Os03g0323500

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Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0323500| Description = Arf GTPase activating protein family protein| Version = NM_001056509.1 GI:115452746 GeneID:4332692| Length = 5463 bp...")
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Gene Name

Os03g0323500

Description

Arf GTPase activating protein family protein

Version

NM_001056509.1 GI:115452746 GeneID:4332692

Length

5463 bp

Definition

Oryza sativa Japonica Group Os03g0323500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11775669..11781131

Sequence Coding Region

11775934..11776038,11776177..11776238,11776564..11776651,11776733..11776794,11777025..11777121
,11777367..11777756,11777847..11778386,11778631..11778741,11778877..11779044

Expression

GEO Profiles:Os03g0323500

Genome Context

<gbrowseImage1> name=NC_008396:11775669..11781131 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11775669..11781131 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcgtccaggaaggaggaggagaggaacgagcgggtcgtgagggggctcctcaagctgccgcccaaccgcagatgcatcaactgcaacggcctcgggccgcagtacgtgtgcacgagcttctggacattcgtctgcatctcctgcagcggcatccaccgtgagttcacgcaccgtgtgaagtcagtatctatgtcgacgttcaccacgcaagaggtcgaggccctccagaacggtgggaatcaaagagccagagaatcgttcttaaaggaatttgatgctcagaaaatgaggctacctgatagcagcaatgtcgacagtcttagggaattcataaaagctgtttatgtggagagaaggtatgctggtggaaggttttctgaaaggcctccaagagataaacagaatcaaaagaacaatgaacaagagcatagaagggctagttcgtaccattcattttctcagagcccaccttatgattaccaatacgaagaaagacgcaatggcaagcaatccgtgatgctaactaggaaacctggttcagatagggggcatgatgggaagatgtctggatttgcttacagtccacagagcctgcatgagaggatgtcagaagaccgatttgccaatgagaattctggaccaagaatttctgactgctcagggtcaagcatcagtaatacatttagaacgacaccacactcaccgaatttccttgataaagggtgttccagcccctctatgcaacaaaatcaatcaaacatacaggcttctagtggaatcactcaatctgagagaactatatcaacaggaaacatagattcgtcatctacaaaatcaagcaaatcaagcttagctgatatgttttttgaatctgatattgctcatagaactcagcaaacgaaggattgcattactccaagtttcacagctttctctgatgttgccaacattgcacagaaagatctccttaatgagcctgttgcgcagcaacaacctgtaactggtttggatcaaccagtagatttttttgctagcatgcctccggcaactccatccactgatagaatgctcacagcagctccatcaatggacaatgctgggtgggctacatttgacacaccaccagaagaaaagcaacctggagtgattgggctttctggcatttccgtaatggataaacatgctttgagtggtgatttgttttcgtttgaaccaaataatgatcaaccaacgtggctccagagctcaaagacatcaaaaaataatgcttctgtgactgatcagtctgatgtaccttgtaaatatacatcctctgatgcaagtaattctcaggcttggagtgcttttgaggccaaaagtgttagcacccaacaagcctcgccagatctttcactaatgagttctatagaacctaaagaaccaattgatgaaaataaattgcagctctggcattcattcgatgatgcaagtgagactatgactctcaatctgtccaatgctcagctgcaaactaatgagcacaagaatgttgataacaattccctaacaacaagcaatccatttacttgctccataacgtcaaaggtacccctttgctccataacaacctaa</cdnaseq>

Protein Sequence

<aaseq>MAAAASRKEEERNERVVRGLLKLPPNRRCINCNGLGPQYVCTSF WTFVCISCSGIHREFTHRVKSVSMSTFTTQEVEALQNGGNQRARESFLKEFDAQKMRL PDSSNVDSLREFIKAVYVERRYAGGRFSERPPRDKQNQKNNEQEHRRASSYHSFSQSP PYDYQYEERRNGKQSVMLTRKPGSDRGHDGKMSGFAYSPQSLHERMSEDRFANENSGP RISDCSGSSISNTFRTTPHSPNFLDKGCSSPSMQQNQSNIQASSGITQSERTISTGNI DSSSTKSSKSSLADMFFESDIAHRTQQTKDCITPSFTAFSDVANIAQKDLLNEPVAQQ QPVTGLDQPVDFFASMPPATPSTDRMLTAAPSMDNAGWATFDTPPEEKQPGVIGLSGI SVMDKHALSGDLFSFEPNNDQPTWLQSSKTSKNNASVTDQSDVPCKYTSSDASNSQAW SAFEAKSVSTQQASPDLSLMSSIEPKEPIDENKLQLWHSFDDASETMTLNLSNAQLQT NEHKNVDNNSLTTSNPFTCSITSKVPLCSITT</aaseq>

Gene Sequence

<dnaseqindica>266..370#509..570#896..983#1065..1126#1357..1453#1699..2088#2179..2718#2963..3073#3209..3376#actagtcatttccacacccgttattcccaaccgcatcgcgtcgcgtcgccggctcaagcaaacgcaccggcgcctctcgccgtcgccgtcgccgccatctaccagcgccttcttctccggcgcatccgtttcacgccctctcacttcctcgccggtttccacggaggagggagcgatccaatcctccgaggaggcggcggcggctgcgggatcgcgggattcgtcgttcgatctgtgtggctgcgggtgcgggggggagtggtcgatggcggcggcggcgtccaggaaggaggaggagaggaacgagcgggtcgtgagggggctcctcaagctgccgcccaaccgcagatgcatcaactgcaacggcctcgtaaggatttttcccttccgccacactcgcagctgctcgccgatctcctctcgtgtgtgtgcttctgatccggagtgatttgtttttttttccttgttgtactgaaccctctccgtgtgtgctggaactctgatccaggggccgcagtacgtgtgcacgagcttctggacattcgtctgcatctcctgcagcggcatccagtgagtgctgggctctcgcctctgttaattttggactaattttgtgtagtgtattgcatccatgtgccagcggacatagtattcgtagttattttctagttcatgcttgtcgatgcgacgagagttcagttgacctgttcatcagttcagtttatttatttcagtcttgtgggattagcgtgcttagcatacatagcatttcatttattattgtagtgaaaatttttaccgtgtcagaggctcagagtcgtcaagttctggtctccttgtgaaggagctttatatgttctcttctgttattctgacacattcatggaatttttagccgtgagttcacgcaccgtgtgaagtcagtatctatgtcgacgttcaccacgcaagaggtcgaggccctccagaacggtgggaatcaagtaaggcgatccattgggttggtttgagcttggaaatcccccttttggttcatgtcatgactcttaaactgaatgacgcagagagccagagaatcgttcttaaaggaatttgatgctcagaaaatgaggctacctgatagcaggtaaaaagctttgtcactatagtgttaccagtatggcgttagccactgagaacacctccattttgttgtcctttttgtttttcaccttttatgctttgttaatcgctacttctttattatttcaagggcatccttctatccttctcttttaaagttaccaatacatactttgtcttgtgaatacatatatagtgggcacagtacatgcttacgctaaactatttttgcagcaatgtcgacagtcttagggaattcataaaagctgtttatgtggagagaaggtatgctggtggaaggttttctgaaaggcctccaagagataaacaggtatgtttagcttaatttacaacatctagttagtctgcatgagaactgttctttacctgtccatttgttatcacaaagcttttgaatttctgcttcagtatgcgtagatgacaatgaatactttcatagaagttcattcatgttttttttcctgtgattctttggaaattttaagttttcattttctcaacgtatattctgccaaaatgcttctctcttaactaattcatgttccatcaatgcagaatcaaaagaacaatgaacaagagcatagaagggctagttcgtaccattcattttctcagagcccaccttatgattaccaatacgaagaaagacgcaatggcaagcaatccgtgatgctaactaggaaacctggttcagatagggggcatgatgggaagatgtctggatttgcttacagtccacagagcctgcatgagaggatgtcagaagaccgatttgccaatgagaattctggaccaagaatttctgactgctcagggtcaagcatcagtaatacatttagaacgacaccacactcaccgaatttccttgataaagggtgttccagcccctctatgcaacaaaatcaatcaaacatacaggcttctagtggaatcactcaatctgaggtggtaaatattccactctaaacaaataattggttttcctttcttttcataccaaacaagacatgtattaattttgattgctttctgcagagaactatatcaacaggaaacatagattcgtcatctacaaaatcaagcaaatcaagcttagctgatatgttttttgaatctgatattgctcatagaactcagcaaacgaaggattgcattactccaagtttcacagctttctctgatgttgccaacattgcacagaaagatctccttaatgagcctgttgcgcagcaacaacctgtaactggtttggatcaaccagtagatttttttgctagcatgcctccggcaactccatccactgatagaatgctcacagcagctccatcaatggacaatgctgggtgggctacatttgacacaccaccagaagaaaagcaacctggagtgattgggctttctggcatttccgtaatggataaacatgctttgagtggtgatttgttttcgtttgaaccaaataatgatcaaccaacgtggctccagagctcaaagacatcaaaaaataatgcttctgtgactgatcagtctgatgtaccttgtaaatatacatcctctgatgcaagtaattctcaggtgaggaatatttgcattgctctagaaaaaacttttttcatatgctctcatgttaggacatacatgcaacaaaatgcagtccattcttcaaaaaaatggtcattgtgtttttgcatgtatcatttgcaaatgcacgagaattattttttcattttttaaaaaaaaaaatctgattgtgccacactactatgatattccacttttgcatttaaacttataaatagtatttttcacatttcttcaggcttggagtgcttttgaggccaaaagtgttagcacccaacaagcctcgccagatctttcactaatgagttctatagaacctaaagaaccaattgatgaaaataaattgcaggtgagtaaattatgaaacttgtgaataagcaagttatttcctgttgctgcaatgctattctggtatttgacctatcctgttaagtgtcaaccgtttccccagaacttagtagtgtcccttgttgtgtttttgcagctctggcattcattcgatgatgcaagtgagactatgactctcaatctgtccaatgctcagctgcaaactaatgagcacaagaatgttgataacaattccctaacaacaagcaatccatttacttgctccataacgtcaaaggtacccctttgctccataacaacctaatatatttttccgtcatgtaggaatctcgtggtaatgattcccaagaaattttcatgggtggattagctcctagcgaaccctttgctccattccctgagccatcactgtttgctactacttccgtggtaatttagatatttagcatatctgtacacttctgctgttccttgaagtgattctggatctggaatataatgccaccgtttacagggagaagcctctgtacagcagatgccgttgaatccatttgatcttccatttgatgctgactcggattctccagatatggtatgctattcttttttgcacatagtagccaataggatccaaaaatggcaaaccagtcaaaccaccgagtcctgttttttggcaccccagaaatcatattggcaactttaaatatttaaatatgtaaagggaaaaatgacatttaaaatggaagagatagaaactggaagcaaacacccgtggcttggttcatttgcaatttccactatgttacagagttatttcttcattccctgctttcaatgcatttgagtatcaagcattttatggatggtactgttgacatgattggaagctgttaatatcgttttgtgctactgtcacttacctatctacggtgaatactgtggactgaatatatgtttagaatttgacgatgtggaatagacgtattgatgatgaaacagtagataaccctttcataattctcatggagacggacatggcacccacatgatccaatatagatgcaaaatacagtttccagagtagcatttgttgtggattggctagggtaaggatccgaagaccaggagatagggcactggccctctccctgctgagctaaaagaggctttgaggctttgatttttatattttgggacagaggaagtacttattttcatactgaaaaccgtgtaatctgattctttaataataaatgaataattattgatttacctagagtcagcataacacattcttcaaaatggacagtctgttgtatgtagtgctggtcagcatggcattttgcccatcagttatctgaacagcactccattttgcagtttatggatgtgacagcgttgcaagcggttttgcctaatgctgacctatcaacttctttcgttgatggtttgccggaaacatggttctccaacaatgcgtccgcttatgttccaccggggtcacatggtaagcttaactctgagtctctggcaaccatctatctaccttcgcatagcttgttcctgcaaacatatagagcttgtgggaggttttaacggcccatgcatcttcaggtggacctccatgccttgtcgagcaaatccccaactctgcactcaggtaagctgctttgacctgcttctgtccaatatggcatcacttgctattcatccatacgctgaaatcagccttgtttatttcaggaacataacattgagcgctgtatcaactggaaatccttttgcatagaaaatggcctcagccttcagtttacaaactagaaaagctaaaggctcggtaaaatccttttccaaaaagcagctcaccagtcaccaccaaattaccaattggtgtgtgattccgtcctttggttagtgaaactatgcatatgtacaaacaaggaggaacatcgtgaaggggactgtgcggagaaattttgcacacatatggtacaaaccaaggaggaacatcatgaaggggactatacggataggataggatgcgactcgttggttgtggcaaatgacaagctcggatgtgggaaatggtagactttctcacaaatcttatcaacaactgaaaatcagttttagtgtattttctttaggcaaatgtgtacggataccattgctccttggagctatagtgcagcatgttagctgcggagttcactggaaagatttttttttttttgtggaagtgattatttagattcctcggtatatggatcagtcccagaatcctattttcagtttttttttggactaaactaacattatagattgtcttcatttccacaatagatctgagaattcgttttttttaacaaaaatctaagaaggattcactcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0323500, RefSeq:Os03g0323500