Os10g0197132

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Revision as of 08:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0197132| Description = Histone-fold domain containing protein| Version = NM_001189129.1 GI:297727388 GeneID:9272034| Length = 3417 bp| Def...")
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Gene Name

Os10g0197132

Description

Histone-fold domain containing protein

Version

NM_001189129.1 GI:297727388 GeneID:9272034

Length

3417 bp

Definition

Oryza sativa Japonica Group Os10g0197132, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:6417505..6420921

Sequence Coding Region

6418634..6418909,6419298..6420779

Expression

GEO Profiles:Os10g0197132

Genome Context

<gbrowseImage1> name=NC_008403:6417505..6420921 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:6417505..6420921 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctggtgcccaactgcccaccgggacagcggatctaccagccgagtttcaagcgcgattacccgctggcccaggaggtttcggagtatagatcgcgtctgctgcacaaaatccatctctcctactgcaaggcgctggagcggctcagcctcagggtgaggccccgcatggctgcgagcttcgtcggcggcggcggcggcttctgcttgggtctcctcgaccctgtctccaacatcgtcgccaacaccctcttctcctacgggcgcgcggtgggcgacacccggagcgagtgtgatgagctcgtctacatcccccaagaaaagctcagggacctggagcaccggtcgctggacggcatggtggccttcctcacccgcttcttcccctacctcgccgacgccgaggccgtgcgcttccttctctacgccgaagccgacctgctcgtcgccgcccgcatcgtcgcgttcgacatcggcatgaggcgattcgggtcctccgggccagacatcgtcaacgaggccctcgagatggtcctcaagtgcgccgccctcgccgccaagcacccaaaccccgatcgcctagtcgccgactggttggccaccatcacccgcctcgacgacgccgtgcgccacctcgccgacgtgcaccgccgctcccctcaatccagcctcgataagctcgccgagctgctcgacgaggggtcgccgccggcggtagacgacgacaggtggggcccgtggcgactcatggattctcgtttgcctcctccccgcagcgtgccgtacaggcaatcccctgccctcaaggcgacgctccaggacgcgatccatggcttctacctcaaggcccttgcccggctgccggccagagagcttcgccgccgcttccaccgcagcctgctcgaggctggccactgctatggcccgttcgaccctgtctccaacatcatcatcaacaccatctggtatgatgcagcgttcccaccaacctttgaactggagctggacgtgatcggcacaatgggcctgtaccggatagagaatcgctccttgtatggcctcgtctccttcctctgcacacgttaccatcatatcgatttcaatcaagctatcaaataccttgtcaatgcagatggtcacctactcctcgctgatctctacctggatgatgagacagctgggttcaccacagctgttgattcccccccgctcaccggtttggaggaagcattcatggctgccgctaccgctgcctgtcaccctgaccctgatgctcaagcaaaggttttgcttctctgttcatctggtcaaatgctagaggatgcctcatcgctcctgcacggcggtggccaactctcctctgaagatgttcagttgcttgtcaggttgttgtgtcctgaggccacctgcagcagacagccacttcgcccattcccacgtccagagtacttgtttgcgcatacacgaatgtccgaaaaggaacccatgtatgagctgcataccatctgtggcgtgaacaattgcgtgtcgggcccagttggcactgatgctaagtgctttaggtctcatgtcaatttcctagcgactcccaaaggcactccattttctacctacagcaatccggtgcttttctttgcggaggttagcaatgataacaaagccgaagctggaacacaatccttctgctgcctcgtgtcagtgccgttaccatgcgctggtatatatgaacctagctacctgtctcaattgttttaa</cdnaseq>

Protein Sequence

<aaseq>MALVPNCPPGQRIYQPSFKRDYPLAQEVSEYRSRLLHKIHLSYC KALERLSLRVRPRMAASFVGGGGGFCLGLLDPVSNIVANTLFSYGRAVGDTRSECDEL VYIPQEKLRDLEHRSLDGMVAFLTRFFPYLADAEAVRFLLYAEADLLVAARIVAFDIG MRRFGSSGPDIVNEALEMVLKCAALAAKHPNPDRLVADWLATITRLDDAVRHLADVHR RSPQSSLDKLAELLDEGSPPAVDDDRWGPWRLMDSRLPPPRSVPYRQSPALKATLQDA IHGFYLKALARLPARELRRRFHRSLLEAGHCYGPFDPVSNIIINTIWYDAAFPPTFEL ELDVIGTMGLYRIENRSLYGLVSFLCTRYHHIDFNQAIKYLVNADGHLLLADLYLDDE TAGFTTAVDSPPLTGLEEAFMAAATAACHPDPDAQAKVLLLCSSGQMLEDASSLLHGG GQLSSEDVQLLVRLLCPEATCSRQPLRPFPRPEYLFAHTRMSEKEPMYELHTICGVNN CVSGPVGTDAKCFRSHVNFLATPKGTPFSTYSNPVLFFAEVSNDNKAEAGTQSFCCLV SVPLPCAGIYEPSYLSQLF</aaseq>

Gene Sequence

<dnaseqindica>2013..2288#143..1624#gaggaagatttccccttggttcgttgttctgttctatccccttctactccaccgagcaccggacgccgctccgttcaattcacgcccagtcgaatcacaacctccctcgctccctctgaccctctccggatggtcgccggcgatggcgctggtgcccaactgcccaccgggacagcggatctaccagccgagtttcaagcgcgattacccgctggcccaggaggtttcggagtatagatcgcgtctgctgcacaaaatccatctctcctactgcaaggcgctggagcggctcagcctcagggtgaggccccgcatggctgcgagcttcgtcggcggcggcggcggcttctgcttgggtctcctcgaccctgtctccaacatcgtcgccaacaccctcttctcctacgggcgcgcggtgggcgacacccggagcgagtgtgatgagctcgtctacatcccccaagaaaagctcagggacctggagcaccggtcgctggacggcatggtggccttcctcacccgcttcttcccctacctcgccgacgccgaggccgtgcgcttccttctctacgccgaagccgacctgctcgtcgccgcccgcatcgtcgcgttcgacatcggcatgaggcgattcgggtcctccgggccagacatcgtcaacgaggccctcgagatggtcctcaagtgcgccgccctcgccgccaagcacccaaaccccgatcgcctagtcgccgactggttggccaccatcacccgcctcgacgacgccgtgcgccacctcgccgacgtgcaccgccgctcccctcaatccagcctcgataagctcgccgagctgctcgacgaggggtcgccgccggcggtagacgacgacaggtggggcccgtggcgactcatggattctcgtttgcctcctccccgcagcgtgccgtacaggcaatcccctgccctcaaggcgacgctccaggacgcgatccatggcttctacctcaaggcccttgcccggctgccggccagagagcttcgccgccgcttccaccgcagcctgctcgaggctggccactgctatggcccgttcgaccctgtctccaacatcatcatcaacaccatctggtatgatgcagcgttcccaccaacctttgaactggagctggacgtgatcggcacaatgggcctgtaccggatagagaatcgctccttgtatggcctcgtctccttcctctgcacacgttaccatcatatcgatttcaatcaagctatcaaataccttgtcaatgcagatggtcacctactcctcgctgatctctacctggatgatgagacagctgggttcaccacagctgttgattcccccccgctcaccggtttggaggaagcattcatggctgccgctaccgctgcctgtcaccctgaccctgatgctcaagcaaaggttttgcttctctgttcatctggtcaaatgctagaggatgcctcatcgctcctgcacggcggtggccaactctcctctgaagatgttcagttgcttgtcaggttgttgtgtcctgaggccacctgcagcagacagccacttcgcccattcccacgtccagagtacttgtttgcgcatacacgaatgtccgaaaaggtccatgctgcattgagcacatatgctgcgatgccaaatggggttggtttatttcgcttgctcgttgctttcacactccctccgtttttaaatatttgatgttattgcctttttttaatttgtttgaccattcatcttattaaaaaaattaagtaattattaattcttttctgataatttgatttattgttaaatatactttcatgtatacatatagttttacatatttcataaattttttttaataagacgaacagttaaatatgtgctaaaaagtccacggtgtcgaacattagaaacatagagagtattttttatcacatactgtgtgtgtgctatccaaaatttgctcgccaatcaacttattgctgcctctgtccacttacaggaacccatgtatgagctgcataccatctgtggcgtgaacaattgcgtgtcgggcccagttggcactgatgctaagtgctttaggtctcatgtcaatttcctagcgactcccaaaggcactccattttctacctacagcaatccggtgcttttctttgcggaggttagcaatgataacaaagccgaagctggaacacaatccttctgctgcctcgtgtcagtgccgttaccatgcgctggtatatatgaacctagctacctgtctcaattgttttaatatctcatcatttaagttaacacctgaaaggcatggtcattacgtgtactttggttatctagatgttaattaacaaatttaactggctgttcgatttggcatttactcaaatcaacgtttaggttggtaatccaaatattcagatcaagtgacattgctctttagcaaagcggtcaacatatagctggatgaccttctaattaacctgcataacatttgcttcaagaaaaacacgcactataaaagcagctggccccttccatgaacctgttctgtatgcgtggcttacttagctatgcccagacttaggcacaataaggctctatgagactatgaatgatgaagtattttatatttattttcttaccatttacaatttttgctgcagcaatttgtgtgtattaattaccttaatttcttgttgacagaacgagtacggtgtctttactgtgatgacacggggattaagatcgtgcatcctattggggtagacttccatgggcggaagttggaatttgagaagatggtttgtggagaagacccctgcaatgacgatttcgatcctgaatcgatgcagccatattacaccaacatgagcatcattgagcatagcagcctcacaacggacagggttaatggtcgggtggaagaggatcgcctttacagtgatgaatatgatagtgatgatctatctttgatgagcgatgagtatgatagtgatttgtgttccatgactgatgagtatgatattctttaccctaaaatagtatcatgttgtcgccattattaaaaagttgttgaattagacgccactatttgtagtgtagtgctccgactatgctatcaattcatggatagctttgtcttagcctgagtttaagatgatgctcatgtttttaacaagtgtccattgtatataatatcctagaatgttcatttgtgatggtatttagtagttagaatcgattgtttgcatgacccctttagttttgaacttcaatgaagacctgctttattttacttcggtgaggtcatcaatagccgaatgaaatttcatcgtgtcgttcgttttgctatgctttttctgttgccaggattctcgcaagattcagtttatatagtcatgcca</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0197132, RefSeq:Os10g0197132