Os09g0258900

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Revision as of 07:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0258900| Description = Conserved hypothetical protein| Version = NM_001188809.1 GI:297726748 GeneID:9272316| Length = 5829 bp| Definition ...")
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Gene Name

Os09g0258900

Description

Conserved hypothetical protein

Version

NM_001188809.1 GI:297726748 GeneID:9272316

Length

5829 bp

Definition

Oryza sativa Japonica Group Os09g0258900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4976935..4982763

Sequence Coding Region

4976935..4976971,4978111..4978531,4978629..4979037,4979120..4979304,4980062..4980803
,4980968..4981039,4981136..4981270,4982605..4982763

Expression

GEO Profiles:Os09g0258900

Genome Context

<gbrowseImage1> name=NC_008402:4976935..4982763 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4976935..4982763 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacggtgacgaccaccttcttctccgtctcgggctccttctcggcgcgcttctcacgcttcggcggcggcgggcgtgtcgccgccgccgtggatcgcacgccggctcgtccttggacgacggcggcatctgcttcttctgctggtgagttgccactgggcacagagacagaatcaaatgaagactatgggatgttattcaggttatcacaggagggaggcatcacctatacaaatttattccagcaagtctctgtcttacctaatgcaattcttcctggtgctcaggtggcaggtggtcttcccttgctccaaaacacttgtggcagtttcatgcagctattgcaagctcctattgaatcagagactgctctatatttgacatccaatagatttgagtatgacaacaccttttggagtttcgattctcacaatggttatcaacaaaatgacctgcaaaatgcacaaacagatacctctcagatgtgcaactctttgccacaaagtgtagctgtgcatcctcctgtggcatcactggacatgctatatgatgaaatgcagaaatcaagtgctgatgttaataatcaagctgagatgtgcaggtcaatagtacaattgaaagcatcatctgtagaagtgatttataatgaaatgcagactcaaaccattgaggctgatgcctgttttgaccagcactttgagcaagcaacagaagaggatttattgtctaatcatgcaatagttacatttcagcaagttgaggaaatagaacaagataaaagtgcagaaaatccagatcaaaattttagtgaggaagatataaacatatttatggagaatgaaagtgtaacagctgttcagagaggtggtcaggaagctaacagtgcacatgtgccgtcaatcaacaaagtttttgctgatgagaatgaagcttttgacttctacaatggttatgtttatatggttggtttctctacatgcaaagctagcaattaccatagcaggaaaaccgatattgtgacaaggcacacattcaaatgcaacaggtggaggaaaccaagtgatccaaaggagaaggacctgcctgaggttgatgaagttgagaattacactgttcataggaattgcctgttccatatgttatcaaatgcaagggacaaaacaggaaggacattcaattcagaggatgaagaagtttacaaggatttccatgatattgttacaaaatcccagacagaggctgaatttgaatatttgtggaaagatttcataagaagaaagaatctgtataatacaacagcaaggagtgaggggatgaattcaaggtacaaagctgacatttgttcatctcatagtgtttctgcattcctagcacagtatgaaaggattgcagaaacaatttatgagtgcttcaaagaacaggaatcgctgactaggaatactgttctagatacttggtcagaatatcaatttgagaagcaagctgcaaaactgtatactaggaagatattttgggcatttcagcgtatcttgcaaagctataccaagtatgatgtgaccgtgaaagtgcgcgattctatttttgaggtgtacaaatcagagattcatgcactgcaggattttagaaaaaggaagtatattgtggttgttgatactatagctgaagaatatgaatgtatctgttcaagatttaagaaggatgacaagaaccaagaattatttgtgccaaacacattgatgcctgctgctgttcttgaaagcaaccctttactcaggttcaacatcttgtcacagaaaatgattaagttggcttcagatgcatcaaaaacaaaagaaaagtttgtatatgtgatgaatgaaagtgacaagattgaagatgggttgaaggcaatgagtgacacagctcctaatgatgctactgttcatgttcaggatgcggcggcgacaacttgtggtgtagcttctgttggtgctcaaactggtataccgatgggtcctagtggtgttggtattgatgctgagagcacaaagggtgcggttgctgaaactgaaacaacagatatggttggaattgcttctacttctgttttgctggatccaaaatgctctaatagcaaaggcagtgcatccttgggttccaccattccatacacttcatag</cdnaseq>

Protein Sequence

<aaseq>MTVTTTFFSVSGSFSARFSRFGGGGRVAAAVDRTPARPWTTAAS ASSAGELPLGTETESNEDYGMLFRLSQEGGITYTNLFQQVSVLPNAILPGAQVAGGLP LLQNTCGSFMQLLQAPIESETALYLTSNRFEYDNTFWSFDSHNGYQQNDLQNAQTDTS QMCNSLPQSVAVHPPVASLDMLYDEMQKSSADVNNQAEMCRSIVQLKASSVEVIYNEM QTQTIEADACFDQHFEQATEEDLLSNHAIVTFQQVEEIEQDKSAENPDQNFSEEDINI FMENESVTAVQRGGQEANSAHVPSINKVFADENEAFDFYNGYVYMVGFSTCKASNYHS RKTDIVTRHTFKCNRWRKPSDPKEKDLPEVDEVENYTVHRNCLFHMLSNARDKTGRTF NSEDEEVYKDFHDIVTKSQTEAEFEYLWKDFIRRKNLYNTTARSEGMNSRYKADICSS HSVSAFLAQYERIAETIYECFKEQESLTRNTVLDTWSEYQFEKQAAKLYTRKIFWAFQ RILQSYTKYDVTVKVRDSIFEVYKSEIHALQDFRKRKYIVVVDTIAEEYECICSRFKK DDKNQELFVPNTLMPAAVLESNPLLRFNILSQKMIKLASDASKTKEKFVYVMNESDKI EDGLKAMSDTAPNDATVHVQDAAATTCGVASVGAQTGIPMGPSGVGIDAESTKGAVAE TETTDMVGIASTSVLLDPKCSNSKGSASLGSTIPYTS</aaseq>

Gene Sequence

<dnaseqindica>5793..5829#4233..4653#3727..4135#3460..3644#1961..2702#1725..1796#1494..1628#1..159#atgacggtgacgaccaccttcttctccgtctcgggctccttctcggcgcgcttctcacgcttcggcggcggcgggcgtgtcgccgccgccgtggatcgcacgccggctcgtccttggacgacggcggcatctgcttcttctgctggtgagttgccactggtttcatgcttgtgatgaaacgtccaattggtaattgctagttgcaatgaagctaggcgtgggtgtggctgaatatctttatgtttacctattataaaaagggaccgcctattctgcagtcgattgcaatttttacgtttgatcagtcaactttgtgcaccattagatatgtatctaatggtaaagctcaaaaaaattaaaacgtgacgtgcaaaaaagatcacaatctggtgcagatgtttgggcccaaaaactaacaaaaagcccaaagcccaaagttggttaaaacacacttttgggtccaaaaacttacaaaagcccaatatttgggccccagttttttgtgctgtgttatgggccagcgaaggtatgggccggagtctttttgggttgtaattcagtgagtctggattttcagttttttagctgtgatttgggcttttttcaacaaaacaattgggctctcacatgatacccgttttgggctttttagctccgatttgggttctgtcacaaaaatggtccactccctggttccttaaaaaaatgtcttgtgctccaagatagaaactcagatcaaaacttagatccaaaagaaaaacgagaggagagatcaaaactcagattggaaaagcaaaaaggagaaagggagagaaagaacacgaagaagaagaaataacgtgtgctcgggggggacagtaagaacctgagaaatttttacttcacggaggtttttctctttgttctttgttcccacctccctccttttcacctcttcctcccatcttttgatttttatttgctttctcttccctttccaccactcccttcctctgaagaacaacgtgtgttgaggaaagaacaggaagaacttggaggaaatttacttgatggaggtttttttttctgtgttccctctctctagtttaacctcttcttcctttctctctctttttttttttgcttttcttccctttccattgtccctgcgttttctgctgcttccctacgcaaaactttattatataaaaactcataagcaacacaatattgatctggtctattttttcatgtggttgtaatgcaatactgcaatcaactatagcaaatcttgtgcagagtgtctgcttttccttatgcacaatagggtgactgaatttctaatagtgcacaactcagaatatcttgattcactaactgttaaaactgctctggttcaagtagttgttctcttgtggtcattctttgaattatgggagctctctgtccatgcaatgccattacattgtacaaaggatgtaatgtcattttttttcatctatccaaatgtacagggcacagagacagaatcaaatgaagactatgggatgttattcaggttatcacaggagggaggcatcacctatacaaatttattccagcaagtctctgtcttacctaatgcaattcttcctggtgctcaggtggcagtgagtagaaataaaacacatattaaatgaaaatgtttaaactaaaactttatgtgcacagtcataacccccactgtatttttttttgcaaaacagggtggtcttcccttgctccaaaacacttgtggcagtttcatgcagctattgcaagctcctattgaatcagaggtgtgttccctcttgtttatttgatttgtgctgtgccatcccattatttgattaaaaacatattcatgattgatgtggatatagctaatatggataaaagttcaaatcaaaatagaattataaaaaggtctctttattagaatttttttttcttaccattgcagactgctctatatttgacatccaatagatttgagtatgacaacaccttttggagtttcgattctcacaatggttatcaacaaaatgacctgcaaaatgcacaaacagatacctctcagatgtgcaactctttgccacaaagtgtagctgtgcatcctcctgtggcatcactggacatgctatatgatgaaatgcagaaatcaagtgctgatgttaataatcaagctgagatgtgcaggtcaatagtacaattgaaagcatcatctgtagaagtgatttataatgaaatgcagactcaaaccattgaggctgatgcctgttttgaccagcactttgagcaagcaacagaagaggatttattgtctaatcatgcaatagttacatttcagcaagttgaggaaatagaacaagataaaagtgcagaaaatccagatcaaaattttagtgaggaagatataaacatatttatggagaatgaaagtgtaacagctgttcagagaggtggtcaggaagctaacagtgcacatgtgccgtcaatcaacaaagtttttgctgatgagaatgaagcttttgacttctacaatggttatgtttatatggttggtttctctacatgcaaagctagcaattaccatagcaggaaaaccgatattgtgacaaggcacacattcaaatgcaacaggtggaggaaaccaagtgatccaaaggagaaggacctgcctgaggttgatgaagttgagaattgtctgcaaataaacacaacaaatccattaggaaaaaaaaagaaaacagaacaaagtggtttacacaaattgcaaagctgagatggtgataacattgaagaggggcttttggtacattacaaggcttaatctagagcacaatcatccactatctccaccagaagaaagaaaattcctaaggtctcacaaacatatgacagatcaggagaaacttttgataagaactctgaacaaaatcaatgtgcccacaaggatgattatgtctgttttgtcatatgttaggggtggcttgtctgcagttccttacacaaaaaaggctgtgagcaattatagagattgtactagaagagaaagtgggaaaaatgacatgatgcagtgtttggatttttttgagaagaaaagatcagaggatccattgttttatttcagattcagaactgatgagaacaatgttgtgaagagtctattttggtccgatgggaacatcagaaaattttatgagatgtttggtgacataattagttttgacacgacgtacaagaccaataggtgtgatttgccctttgctccatttgtagggataactagtcatggtgacaattgcctatttggttatgcattcctacaagacgaaacaagtgagacttttcagtggttgttcaatacgttccttgattgtatgggtggcaaggctcctgctactattataactgatcaagacttggcaatgaaagctgctattgccatagtttttccagacactgttcataggaattgcctgttccatatgttatcaaatgcaagggacaaaacaggaaggacattcaattcagaggatgaagaagtttacaaggatttccatgatattgttacaaaatcccagacagaggctgaatttgaatatttgtggaaagatttcataagaagaaagaatctgtataatgttaggtatttttagcttgtgggtcactagaaagagatgggcaccagtttacttcaaaagcaattggtgccctttgattcagacaacagcaaggagtgaggggatgaattcaaggtacaaagctgacatttgttcatctcatagtgtttctgcattcctagcacagtatgaaaggattgcagaaacaatttatgagtgcttcaaagaacaggaatcgctgactaggaatactgttctagatacttggtcagaatatcaatttgagaagcaagctgcaaaactgtatactaggaagatattttgggcatttcagcgtatcttgcaaagctataccaagtatgatgtgaccgtgaaagtgcgcgattctatttttgaggtgtacaaatcagagattcatgcactgcaggattttagaaaaaggaagtatattgtggttgttgatactatagctgaagaatatgaatgtatctgttcaagatttaagaaggatggtattttgtgtgttcatgtgctcaaagtactcattcacttgaacataacaaaactacctgataaaataatattttattgaaagatggaggctgaaagacaagaaccaagaattatttgtgccaaacacattgatgcctgctgctgttcttgaaagcaaccctttactcaggttcaacatcttgtcacagaaaatgattaagttggcttcagatgcatcaaaaacaaaagaaaagtttgtatatgtgatgaatgaaagtgacaagattgaagatgggttgaaggcaatgagtgacacagctcctaatgatgctactgttcatgttcaggatgcggcggcgacaacttgtggtgtagcttctgttggtgctcaaactggtataccgatgggtcctagtggtgttggtattgatgctgagagcacaaagggtgcggttgctgaaactgaaacaacagatatggttggaattgcttctacttctgttttgctggatccaaaatgctctaatagcaaaggcaggtacaagagtgagccaagaaaaaagaggctgatagatgtgattagaagcaagggttcagtgacatgtagtggttgtgggtcccatgaccataacattcggacttgtcccaaaaaaagagaagtcaaatgcaacagaagtgatgaaggagaggaaatctagagaactttagggacataaaactctttgggtagcaaaaaaatgactggcctatgtcttatgagtagaaacatcaagaaaaatggcattccacagtatgtttttacccccttttgtttgtgtgttttttggatggtgcaaatacagttacatggttggctttgcaggcataactgattgttaaaaagaaagaattgcttgtgtgaaaaatggcataccgtagtttgtcttcacttccttctgttgtatttaacgtatatctgtcctcccctcactccctaccccccccccaccccccaaaaaaacaattgaacctgaacacagttaaaaagagaaaaagtatctctcatcagatatctctcatcagtgagacgatcagtatcatgtaaaacacataaagaaatcctaaaaaaatacaggtccttttttaatatttgggtgttatgatattggatttatcatatctagtacaggaattaagctccacatagaaaacacatagcacaaaattttgctaacacatatcctagagtttagaactcagctgtagcacatagaacacaagcaaagcacaaagtgttcgtatatataagtgtatcttgcatttgtgcaccaaaacaaaactgaaactgtatgttactagatagtatttttttcaacaagttgaggactcacataaacccaaactgcatgggcttgaaaaaacagaaaatatgacatctctctctcttactaccaggtagtgtgtggccccatctcatgggctttacagaaaaaacaggattgtgtaatctgttggtacacaaacaaaaacaggagtttatttcactgttgccttgcgtattttccatgctttgttggattgaagcttctagatagcatttttgcttcttcttgtgaattgtgttctgagaacaataggtcatttgcaatttgcttcctcatgtttgggatatattctggtctgatcatatctttcaagtgcatccttgggttccaccattccatacacttcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0258900, RefSeq:Os09g0258900