Os10g0198100

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Revision as of 08:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0198100| Description = Conserved hypothetical protein| Version = NM_001070829.1 GI:115481401 GeneID:4348253| Length = 2445 bp| Definition ...")
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Gene Name

Os10g0198100

Description

Conserved hypothetical protein

Version

NM_001070829.1 GI:115481401 GeneID:4348253

Length

2445 bp

Definition

Oryza sativa Japonica Group Os10g0198100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:6518165..6520609

Sequence Coding Region

6518220..6518399,6518471..6518743,6518847..6519059,6520564..6520608

Expression

GEO Profiles:Os10g0198100

Genome Context

<gbrowseImage1> name=NC_008403:6518165..6520609 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:6518165..6520609 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcggtccatgttcgcggcggcgcggcggggtggttcgtctgcgagatcagtacaatctccttcactcctgcgatccgatcgcaagacgcgatcggatgtggatataatttgacagggattcagagaattaagatgaatggtgctttatggattcctattctgccccctccagttgttgatgctcgttatcagggactgtgcctacagtgtggccgccgcattaagggccgatctaacctctgttccatttcctgcagactattgcgggtgcataccggagctaggcgaggtatggctcaaaacctggtggaattttcagagtctgttggacagccgatccatcagctggatcagctctgtgggcaatgcctccggtccttttgtggtgtttcctgtccgaaccatctggtccacccacacccccagggtaatcatgctgcaggacctgatataattactattgagcgtttgaatggctggttggtcatagaccaagaacagctcccagtggaatttggccaagatattcatgtaatggttggagaggacgggcgtcacatgcttcctattaagcgcctccccgctgagcatggagatgggcatgatggattagtagagccagattggaatctttgtgctcgtgcagggtgtaatgagatgttcaatggaaatgctgtgtgttgctgcatgaggtgcttccatttactgtga</cdnaseq>

Protein Sequence

<aaseq>AVHVRGGAAGWFVCEISTISFTPAIRSQDAIGCGYNLTGIQRIK MNGALWIPILPPPVVDARYQGLCLQCGRRIKGRSNLCSISCRLLRVHTGARRGMAQNL VEFSESVGQPIHQLDQLCGQCLRSFCGVSCPNHLVHPHPQGNHAAGPDIITIERLNGW LVIDQEQLPVEFGQDIHVMVGEDGRHMLPIKRLPAEHGDGHDGLVEPDWNLCARAGCN EMFNGNAVCCCMRCFHLL</aaseq>

Gene Sequence

<dnaseqindica>2211..2390#1867..2139#1551..1763#2..46#ggcggtccatgttcgcggcggcgcggcggggtggttcgtctgcgaggtaatcttgcgccgcctcgccccgttcacccgcttgggccgcggggacgcagcccgcagccacgccaagcaacgcggagttcttggagttcttggggttcttggggttcttggagttcttggggtttttgggttcttggggttcttggagttcttggggttcttggggttcttggggttcttctgttagggttaggagttcttgagaagattaattaaaatgaggtttacagattacatattaggtgtgggaattatcagagagaaaaaaagagcaaaaagcagaacaaaccaaaacagaaaaagggagaatttacagatatatgtacatgtagcattcttctaggaaagccgtgagcaccaagattgaattttttgtttatttgtttcattggtccttaggctccagagctgtatgcatggtgtctgagacctgttgaatacttcattgtagactgtcaaattgtctttcgaacacccggttgttgcgtgctttccatagagtatatgcgcaggcagcaaaccaaactggctcaattcctttcagtgtttgatttctgttcataatttcctggaggaaggctgagatagaatctgagttgttggctagcggtagtaaattcaatttttcccagaggctattggcctgtctgcaccctctaagatgatgtggtcagctgtttctagcgcagggcacaaagagcagtgggggtcttcgttccagtttttgttgaccatattggctttggtgtttaatctgtccctgaatgccagccagaggaaaaccttgccgttttgtgggatggtgtggagccaaatataatttgctggaatccaaagtgacccatgaaaggacagcagacgataggcatttgctgttgagattttaggtaccgggtatgaaaactctcttgcgtctgttttgtctgggtaggggcggtggttttgcaggatttgcagcagtgcatgtagctctgactctgcttggtaggagaggtttggatggagctggatgttccaggaattttgcctgtattgcgattcaaccgtgcaatccttgtgtagtgcaaaagagaataaaactgggaatgcgaactctatgcgctggggtagccatttatctttccaaaagagggttgttttgccgttgccaagttttacctgggtcgtgtagcttagaatctggaattgtgactggatgagcttccaagtcggtgtatcactggccctggggtttagctgtattgcgttttgcagatatctttctctaaaccagatagccattggatcatcttctgcagagagtaccttgtttgctagttttaagagtaatgctgtgttatgcgttcttaagtccttgatccctaatccttgttgtttttgcagcagtagtcttccaggctactaggcagtgccctcaattttggtgattttatttcctgttagctctaacattcctgtttattcacttcttattgacagttcttgaccttttctatgtacagatcagtacaatctccttcactcctgcgatccgatcgcaagacgcgatcggatgtggatataatttgacagggattcagagaattaagatgaatggtgctttatggattcctattctgccccctccagttgttgatgctcgttatcagggactgtgcctacagtgtggccgccgcattaagggccgatctaacctctgttccatttcctgcagagtaattcctttctcttttttgttgctctgcttctgttgtattattgaggttacctcatttgcatgtcactaaaacgttgaataaatttaatgttgttatgcagctattgcgggtgcataccggagctaggcgaggtatggctcaaaacctggtggaattttcagagtctgttggacagccgatccatcagctggatcagctctgtgggcaatgcctccggtccttttgtggtgtttcctgtccgaaccatctggtccacccacacccccagggtaatcatgctgcaggacctgatataattactattgagcgtttgaatggctggttggtcatagaccaagaacagctcccagtggaatttggccaagatattcatgtgagtacttaatattgtaagtaaatagtttcctgtgttgttcgcgtaattacttctaaatgtgattccaggtaatggttggagaggacgggcgtcacatgcttcctattaagcgcctccccgctgagcatggagatgggcatgatggattagtagagccagattggaatctttgtgctcgtgcagggtgtaatgagatgttcaatggaaatgctgtgtgttgctgcatgaggtgcttccatttactgtgaggataccaagtggatgtgattaaataagtttaagaaatacccctgttttatgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0198100, RefSeq:Os10g0198100