Os03g0327600

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0327600| Description = Ricin B-related lectin domain containing protein| Version = NM_001056530.1 GI:115452788 GeneID:4332715| Length = 223...")
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Gene Name

Os03g0327600

Description

Ricin B-related lectin domain containing protein

Version

NM_001056530.1 GI:115452788 GeneID:4332715

Length

2230 bp

Definition

Oryza sativa Japonica Group Os03g0327600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12007999..12010228

Sequence Coding Region

12008641..12008642,12008892..12009120,12009230..12009736,12009846..12010154

Expression

GEO Profiles:Os03g0327600

Genome Context

<gbrowseImage1> name=NC_008396:12007999..12010228 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12007999..12010228 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcggcttcgggcaccacggccaccatggccaagaccagccgccccagcaccacggcggcggcggcggcggcgcgcaccagcccaccttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgtcgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgcttcagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccaccggcctcgccatcaagcactccctcggccagggccacccggtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagcggcgacgtgggcaagagcttccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcgttccacggcgacaaggaccacggcggcgtgcacgacggcaccaccatcgtgctctgggagtgggccaagggcgacaaccagtgctggaagatcctcccctggggcgacgaggcctacgccggcggcagcgccaacgcaccccgcggcggcaacgagcccaccgtccgcatcttctgcaaggccgacgagggcttcagcgtcaccgtccgcggcggctccgtctgcctcgcccccaccaaccctcgcgacgagtaccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccccgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaaggcgaaggccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccctccacggcgacaaggaccacggcggcgtccgcgacggcaccaccgtcgcgctctggaagtggtgcgagggcgacaaccagcgctggaagatcgtcccctggtaa</cdnaseq>

Protein Sequence

<aaseq>MFGFGHHGHHGQDQPPQHHGGGGGGAHQPTFKIFCRADEGYCVA VREGNVVLAPTNPRDEHQHWYKDMRFSAKIKDEEGNPAFALVNKATGLAIKHSLGQGH PVKLAPFNPEYPDESVLWTESGDVGKSFRCIRMLNNIRLNFDAFHGDKDHGGVHDGTT IVLWEWAKGDNQCWKILPWGDEAYAGGSANAPRGGNEPTVRIFCKADEGFSVTVRGGS VCLAPTNPRDEYQHWIKDMRHSNSIKDEEGYPAFALVNRVTGEAIKHSQGEGHPVKLV PYNPGYQDESVLWTESRDVGHGFRCIRMVNNIYLNFDALHGDKDHGGVRDGTTVALWK WCEGDNQRWKIVPW</aaseq>

Gene Sequence

<dnaseqindica>1587..1588#1109..1337#493..999#75..383#atcgcctcgtctcacgtttgatccatcacactcacacaacacaaccctccccaaaacctcccgaagagagcaagatgttcggcttcgggcaccacggccaccatggccaagaccagccgccccagcaccacggcggcggcggcggcggcgcgcaccagcccaccttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgtcgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgcttcagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccaccggcctcgccatcaagcactccctcggccagggccacccggtacgcgcgtgccgtgagccatcttgatccgtggcgccgtcgccgtcggcgttggttttgctgactcactctttgtgtgatgcgtgcgtcgtggtggtggtggtttcaggtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagcggcgacgtgggcaagagcttccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcgttccacggcgacaaggaccacggcggcgtgcacgacggcaccaccatcgtgctctgggagtgggccaagggcgacaaccagtgctggaagatcctcccctggggcgacgaggcctacgccggcggcagcgccaacgcaccccgcggcggcaacgagcccaccgtccgcatcttctgcaaggccgacgagggcttcagcgtcaccgtccgcggcggctccgtctgcctcgcccccaccaaccctcgcgacgagtaccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccccgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaaggcgaaggccaccctgtaagcatccatcctcactactagtacatcgatctatccttcttgatttgcctgttaaaagtgatgaacaaatgccatggctgcttgtttgtttgatccgatcaaacaggtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccctccacggcgacaaggaccacggcggcgtccgcgacggcaccaccgtcgcgctctggaagtggtgcgagggcgacaaccagcgctggaagatcgtcccctggtgtaagctgcctcatcccaacatcgctcgctgcaacttgtttacgagcaccattatcaactttcttgatgaggagtagaaatttttgcacattgatttcacgtaaccgacagcaacaaggacgtcatagagtggccgatagcttacctgccatcttttgaattgttaaacttgctactagtactaatgatctcgccgaaaagaaaaaggctgatatgatgatgcgatctggttgttgcttatgtttgcagaaatgcggtgtgctggagctgcattggtcgtcgccgtgatctgtggagttgggagagtttgcgcccgtggcctgctgccctctgcctttgttgctagaataaaagtcgtgtgcgatgatcagtggtgatggtcttgtgtctgtgtccgtgtgtaatgcttttagtcgttttctcgagtcctgcttttgtgacaaaatgggggtgagaggagaggtgtcgtttccgtgaactatctcgaaggcgtttggccttgcagcttgttcttcagatgttcggagtttcagaccttttgatgagtaccctgctttatcatttatcagccatgtgtctagttcgatcaatatgcatcctttgaagtggcattggtttgtctttgaggatcaagatcctgtgcagttgttattgtaactgtaacttaagcagttacatgtgcatcacatgatctagaatggaaggccaggatgtgaagtggtactgtagcagagatgtactattatacctgtactgtagcagtcatctagagccactggatctgaaaacggatggccatgattgagtgcagttgctattgtgcagttacaatagcaactgcatttgatctcaatccgtcttggaggattaaggatttgattgctgtctgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0327600, RefSeq:Os03g0327600