Os03g0318500

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Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0318500| Description = Similar to Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD)| Version = NM_001056479.1 ...")
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Gene Name

Os03g0318500

Description

Similar to Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD)

Version

NM_001056479.1 GI:115452686 GeneID:4332659

Length

5930 bp

Definition

Oryza sativa Japonica Group Os03g0318500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11520466..11526395

Sequence Coding Region

11520611..11520851,11520925..11521125,11521448..11521647,11521730..11521850,11522371..11522411
,11522489..11522597,11522812..11523017,11523157..11523271,11523745..11523839
,11525054..11525310,11525555..11525774,11526248..11526331

Expression

GEO Profiles:Os03g0318500

Genome Context

<gbrowseImage1> name=NC_008396:11520466..11526395 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11520466..11526395 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggctcgcggtgtcggcttccccagctccggcgccggcgtccttccggccggcggcggcggcctcgcgcttcggcccgtgtgcacaggttgcaggacctgctgccaattttagaacacgagtttgtggactgagatgtttgatcgctgcaaagctgaagttccggaaggccttgaagaggcatggatggcagcttcgaaggaatctagaagtccgagccaatgataaagtgcctgattggttggaggctacaccactgactgagaatataatgtctcgggacgtacaactcgcgtatgattctggaggtgaaacatcaaatacatgccctgatactttggacagttcagtcattgagcaaagttcaatgcatcacaaacttaacccctctgaaacccatcctcctgtgctgaaggaagaccctgttctattcgacgacccacctgaaagcgcagcgcctctttgcattgctgtaattggagcaactggtgaactggcaaaaaataaagtgttccctgcactatttgctctgtattacagtggttttcttcctcagaatgtcggtatatttgggtattctaggaagacactaacggatgaagatttaagatccatgattgaagccaatttgacctgccgggttgaccaccacgaaaactgtgatgaaaagttaaatgaatttcttaaaaggacatactatatagatgcaggatatgacaacaaagatgggatggtgaaactaaattccaaaatgtcacagatagagggtaattgtgcagcaaacaggatattttaccttgctgttccccaagaggcacttcttgatgttgcactgtcactagctgacagtgcccaaactatgcaaggctggaataggataataattgagaaaccatttggcttcactggtttgtcttcacatcgggtaacacaatcactgctgtcaagatttgaggaggagcagatttacaggattgatcatcttttggggaaggatctgattgaaaatctcaccgtcttgagattttctaatttggtgtttgaacctttgtggagtcgcacctatatacgcaatgtacaggtcatattttctgaagaaacagcagcagaaatccaagggagatactttggaaattatggcataattcgtgacatagtgcatagtcacattcttcaaacaatagcactatttgcgatggaaccacctgtaagccttgatggagaggatatccgagatgaaaaggtgaaggtgctcagatcaattcgacaggtgaaccttgaggatgttgttcttggtcaactgaaagatacctctgtgaaagttgacagatatacaaaatcattgacaccaacctattttgctgctgccatgtacattgacaattcgcgttgggatggagtaccatttttgatcaagacaggaattgggctcatggaaaatagagctgagattcgtattcagtttcgccatgttcctggcaatatctatcgtgaacgctttggccatgacatagatcttgacacaaatgagctgatcttgcgtgatcaacctgaagaagccatccttttgaaagtcaacaataaggtcccaggacttgggctccagttagatgcttcagaactcaacctgctttacagggataggtacaatgtcgaactgccagattcgtatgagcatcttcttcttgatgtgcttgatggagacagtcatctattcatgcgcagtgatgaagtagctgctgcatggaacgtgctaactccactaatccatgagattgatcagaatagaatagctcctgagctctacgaggctgggggtagaggacccgttaatgcgtactaccttgctgctaaacatggggtcagattggatgatgaatggtga</cdnaseq>

Protein Sequence

<aaseq>MAGLAVSASPAPAPASFRPAAAASRFGPCAQVAGPAANFRTRVC GLRCLIAAKLKFRKALKRHGWQLRRNLEVRANDKVPDWLEATPLTENIMSRDVQLAYD SGGETSNTCPDTLDSSVIEQSSMHHKLNPSETHPPVLKEDPVLFDDPPESAAPLCIAV IGATGELAKNKVFPALFALYYSGFLPQNVGIFGYSRKTLTDEDLRSMIEANLTCRVDH HENCDEKLNEFLKRTYYIDAGYDNKDGMVKLNSKMSQIEGNCAANRIFYLAVPQEALL DVALSLADSAQTMQGWNRIIIEKPFGFTGLSSHRVTQSLLSRFEEEQIYRIDHLLGKD LIENLTVLRFSNLVFEPLWSRTYIRNVQVIFSEETAAEIQGRYFGNYGIIRDIVHSHI LQTIALFAMEPPVSLDGEDIRDEKVKVLRSIRQVNLEDVVLGQLKDTSVKVDRYTKSL TPTYFAAAMYIDNSRWDGVPFLIKTGIGLMENRAEIRIQFRHVPGNIYRERFGHDIDL DTNELILRDQPEEAILLKVNNKVPGLGLQLDASELNLLYRDRYNVELPDSYEHLLLDV LDGDSHLFMRSDEVAAAWNVLTPLIHEIDQNRIAPELYEAGGRGPVNAYYLAAKHGVR LDDEW</aaseq>

Gene Sequence

<dnaseqindica>5545..5785#5271..5471#4749..4948#4546..4666#3985..4025#3799..3907#3379..3584#3125..3239#2557..2651#1086..1342#622..841#65..148#gacacgatctttgcaccgggtgactcgggaaagggggaggcgagcggcagcagcacaggcaggaatggcggggctcgcggtgtcggcttccccagctccggcgccggcgtccttccggccggcggcggcggcctcgcgcttcggcccggtgagtccgcgtgagtctgcggttggtggcggcgcttgtacttctggcgccgccgatttctctcttccctccggcgctgtgcgcctagcctgttcgacgaaatgtgttatccgagtcgccgggcgaggatagccttgttactctcgggtacagggtacccatggctgttgcgattcgcctggtctctatggaccgagaggggtgaaatggaagggcgagagcttcaaactatcgaaattgcgtttggtgtttatgtttttgtagtaagcgcataaaccttcctccttccttgttctattggataagttagattacactacaggcatgcgaccgaggcagttctttttttttttcttttgactagttggtattgtggggagtggcaaattggcaataggatagagcttctttagctcacatctcatcattttgtatttggttctgatcaatttctgcttgatgcttctgtgcagtgtgcacaggttgcaggacctgctgccaattttagaacacgagtttgtggactgagatgtttgatcgctgcaaagctgaagttccggaaggccttgaagaggcatggatggcagcttcgaaggaatctagaagtccgagccaatgataaagtgcctgattggttggaggctacaccactgactgagaatataatgtctcgggacgtacaactcgcgtatggttggtattgggaaaaccaattctgttttgctaccaagcatgcactcaccgaatttctgtggctattggcctatcattcctttggtttcatggtatcggtttgtttcatactatgagtagagatgtaatttctacttgtattcacactatcttgctactatgtgccatcctataaaactgaacggtggacatctgcttgcatctatatgttttggcatacatcttattgtaccctgttatgcagattctggaggtgaaacatcaaatacatgccctgatactttggacagttcagtcattgagcaaagttcaatgcatcacaaacttaacccctctgaaacccatcctcctgtgctgaaggaagaccctgttctattcgacgacccacctgaaagcgcagcgcctctttgcattgctgtaattggagcaactggtgaactggcaaaaaataaagtgttccctgcactatttgctctgtattacagtggttttcttcctcaggtatggacatgtcatagcttttgctaccctcatttttatctgttttgataatacaaatgccatcatgttagtctgttaccccttttcttgatctagttagttatatgtaaaattgcaagtcttaatcatataggtgtaaagagaagtccagtatatcgtagtcttgtaccgacacacatgctagagtctgttttgacatatcaaacttgactgttaggaacaagggtaaaaggagcatttctcccaaatatatttgatgatttttggtagcaagcggaaagagttggttatcaattgtacaatagacctaccaacagatgaataaagacaagatgctcaacttgtttgttgaggatagataagaaatcaaaatttttccttcagtttgatatttgttggagctctatggaaaaaactaatttatttccactgtgatgttctcagtgtcctgtccagtaaatatcccaaaaggttcaaagactggttcgcatgtaaatgctagaattgaatgggctatgtttactcaaccatattttaacaactatctggcaacccatcatccaactttctgtccatgcatataggttttgatatatgaagtgtccttaaatacttttttttagaggctgtccttaaagacttccaggtattaacttagatgtggttaacttcttatccaactttcgatctatatacataggatatgatacatgaatgtatttaaaggatcaattatcgtcgcctaatatcaactggctgtcaagtatcttattcgcacacatggggtagtcttaatgcacatgatcctatgttcacaatccgcccagtgaatcttcattatctatttattgccagtccctcttttgccttactagttctatgcctgtgcattgcaacgggatctggagtaatatgggttgggaggggtaggcctgtttggttttttacgggattttctagcgtgcaggtgggaggggtgggtcggttcggtttttaaggggattcgttcacgctgtgcgtggtagggggaggtggacaactatgtctttaaagtagtagagatatggtaaagcccagcgccaaactgccaatagaaatgcattgatttgctcgtgaattgttaagtacctttgaacctttgaatttatcgcctctttgtcagcttctccatatggcctattgtcatatcacaacttctgaattttatattgcagaatgtcggtatatttgggtattctaggaagacactaacggatgaagatttaagatccatgattgaagccaatttgacctgccgggttgaccaccagtatgtctctttggtagcacccagttgtaatctaatatttcatctgtcatcactgttgaatagataaaatattggtgctgaattctgtatttctttttctagctctgaaattactatggttttctttcatgatgggagtgaaatcagataaataattgccatcacccaatttttaagttgccttgatttttcaaatatggtttatgctgggccccatccccatatgtatgcatgctttggtggtgttgggactagacagaatgttatttcaggcaaacaattttgtgcatcgcgctgatatattttgccccaaaacttttgaaagttctttcacagttttaattattagctattcctacaacaaacttaggcatactttatctgcccttaaaaatatctgatgccatctagctttccaaaactaagaggaatttatgctgacatatattctttttttttttgtggatatgcagcgaaaactgtgatgaaaagttaaatgaatttcttaaaaggacatactatatagatgcaggatatgacaacaaagatgggatggtgaaactaaattccaaaatgtcacagatagaggtaaatttcggattaaaaaactgttttatttatgtgagaccagatttaagctttatacttaaacgtagaattcctttagaaaaaaaaatcattttgtaagggcttacatggttcattaataggcctatttgtttcaaagggtaattgtgcagcaaacaggatattttaccttgctgttccccaagaggcacttcttgatgttgcactgtcactagctgacagtgcccaaactatgcaaggctggaataggataataattgagaaaccatttggcttcactggtttgtcttcacatcgggtaacacaatcactgctgtcaagatttgaggaggagcagatttacaggttatctctaatgtcatatatcttatttttcctactggctacttttatagtagtatttatttttggttaaaaaaataatttcattatttttgcctgcaactacaaaaaaaaatggtggtcctttttctgaacgaatgggttgtctcatcaattgtttttgaattgcaactctacatgtatccgactaaaacatgaaatgttatatatcccataggattgatcatcttttggggaaggatctgattgaaaatctcaccgtcttgagattttctaatttggtgtttgaacctttgtggagtcgcacctatatacgcaatgtacaggtaaattttacacacgctcaatttacaacgttttatcttgttgcatgtacattgttaacatgcccgaactgttacaggtcatattttctgaagaaacagcagcagaaatccaagggaggtgagtttaactctatccatttttttgagtatgttgttgaatgatatatttcttcctttccaccatttttggtataataaatgtgtttaataagtgtgtatttccatccctagccccaaaggtgatgggattgtttttttagcatcattcaataaaggaaaaagagcctctacgatttgatcctcatgtagcaaacaatgtgctctggcccatttcatgattaggcactaccttgtttcagattaaacaatccggatatgatggtgtcatgtttttagataatggaacaaaaatcccagcctctgcatcatatgtgatgcacacagccgggatatgctggtgttatgtaactgaaatcttaatgagttgttgatttccaaactgatgtgattacataccaatttttatcctagttgttactaaatctgtgcatgacaagctcattgctgtttcaaagaaattcacaatcatctcgtgattatcttagagctctaattttgcattgtcacatctattgcagatactttggaaattatggcataattcgtgacatagtgcatagtcacattcttcaaacaatagcactatttgcgatggaaccacctgtaagccttgatggagaggatatccgagatgaaaaggtaaaataactacaacttattaggggtgttaaccaagcagaactgctacagaattttaagaactacattgtgttgtatgtaggtgaaggtgctcagatcaattcgacaggtgaaccttgaggatgttgttcttggtcaactgaaagatacctctgtgaaagttgacagatatacaaaatcattgacaccaacctattttgctgctgccatgtacattgacaattcgcgttgggatggagtaccatttttgatcaagacaggaattgggctcatggaaaataggtactctctataagttctattagttgatgtatcactacactagttaatttctgattctggactcaaaattgtggtgttgtgttaatacgaaaattgttttcatacctttagagtttccgagggaaagtgcaaaacttttatatacaagtatgcactcttttgtcaactgttttctacagtccaccatcctttggtccccatgactgaacttttacatgcctggctttctgataatttgcacacttttcctttttaaatagaaagtatcactagacaaattgtcaatcataaccaaacaatgctgatgttacattttctccagagctgagattcgtattcagtttcgccatgttcctggcaatatctatcgtgaacgctttggccatgacatagatcttgacacaaatgagctgatcttgcgtgatcaacctgaagaagccatccttttgaaagtcaacaataaggtcccaggacttgggctccagttagatgcttcagaactcaacctgctttacagggataggtatggggaacacttgggtatcttgtgatctactatagaaatctggtattaaatcatttcacttattttataggtacaatgtcgaactgccagattcgtatgagcatcttcttcttgatgtgcttgatggagacagtcatctattcatgcgcagtgatgaagtagctgctgcatggaacgtgctaactccactaatccatgagattgatcagaatagaatagctcctgagctctacgaggctgggggtagaggacccgttaatgcgtactaccttgctgctaaacatggggtcagattggatgatgaatggtgaggggggataactggcctaattgctccaaatgtattgagagattcttttcgtttttaggtcagcaatgtacagtccctcttctattaccaaacctgattgacaaatttcatcaagaaatgcaacaaaaatagaaatggttcctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0318500, RefSeq:Os03g0318500