Os03g0325600

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Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0325600| Description = Homeodomain-like containing protein| Version = NM_001056520.1 GI:115452768 GeneID:4332705| Length = 3602 bp| Defini...")
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Gene Name

Os03g0325600

Description

Homeodomain-like containing protein

Version

NM_001056520.1 GI:115452768 GeneID:4332705

Length

3602 bp

Definition

Oryza sativa Japonica Group Os03g0325600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11895899..11899500

Sequence Coding Region

11896459..11896476,11896794..11896969,11898653..11899445

Expression

GEO Profiles:Os03g0325600

Genome Context

<gbrowseImage1> name=NC_008396:11895899..11899500 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11895899..11899500 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggggagcagtaatagcccggataggcagtcgtcgggcggcagcccgccggaggagcgcggcggcgggggaagcggtggaggaggagggcggagcgccgccggcgagccggtgcggtcgcggtggacgcccaagccggagcagatactgatcctggagtccatcttcaacagcggcatggtcaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagaggttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcgcgccgccgccagcgccagatgcaggcggccgccgccgccgccgcagcggcggcctcttcctcttccccatccgccaacacctctcccgcagccgcgagcgccgccaccgtgcaggtgggcctcccgcccggcgccgtcgtccacaccatggccatgggtgggagcgcgtgccagtacgagcagcaggcgagctcgtcgtcgtcgtccggcagcacgggaggttcgtcgctggggctgttcgcgcacggcgcgggggcctccggcgccggcgggtacctgcaggcgtcgtgcggcgcgtccgcgtcggcgtcgtcggcgctggcgcccgggctgatgggggatgtggtggacagcgggggaagcgacgatctcttcgccatctcgaggcagatggggtttgtggggagccctcgctgctcgccggccagctcgccggcgacgccgagctccgcggccaccgccgcgcagcagcagttctactcatgccaattacctgcagcgacgatcacggtgttcatcaacggagtcccaatggagatgccgaggggtccaatagacttgcgagccatgttcggccaggatgtgatgctcgtccactctactggggccctcctcccagtcaacgactatggaatcctaatgcagagcctccaaatcggagagagctactttctggtcgctaggccaccttaa</cdnaseq>

Protein Sequence

<aaseq>MEGSSNSPDRQSSGGSPPEERGGGGSGGGGGRSAAGEPVRSRWT PKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ RQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGLPPGAVVHTMAMGGSACQYEQQ ASSSSSSGSTGGSSLGLFAHGAGASGAGGYLQASCGASASASSALAPGLMGDVVDSGG SDDLFAISRQMGFVGSPRCSPASSPATPSSAATAAQQQFYSCQLPAATITVFINGVPM EMPRGPIDLRAMFGQDVMLVHSTGALLPVNDYGILMQSLQIGESYFLVARPP</aaseq>

Gene Sequence

<dnaseqindica>3025..3042#2532..2707#56..848#aaccaacgctcgatcttttacttaccctatctcccgacgatcgatcgatcgatcgatggaggggagcagtaatagcccggataggcagtcgtcgggcggcagcccgccggaggagcgcggcggcgggggaagcggtggaggaggagggcggagcgccgccggcgagccggtgcggtcgcggtggacgcccaagccggagcagatactgatcctggagtccatcttcaacagcggcatggtcaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagaggttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcgcgccgccgccagcgccagatgcaggcggccgccgccgccgccgcagcggcggcctcttcctcttccccatccgccaacacctctcccgcagccgcgagcgccgccaccgtgcaggtgggcctcccgcccggcgccgtcgtccacaccatggccatgggtgggagcgcgtgccagtacgagcagcaggcgagctcgtcgtcgtcgtccggcagcacgggaggttcgtcgctggggctgttcgcgcacggcgcgggggcctccggcgccggcgggtacctgcaggcgtcgtgcggcgcgtccgcgtcggcgtcgtcggcgctggcgcccgggctgatgggggatgtggtggacagcgggggaagcgacgatctcttcgccatctcgaggcagatggggtttgtggggagccctcgctgctcgccggccagctcgccggcgacgccgagctccgcggccaccgccgcgcagcagcagttctactcatgccaattacctgcaggtgagttgatcagttaccacatcaatcttggttttggccattgctaatttgctatttcttcccttcaatatttggttggttagctactcagtactcaccgatcaatctcgtattctcatgcatgtgtttcccatgtctcgatcgcttaagggattaggttatttattaatttgttcatcttttcatcgaaatggctctaatcttaacacacttactcttgtgattttacaagttattgtgatttctactactatactgcatatatcacctgatcgaagaaacttatgaaggtgtaaatatgctgatcatttcaccactaaaattttgtctgtttgtattgtagtgctgcagaattcaaggagatctagtttggatcttttgcgtgtgcatactttatttggccttccatataattaattgtgtcagttcttgttctttagctcttcactatactatttcggttacaacttacacttcctagctagtgtaccggcacataagatcatactacataataattcaccatgcatgacactttccttttgaaagatcacaatgatatgttcctacgttttgcgaagccttgctcttgtgtctagctatgttcttaattacttgtacggtgtattccagactgaattgtacaattttcaaaattttagggagccttgcctggtgttaatgatatgcatacactagaaagtactccctccatctcaaaatataagaatctagtaatggatggaacatatcctacttcgaatctggatagatagtctatccaaattcgtagtattagaatgtgtctcatctagtattatgttgctatattataggacggaggaaatactcctataattctaggatgtatcatacaattttaaaaattaaccaatacccaaaaatgagaattacaaaataaacacattagtaattttccatagattctaagcatgcatgcacccacccaactgtcttcagattcttctcaccgtgtatatgttttttttgtcaattatatccatttgaagctccatgtagcacacaatagagttagcacacatgtttatgcatgatccaatcatttgatgcctgtatgtcaaatagtaaattaattttggcaatgtaactttggttacattattatgatttactaaatgcatgcatgcatgagcaatccatcctactttggtaatttttcttgctttcttactgacatgttatatgtacaatctatcatcaattaatttaccaactagctacttaattctgagctaaaaacaagccacagtataattcatgcatgtcgcatgcatgcaaatgtgtgtaatgcccatgcatgctattgcagatggagcaacaatataatttcagaatatcctctcatgcatttgcagaactcttattggaatcaaatagactaggtgcatatgccaatatgataaaggattagaggtcccaaagtcccaactcccaactggggagtaaacggtagtaccgagtaccgaccaactaattaacgatattgataatctcatcattggataatttgtttggctagcttctgcatctgtttgttgctaattttgtcgtcaatgagctgttgatatttcttgtgagtggattatatatatgctggctagatgctgattggttgctggtttgattgcctgctaattccagcgacgatcacggtgttcatcaacggagtcccaatggagatgccgaggggtccaatagacttgcgagccatgttcggccaggatgtgatgctcgtccactctactggggccctcctcccagtcaacgactatggaatcctaatgcagagcctccaaatcggagagagctactttctggtaaccatccatctccaagctcttactagctggtctcatcgctctctctctactccgatcagtcaatgcagtttcgtcttcatgaaagcaccacatttttaggcatgcattcatgcttatatatgtgtatcatgtttgaatgtgcaaaactaattactattaatttaattaattgcatgcatgtttgtgtgaattgtgaaatgcatagctagctattgttgtgatcttcttaatttcctgcttaatgaggagtacatttatatgtgtgtatgtgtgtttctgatcatcttcaatgtgttgtgtttcctgatcgacaggtcgctaggccaccttaaaaacgagttctcgatctatccttgcagtagatagtcagatatatatctctactcgatactcattggatcagatgcatgagccggccggggtgcagctagttctcagttaatcatcaatcaagaatgctgtcttggattcaagaccttggagtatgtctaaatcgatcaatcgtctatcgagaacaagactatatatattagctaggtacgagaagcaaattaatgcatgcattgcagcatatcgatcggcaaaagtacaactacgtacttatatatatgccccttaattaaaaacctatgaaagcgtgggcggtcgagtttgttgtccttagaatacagattacaatatggtcgcgtctcttctcatcattttcacaattccattacaatatgcatgtatgcatgcctgcccttggcagtcgagctatatatattctttaatttgtgctagctatagatgcacgtttgtattgtttttttttaccgtgtgatgtaatgctatatgtgtcagccaaacgcgcctggaatgttggtgcttgattcaaggccggttggaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0325600, RefSeq:Os03g0325600