Os03g0326200

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Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0326200| Description = Phospholipid-transporting ATPase 1 (EC 3.6.3.1) (Aminophospholipid flippase 1)| Version = NM_001056525.1 GI:115452778...")
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Gene Name

Os03g0326200

Description

Phospholipid-transporting ATPase 1 (EC 3.6.3.1) (Aminophospholipid flippase 1)

Version

NM_001056525.1 GI:115452778 GeneID:4332710

Length

3830 bp

Definition

Oryza sativa Japonica Group Os03g0326200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11945062..11948891

Sequence Coding Region

11945285..11945507,11945642..11945966,11946988..11948587

Expression

GEO Profiles:Os03g0326200

Genome Context

<gbrowseImage1> name=NC_008396:11945062..11948891 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11945062..11948891 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgaccggaacggcaatcgggtgaagaggccatggacgtcgtgcaggccaggctgccggacccggtgccatcgccgatcctgaggcactcgccgtcgacgtctcggtcactgcggtccgtgggcgacatgccgtcggtcacgttcgcgggcgacatgaggtcgggctcctgcagggccgagtccaccgcgtcatccttcgagagcttccggcgcgccgggtcgcggccgcaaccggttggcgccgtcgcgcggatgcccacgaggcggtccgcgtccgagcgcgccggctcgcagcgggacctccgcgacgaggacgcccggttcgtgtacgtgaacgacgcagcgcgcaccaacgcgccgccggccaagttcccggacaactcggtgacgacgaccaagtactccgtcctcaccttcatcccgcgcaacctctacgagcagttccaccgggtggcctacgtgtacttcctcatcctggcggcgctgaaccaggtgccgcagctcggcgtgttctcgccggtggcgtccgtcctgccgctggcgttcgtgctcggcgtcacggccgtcaaggacgcgtacgaggactggcggcggcaccggtctgacaagaccgagaacaaccgcacggcgtcggtgctggtcgacggcgtgttccagccgaagccgtggagggagatacaggtgggcgagctggtgcgcgtggtggccaacgagacgctgccgtgcgacatggtgctggtgtcgacgagcgaccccaccggcgttgcctacgtccagaccatcaacctcgacggcgagtccaacctcaagacgcggtacgccaagcaggagacgatgtccacgccgccggaggcgctcgcggggctcatcaagtgcgagaagcccaaccgcaacatctacggcttcctcgccaccgtcgacctcgacggccgccgcgccgtctccctcggcacctccaacatcatgctccgcggctgcgagctcaagaacacggcctgggccatcggcgtcgcggtctacaccgggcgggacaccaaggtcatgctcaacaactccggcgccccctccaagcgcagccgcctggagacccacacgaaccgcgagaccatcgtgctcgccgtcgtcctcaccctcctctgcaccctcgtctccctcctcgccggcatctggctgagcgaccacagcgacgagctgggcgtcatcccctacttccgcaagaaggacttctccaatcccaacgaggccgagaagtacaaatggtacggcacgggcgcgcaggtggtgttcacgttcatgatggcggtgatccagttccaggtgatgatccccatcgcgctcttcatctccatggagctcgtcagggtcgggcaggcctacttcatggtgcaggacgagcacatgttcgacgacaagaggcaggccaagttccaatgccgggcgctcaacatcaacgaggacctgggccagatcaagtacgtcttctccgacaagaccggcacgctcaccgagaaccgcatggagttccgctgcgccagcgtgcacggcggcgacttcagcgagaccgacggcggcgacgcggacggccatgccgtggccgcggacggcgtggtcctgcggccgaagacggcggtcaagacggaccccaagctgatggcgatgctcaaggacggcaccggcgccaaggccgacgctgcccgcgacttcttcctcacgctggtcacctgcaacactatcgtgcccatcatcgtcgacgacgacgaggacaacgacgacccggcggcagcggcggcaaagctggtggagtaccagggcgagtcccccgacgagcaggcgctggtctacgctgccgctgcgtacggctacacgctcgtcgagcgcacctccgggcacatcatcatcgacgtgtttggcaccaggcaaaggataataatgggctatctagggtttagcatgattgcggggactaatgagtgtgggacaagggcaaagcaacagatcaggataaaggttgtggcaaatgtcaccaaatcttgggccctgacggctgatgatccattgctaaatgctctgcatccgatcagcaaaaagtactcccaactgctccacctcgctacaagtcaaacgtgtgtggctgcaggctgctag</cdnaseq>

Protein Sequence

<aaseq>MRPERQSGEEAMDVVQARLPDPVPSPILRHSPSTSRSLRSVGDM PSVTFAGDMRSGSCRAESTASSFESFRRAGSRPQPVGAVARMPTRRSASERAGSQRDL RDEDARFVYVNDAARTNAPPAKFPDNSVTTTKYSVLTFIPRNLYEQFHRVAYVYFLIL AALNQVPQLGVFSPVASVLPLAFVLGVTAVKDAYEDWRRHRSDKTENNRTASVLVDGV FQPKPWREIQVGELVRVVANETLPCDMVLVSTSDPTGVAYVQTINLDGESNLKTRYAK QETMSTPPEALAGLIKCEKPNRNIYGFLATVDLDGRRAVSLGTSNIMLRGCELKNTAW AIGVAVYTGRDTKVMLNNSGAPSKRSRLETHTNRETIVLAVVLTLLCTLVSLLAGIWL SDHSDELGVIPYFRKKDFSNPNEAEKYKWYGTGAQVVFTFMMAVIQFQVMIPIALFIS MELVRVGQAYFMVQDEHMFDDKRQAKFQCRALNINEDLGQIKYVFSDKTGTLTENRME FRCASVHGGDFSETDGGDADGHAVAADGVVLRPKTAVKTDPKLMAMLKDGTGAKADAA RDFFLTLVTCNTIVPIIVDDDEDNDDPAAAAAKLVEYQGESPDEQALVYAAAAYGYTL VERTSGHIIIDVFGTRQRIIMGYLGFSMIAGTNECGTRAKQQIRIKVVANVTKSWALT ADDPLLNALHPISKKYSQLLHLATSQTCVAAGC</aaseq>

Gene Sequence

<dnaseqindica>3385..3607#2926..3250#305..1904#ctgactttcttttctgcctccaattccattccatctccccgtatccatcagcaaccacaccccctctccgctcgggacactcgtagcgcgcggcacctgatccgaccagacgatcgtgagcttctcctcgtccttccttcgggctccccgtctctctcgtgcaaaccaccaagccgtcgatccctccaacaattgtgccgcgcgctcgtcttgtaaactccagtgcacgggcacgtttagtgatgatccctccttgctaaaaccccaatcgttttttctgccagttagtgcgaattcgccaagcatgcgaccggaacggcaatcgggtgaagaggccatggacgtcgtgcaggccaggctgccggacccggtgccatcgccgatcctgaggcactcgccgtcgacgtctcggtcactgcggtccgtgggcgacatgccgtcggtcacgttcgcgggcgacatgaggtcgggctcctgcagggccgagtccaccgcgtcatccttcgagagcttccggcgcgccgggtcgcggccgcaaccggttggcgccgtcgcgcggatgcccacgaggcggtccgcgtccgagcgcgccggctcgcagcgggacctccgcgacgaggacgcccggttcgtgtacgtgaacgacgcagcgcgcaccaacgcgccgccggccaagttcccggacaactcggtgacgacgaccaagtactccgtcctcaccttcatcccgcgcaacctctacgagcagttccaccgggtggcctacgtgtacttcctcatcctggcggcgctgaaccaggtgccgcagctcggcgtgttctcgccggtggcgtccgtcctgccgctggcgttcgtgctcggcgtcacggccgtcaaggacgcgtacgaggactggcggcggcaccggtctgacaagaccgagaacaaccgcacggcgtcggtgctggtcgacggcgtgttccagccgaagccgtggagggagatacaggtgggcgagctggtgcgcgtggtggccaacgagacgctgccgtgcgacatggtgctggtgtcgacgagcgaccccaccggcgttgcctacgtccagaccatcaacctcgacggcgagtccaacctcaagacgcggtacgccaagcaggagacgatgtccacgccgccggaggcgctcgcggggctcatcaagtgcgagaagcccaaccgcaacatctacggcttcctcgccaccgtcgacctcgacggccgccgcgccgtctccctcggcacctccaacatcatgctccgcggctgcgagctcaagaacacggcctgggccatcggcgtcgcggtctacaccgggcgggacaccaaggtcatgctcaacaactccggcgccccctccaagcgcagccgcctggagacccacacgaaccgcgagaccatcgtgctcgccgtcgtcctcaccctcctctgcaccctcgtctccctcctcgccggcatctggctgagcgaccacagcgacgagctgggcgtcatcccctacttccgcaagaaggacttctccaatcccaacgaggccgagaagtacaaatggtacggcacgggcgcgcaggtggtgttcacgttcatgatggcggtgatccagttccaggtgatgatccccatcgcgctcttcatctccatggagctcgtcagggtcgggcaggcctacttcatggtgcaggacgagcacatgttcgacgacaagaggcaggccaagttccaatgccgggcgctcaacatcaacgaggacctgggccagatcaagtacgtcttctccgacaagaccggcacgctcaccgagaaccgcatggagttccgctgcgccagcgtgcacggcggcgacttcagcgagaccgacggcggcgacgcggacggccatgccgtggccggtaagtaactttcagtttattcggttggaattggaaatcaacgctaagctccgctgactagtcatcgattgacagctgctagtcgttttagttagcacacctgaactgacaagatggtaaaattagtcgtagaaatggcacttgtcagttgcatcaatgattcaaactgacatgctgcttgaagcttccatcaatgctgacccagagcagaaatgggtacaccggtgtaccaaagcacgttgagtttgcgcaaactgcaagctagaaacgccggaacaaatagttggatggtggtatccttacagtgccatcttaatttagccggtcataagctttgactagttaggagtactagtatctggcaccgtcgaagtcaaagcttttcaacaaacttttcgcccctctttgataatttgatcccacgtagaaaaatgccctttttccagcacatggacatacggtttttaagctgtatctccagttgcgtcaaaaaaagctgtatctccagctgaaagtgttgctgcttttgttgccatttgactgtcttgttcgtacattgttataacctagctagagaacggcataaccaaggatcatccatcgtactactcctggacaaaaacgaattagtcttggataagaatagaacattaaaatcactagacatccgtcctcaactaatccaatatttatcttgcattctttagggattccaatgtactcctaccaataacgattgatcatcaccactcattttcacctggttttaaagcctgacgtagaagcagagcaattacttggcaaaatgctgtacacctgctggtgttaattaaccaatcggaatttcatctcatttaattaaacaaggggaaaacgtggcagttttggggttgccaccagcagtgctgctagcctgctactgatgaccgattcagctgcaacccatctgaaactttagctgcaactcgtctgaaaatatttctgaatcatgtgccgtggtacgtctgcttctttggtgcagcggacggcgtggtcctgcggccgaagacggcggtcaagacggaccccaagctgatggcgatgctcaaggacggcaccggcgccaaggccgacgctgcccgcgacttcttcctcacgctggtcacctgcaacactatcgtgcccatcatcgtcgacgacgacgaggacaacgacgacccggcggcagcggcggcaaagctggtggagtaccagggcgagtcccccgacgagcaggcgctggtctacgctgccgctgcgtacggctacacgctcgtcgagcgcacctccgggcacatcatcatcgacgtgtttggcaccaggcaaaggtatggacgacgaacccatcacctgcaaattctatgtttccggttgctttttttgtttttttggctgtgaaattgcattgcttgcttctgattggattgcattgctttgggtgaaatctctgcttgcttgttaggataataatgggctatctagggtttagcatgattgcggggactaatgagtgtgggacaagggcaaagcaacagatcaggataaaggttgtggcaaatgtcaccaaatcttgggccctgacggctgatgatccattgctaaatgctctgcatccgatcagcaaaaagtactcccaactgctccacctcgctacaagtcaaacgtgtgtggctgcaggctgctagtgacaacagatcaggataaataagatcgttatttttttaagtagtactactaccggttaggtttgttgtttgtatcgtactagtaccgtgttaggcctcttgaccaatcatatctggcagtccttaccctggctcattatactacagtatgtacgtacgggcaacccaaatttcaggctagaatattagtgttgaaatcaattttctaagcatgattatggac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0326200, RefSeq:Os03g0326200