgtccctgcacgctgcaacaagatctag</cdnaseq>

Protein Sequence

<aaseq>MKKLEKMLLLLSLLAVIAVVARCDAAALRLHATHADAGRGLSTR ELLRRMAARSKARSARLLSGRAASARMDPGSYTDGVPDTEYLVHMAIGTPPQPVQLIL DTGSDLTWTQCAPCVSCFRQSLPRFNPSRSMTFSVLPCDLRICRDLTWSSCGEQSWGN GICVYAYAYADHSITTGHLDSDTFSFASADHAIGGASVPDLTFGCGLFNNGIFVSNET GIAGFSRGALSMPAQLKVDNFSYCFTAITGSEPSPVFLGVPPNLYSDAAGGGHGVVQS TALIRYHSSQLKAYYISLKGVTVGTTRLPIPESVFALKEDGTGGTIVDSGTGMTMLPE AVYNLVCDAFVAQTKLTVHNSTSSLSQLCFSVPPGAKPDVPALVLHFEGATLDLPREN YMFEIEEAGGIRLTCLAINAGEDLSVIGNFQQQNMHVLYDLANDMLSFVPARCNKI</aaseq>

Gene Sequence

<dnaseqindica>93..1439#acagtacatgtggacttctttctatcttgaattccatttcgtgaatatcaggcatacttcttgttttactacaggaatcgaagcaagtgaaaatgaagaagcttgagaagatgcttctcctactgtcgctgcttgcggtgatcgccgtcgttgctcgatgcgacgcggcggctctgaggctgcacgccacccacgccgacgccggccgcggcctcagcacgcgcgagcttctgcgccggatggccgcgcgcagcaaggcccgctcggcgcgcctgctctccgggcgcgcggcgagcgcccgcatggacccggggagctacaccgacggcgtcccggacacggagtacctggtgcacatggccatcggcacgccgccgcagccggtgcagctcatcctcgacaccggcagcgacctcacctggacacagtgcgcgccgtgcgtgtcctgcttccgccaaagcctcccacgcttcaacccgtcccgttccatgacgttctcggtgctgccctgcgacctgcgcatatgtcgcgacctgacctggtcttcctgtggcgagcagagctggggcaacggcatctgcgtctacgcctacgcctacgccgaccactccatcacaaccggtcatctcgactccgacaccttcagcttcgcgagcgccgatcatgccatcggtggcgcctctgtgccggacctaaccttcggctgcggcctctttaacaacgggattttcgtgtccaacgagaccggcatcgctggcttctcccgcggcgcgctgtccatgccggcgcagcttaaagtcgacaacttctcctactgtttcaccgctataacagggtcagaaccgagccccgtgttcctcggcgttccgccgaacctctacagcgacgccgccggcggtggccatggcgtcgtccagtccaccgctctcatccggtaccattcgtctcagctgaaagcgtactacatctccctcaagggcgtaaccgtgggcacgacgaggctgccgatcccggaatcggtgttcgccttgaaggaggatggcacgggcggcaccatcgtcgactccggcaccggcatgacgatgctgcccgaggccgtctacaacctcgtgtgcgacgcgttcgtggcccagacgaagctcactgtgcacaactcgacgtcgtcgttgtcccagctctgcttctcggtgccgccgggagccaagcccgacgtaccggcgctggtgctgcactttgagggcgcgacgctggacctgcctcgggagaactacatgtttgagatcgaggaggccgggggaataagactcacctgcctcgctatcaacgcaggggaggacctgagtgtcataggcaactttcagcagcagaacatgcacgttctctacgatctggccaacgacatgctgtcctttgtccctgcacgctgcaacaagatctagaattgcatcttcctgtaaacacatcgtcgtcgatgaaaattacgctgtcataaaagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0317300, RefSeq:Os03g0317300