Os03g0320400

From RiceWiki
Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0320400| Description = SRA-YDG domain containing protein| Version = NM_001056487.1 GI:115452702 GeneID:4332670| Length = 2403 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0320400

Description

SRA-YDG domain containing protein

Version

NM_001056487.1 GI:115452702 GeneID:4332670

Length

2403 bp

Definition

Oryza sativa Japonica Group Os03g0320400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11610825..11613227

Sequence Coding Region

11611025..11611217,11611344..11612755

Expression

GEO Profiles:Os03g0320400

Genome Context

<gbrowseImage1> name=NC_008396:11610825..11613227 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11610825..11613227 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaagtaaccaacacaaagcatcagatccacaggattctatggttcatttagatctggatgaagataagataatggtgacatcagcattaccatgtccttcaatgtccgtgggaaaatcggttatgaggaagaggggaagaccaagcaggcatgcacgaggaacttcgttgtcttctgttaccccagaagggtgcaagaagatggagggtcgatcatataatttgcgtagtgattcaacaattttgttgagaaattcatgtttgctaatagctgatggatcgacaaaacagaagcgatcttggggacttgacaaggatgacttgcatatacctttctttcaaatttcagataatcctagggaagctgttgatgatatactcatgacatttggtggactacatcggaggatcatgcagttgatagatgtgaaaatggcttcaaaacagcttgtcttccaagcattgaacctcatgagaaaagttggatatcatgttaacaaggacaagagggttggagaggtcccaggagttaaaattggtgacatattctactctagaattgagatgctcttggtagggctacatagtaacatcaatagaggaattgaattcatgtctggtgcttttattaataaggaagataagatagctacatgcattgtgtcatctggaatgtatgagaatggtgatgatgacccatatactttggtatataatggccaaggcaaagtccaccataagcttgagagaggtaactattcgttgaatcagagttttattagaaggaatcatattagacttattcgtagtgaaccaaatccattggttaggctaggctcaaaggaaaaaatatacatatatgatggtctttataagatcgaagaaaagtacagacaaacaacaaaatctcgttctaacttaaagttcaacaagttggtcagggaactaggccagcctaatggcattgtagtatggaagaatactcagaaatggagggaaaatccatcttgtagagatcatgtcataatgcctgacatgtcaaatggtgcagaaatagctcgtgtttgtgttgtaaacaacattgatagtgaggatgctcctaacaactttacctattcaactaaacttgataatgggaatcatatggtttcagcaaacaagatgtgtgtctgcaaatgcacaagctcatgccttggtgaagacaattgctcttgtttgaaaacaaatggcagctatttaccttacaactcttcaggaatacttgtttgtcgaaagactatgatatatgagtgcaatgattcatgtgcttgcacaattaattgctcgaaccgagtggtacagaggggttcctatctacactttgaagtgttcaagacgatggatcgaggttggggccttcgcagttgggatcccattccggcgggtgcatttgtatgtgaatatgttggtgtagttattgacaaagatagcttagttgaagaagatgaatacatatttgaggttactagaccagagcataatttaaaatggaactatttaccagaattgataggtgaaccttctttctatgacatgaatgatacattcaagaagttgtgttaa</cdnaseq>

Protein Sequence

<aaseq>MESNQHKASDPQDSMVHLDLDEDKIMVTSALPCPSMSVGKSVMR KRGRPSRHARGTSLSSVTPEGCKKMEGRSYNLRSDSTILLRNSCLLIADGSTKQKRSW GLDKDDLHIPFFQISDNPREAVDDILMTFGGLHRRIMQLIDVKMASKQLVFQALNLMR KVGYHVNKDKRVGEVPGVKIGDIFYSRIEMLLVGLHSNINRGIEFMSGAFINKEDKIA TCIVSSGMYENGDDDPYTLVYNGQGKVHHKLERGNYSLNQSFIRRNHIRLIRSEPNPL VRLGSKEKIYIYDGLYKIEEKYRQTTKSRSNLKFNKLVRELGQPNGIVVWKNTQKWRE NPSCRDHVIMPDMSNGAEIARVCVVNNIDSEDAPNNFTYSTKLDNGNHMVSANKMCVC KCTSSCLGEDNCSCLKTNGSYLPYNSSGILVCRKTMIYECNDSCACTINCSNRVVQRG SYLHFEVFKTMDRGWGLRSWDPIPAGAFVCEYVGVVIDKDSLVEEDEYIFEVTRPEHN LKWNYLPELIGEPSFYDMNDTFKKLC</aaseq>

Gene Sequence

<dnaseqindica>201..393#520..1931#accctgcacaccaccctgttgcttccctacatccgctacttgagactcctcccctatcacctatctcttcctaccccatcacatcccgtcctcgatcagatacacctcctcttgtcacttccctctatccatcccatctccttcaccaaggccaccactccccctcatcatcatctcctcaaccaccccgtgtgtgcacaatggaaagtaaccaacacaaagcatcagatccacaggattctatggttcatttagatctggatgaagataagataatggtgacatcagcattaccatgtccttcaatgtccgtgggaaaatcggttatgaggaagaggggaagaccaagcaggcatgcacgaggaacttcgttgtcttctgttaccccagaaggtaataacattgtttctttaagaccttccttagacaaattggatatatctagtcaaagaaagagaggaagactacccaatcatgtgacatataattcagaggatccttctcaaacttgtattgtagggtgcaagaagatggagggtcgatcatataatttgcgtagtgattcaacaattttgttgagaaattcatgtttgctaatagctgatggatcgacaaaacagaagcgatcttggggacttgacaaggatgacttgcatatacctttctttcaaatttcagataatcctagggaagctgttgatgatatactcatgacatttggtggactacatcggaggatcatgcagttgatagatgtgaaaatggcttcaaaacagcttgtcttccaagcattgaacctcatgagaaaagttggatatcatgttaacaaggacaagagggttggagaggtcccaggagttaaaattggtgacatattctactctagaattgagatgctcttggtagggctacatagtaacatcaatagaggaattgaattcatgtctggtgcttttattaataaggaagataagatagctacatgcattgtgtcatctggaatgtatgagaatggtgatgatgacccatatactttggtatataatggccaaggcaaagtccaccataagcttgagagaggtaactattcgttgaatcagagttttattagaaggaatcatattagacttattcgtagtgaaccaaatccattggttaggctaggctcaaaggaaaaaatatacatatatgatggtctttataagatcgaagaaaagtacagacaaacaacaaaatctcgttctaacttaaagttcaacaagttggtcagggaactaggccagcctaatggcattgtagtatggaagaatactcagaaatggagggaaaatccatcttgtagagatcatgtcataatgcctgacatgtcaaatggtgcagaaatagctcgtgtttgtgttgtaaacaacattgatagtgaggatgctcctaacaactttacctattcaactaaacttgataatgggaatcatatggtttcagcaaacaagatgtgtgtctgcaaatgcacaagctcatgccttggtgaagacaattgctcttgtttgaaaacaaatggcagctatttaccttacaactcttcaggaatacttgtttgtcgaaagactatgatatatgagtgcaatgattcatgtgcttgcacaattaattgctcgaaccgagtggtacagaggggttcctatctacactttgaagtgttcaagacgatggatcgaggttggggccttcgcagttgggatcccattccggcgggtgcatttgtatgtgaatatgttggtgtagttattgacaaagatagcttagttgaagaagatgaatacatatttgaggttactagaccagagcataatttaaaatggaactatttaccagaattgataggtgaaccttctttctatgacatgaatgatacattcaagaagttgtgttaacaaccaaatttggtaatatcggcattgggaaagaagattagattgaagcgaagtcggaggcggagatcaagttcggaaacagagcagggattggctggagtccagattagctacgataagatcggctgagtctgagtcggactaggtaagccgatgtagccgatcctagcaatacaacttgatgtgtgatgtcgggttggattgaggtgcttcaaggtgattgccgcacatggatagagtcctgaggaggcaattgtatctattagttaggatgttttatgtaatttccttagagatatgattgggcaaaagtctgccgcaaagacttatagtatcttagagtttgttagagatagtagtcgtgtccgttatggacatatcttgtaattctcgggtataaatatacccgagccctatgtaacttttaacacacgttcaatacaatctcggcgcatcgccacccttttacttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0320400, RefSeq:Os03g0320400