Os03g0328200

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0328200| Description = Conserved hypothetical protein| Version = NM_001056535.2 GI:297600857 GeneID:4332720| Length = 3486 bp| Definition ...")
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Gene Name

Os03g0328200

Description

Conserved hypothetical protein

Version

NM_001056535.2 GI:297600857 GeneID:4332720

Length

3486 bp

Definition

Oryza sativa Japonica Group Os03g0328200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12063659..12067144

Sequence Coding Region

12063659..12063684,12065115..12065256,12065532..12066086,12066165..12066470,12066590..12067144

Expression

GEO Profiles:Os03g0328200

Genome Context

<gbrowseImage1> name=NC_008396:12063659..12067144 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12063659..12067144 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccagctacgggggcggctacaatggcaacgaaggcggcaaaggccacgatgacgacgtgtacggccacgacggctgcaccaaggacttccttgcgtccgggccttggtgcgcacgccgagggggcgcggtcggcgctgacgcggcgcatcccccgcctgattcctctagcggcaacacctcccgggtgcggttcgagtcgctcgacctcaacgacagcgacgggtggccagaaatggctacgtacgcgggcatgctgcaggccgacgacgacaacatcgaaattcctccaccgcccgttcaagttcctccccggcgaatatctcgcaccctcggaatccggcccactcgcagtgcggggggaggaggagtacaaggcgcggccgctggaggaggacgagcaggggccgcaagcgctggaggaggagtcgcaggcgcagtcgtcggaggaggaggcgtggccgtgagcgcacggcctgcatcacgcgcatcagtgtgccacaatgtctcggaccttgcggccgagcactccgatgctaacgacggtattccggttaggaaagataaggcaaattggtcagcgagaaatactcgcaccttctgttccatctggtgccatcaaatggacataggaaactgtgttcgcggtattatgcaaaaaaatggctggagggacatcattaagaggtacttccaagccactggtttagttcacaacagggagcaattcatggggagacacaggcagcttaggaagcaatgggcattctgtaataagcttcgctccagctctggcttagggaggaaccctgatgggactgttgtcgccgaagatgattggtgggctgccaacaccaagggacatcccgattggaagaagttcaggaaaggcttgcctgaatatttgcctgaaatggacagaatgtttgagggtgttgcagtggatggttctacatcctttgttgcgactgccgaccagcctgtagagtgtgacagctctgatgaagcggatgatgatgaggacgacgatgagctgactcctcttagtgtcgacaacaaaaggacaagcagcacgagcaccacagcctcgagtccaagtaagaagtctaggagtccagcagtgagggtaatggacagaaacatgagtgagtacaacgaaatttcaaggaacaaactcagtgtcctgcagaccatgatgcaagtaaagcaggatgctatgcaagaagaacgcaaagctattgagcggaaggtggcaaaggttaacgagctgggaaaggagtgtggggtaactccctctgagaccccaacattgttcatgggtgtcctcgaaatcatcaagtatcaaagtgtgatggacttgttcattgtcaccgagcctgaaggaaggatgctcatcatcaagaaatatgcaggggatgatgaccaatcaggttatgtagaggatgatgaccaatcaggttatgaggagtcgcgccgtcggcttaagcgttgggaggatgagatagacgagttgatcattgcattgatggatgatgatgacgacggttatgtgtacgcaacatcgcctatgaagcaagtttga</cdnaseq>

Protein Sequence

<aaseq>MASYGGGYNGNEGGKGHDDDVYGHDGCTKDFLASGPWCARRGGA VGADAAHPPPDSSSGNTSRVRFESLDLNDSDGWPEMATYAGMLQADDDNIEIPPPPVQ VPPRRISRTLGIRPTRSAGGGGVQGAAAGGGRAGAASAGGGVAGAVVGGGGVAVSARP ASRASVCHNVSDLAAEHSDANDGIPVRKDKANWSARNTRTFCSIWCHQMDIGNCVRGI MQKNGWRDIIKRYFQATGLVHNREQFMGRHRQLRKQWAFCNKLRSSSGLGRNPDGTVV AEDDWWAANTKGHPDWKKFRKGLPEYLPEMDRMFEGVAVDGSTSFVATADQPVECDSS DEADDDEDDDELTPLSVDNKRTSSTSTTASSPSKKSRSPAVRVMDRNMSEYNEISRNK LSVLQTMMQVKQDAMQEERKAIERKVAKVNELGKECGVTPSETPTLFMGVLEIIKYQS VMDLFIVTEPEGRMLIIKKYAGDDDQSGYVEDDDQSGYEESRRRLKRWEDEIDELIIA LMDDDDDGYVYATSPMKQV</aaseq>

Gene Sequence

<dnaseqindica>3461..3486#1889..2030#1059..1613#675..980#1..555#atggccagctacgggggcggctacaatggcaacgaaggcggcaaaggccacgatgacgacgtgtacggccacgacggctgcaccaaggacttccttgcgtccgggccttggtgcgcacgccgagggggcgcggtcggcgctgacgcggcgcatcccccgcctgattcctctagcggcaacacctcccgggtgcggttcgagtcgctcgacctcaacgacagcgacgggtggccagaaatggctacgtacgcgggcatgctgcaggccgacgacgacaacatcgaaattcctccaccgcccgttcaagttcctccccggcgaatatctcgcaccctcggaatccggcccactcgcagtgcggggggaggaggagtacaaggcgcggccgctggaggaggacgagcaggggccgcaagcgctggaggaggagtcgcaggcgcagtcgtcggaggaggaggcgtggccgtgagcgcacggcctgcatcacgcgcatcagtgtgccacaatgtctcggaccttgcggccgagcactccgatgctaacgacggtattccggtacgtacaacaattccaattacaattgattgcctgcttccgactagtttaaaattttgttaaatgcaaacttagttcacatgttcgatgttgttttccatgactattgatgcatttaggttaggaaagataaggcaaattggtcagcgagaaatactcgcaccttctgttccatctggtgccatcaaatggacataggaaactgtgttcgcggtattatgcaaaaaaatggctggagggacatcattaagaggtacttccaagccactggtttagttcacaacagggagcaattcatggggagacacaggcagcttaggaagcaatgggcattctgtaataagcttcgctccagctctggcttagggaggaaccctgatgggactgttgtcgccgaagatgattggtgggctgccaacaccaaggtaaattggtcatgtctctctaatgttgtgaacacatgttaagttcagcaggtcatgacatgtgctttcgttggacagggacatcccgattggaagaagttcaggaaaggcttgcctgaatatttgcctgaaatggacagaatgtttgagggtgttgcagtggatggttctacatcctttgttgcgactgccgaccagcctgtagagtgtgacagctctgatgaagcggatgatgatgaggacgacgatgagctgactcctcttagtgtcgacaacaaaaggacaagcagcacgagcaccacagcctcgagtccaagtaagaagtctaggagtccagcagtgagggtaatggacagaaacatgagtgagtacaacgaaatttcaaggaacaaactcagtgtcctgcagaccatgatgcaagtaaagcaggatgctatgcaagaagaacgcaaagctattgagcggaaggtggcaaaggttaacgagctgggaaaggagtgtggggtaactccctctgagaccccaacattgttcatgggtgtcctcgaaatcatcaagtatcaaagtgtgatggacttgttcattgtcaccgagcctgaaggaaggatgctcatcatcaagaaatatgcaggggtcgacaactagtccagctaatgttttgtcatggctatatttcctactttatgtactaatggccgtatgttcactcggatgtatggtgcatgtatttgtgtgtttggactatgttcccgatgtgtgttatttaaacatcagcatggtactactattgatgaattctatgtatgctgctgatttgaactatgtaatgcatggctgagaaagaaatgcatattaatcatgtctatatatttttcattgctaatattttgcattgcttgttttgacaggatgatgaccaatcaggttatgtagaggatgatgaccaatcaggttatgaggagtcgcgccgtcggcttaagcgttgggaggatgagatagacgagttgatcattgcattgatggatgatgatgacgacggttatgtgtacggtatgtacaagtatgccatgcacattgacaagcatttgactagagctgagtataggcaacctgccatgactggtttggaatgggtacataaaaaacttggggatagaaaggcctgttataacatgtttagaatgagtccaactatgttccttcgcctgcatgatctattggtacagtcgtatgagcttaaatctagtagcaagtcaacctcggttgaggcacttacgatgtttctttggatggttggtgccccacaatctgttagacaagctgaggacagatttgagaggtcaatggggactgtaagtaggctgtttaacaaagttttgcagtctgtcatcaagcttgccgttgatgtcataaagccggctgacccacaattcacaacaatgcatccaagactgaggaaccgtaggttctttccctacttcaaggattgcataggggctatagatgggactcatgtaccttgcgtggtgccaagtaacaagtttgtgcagcacttgtgccgcaagggcatgacaacacaaaatgtgatggctgtctgtgactttgacatgaggtttacatttgtactagctggatggccaggttcggtacatgacatgagagtatttgatgatgcccacacaacatacacccatgtgtttctacatccacctacaggtatatgcttgaatggtacttgttccttctttgttatttgaaatatgtcatactaactcatgtttgatgctgtagggaaatattaccttgtcgactctgggtaccctaaccggccaggttgccttgctccttacaagggaaccaagtatcatctttaggagtatcgcgatgcccctgaaccacaaggtaaggaagagaacttcaactatgcacactcatctcttaggaatgtcattgaaaggtcattggagttttgaaaatgaagtggaggatgttggagaagatccctagttatgatcctcgtaaacaggcacaaattatagttgcatgttgtgcgctacataacttcattaggaaaagtggcatacgtgacaagcacttcgatcgttgtgactgtgatgagaactatgtgccgccacaagctagtgacgatcaacctgagaccgaagaagtgtttgatgattgtgatctgatgaatgcatttcgtgattccattgcacttgctttggtacacggttcttgaattttgtttgtcatttggaacatgcgtatggactgtcatgtatgcggctgatgtgtatgtttgacaacttatttgtggatttctattgcttgcataattgttgactgcatttgtaatgtgctactgttatggaggatgtaagccaagagatttatgttgtatgtcagtatgtgtgtgacgtcgcatggcagctgtgtttgctgtaccatgcatgtatgccaaatttattatttgtttgtagcaacatcgcctatgaagcaagtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0328200, RefSeq:Os03g0328200