Os03g0330200

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0330200| Description = Similar to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-indepe...")
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Gene Name

Os03g0330200

Description

Similar to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)

Version

NM_001056543.2 GI:297600863 GeneID:4332728

Length

4335 bp

Definition

Oryza sativa Japonica Group Os03g0330200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12196532..12200866

Sequence Coding Region

12196532..12196690,12196783..12196910,12198405..12198555,12198663..12198845,12199358..12199782
,12199875..12200067,12200214..12200309,12200445..12200600,12200702..12200866

Expression

GEO Profiles:Os03g0330200

Genome Context

<gbrowseImage1> name=NC_008396:12196532..12200866 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12196532..12200866 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagacgaggcggtgggagctggcggctcaccggaggctggagaaggggaaggtggtgggcgtggtggtgctggacggctggggcgaggcggcgccggataccttcaactgcatccacgtcgccgacaccccaaccctcgacgccctcaagaagggtggtccggagaggtggagggtgatcaaggctcacgggacggcggtggggctgcctacggacgacgacatgggcaacagtgaggttggccacaacgcgcttggagcaggccagatatatgcccagggtgcaaaactggtagatatggcgctagcctctggaaagatatacgagggggaaggttttaagtacatccaacagtccttcgagaacggtactttgcacctcattggcttgctcagcgatggaggagtacattcaaggattgatcagctgcagctgcttctaaaaggagccagtgagcatggagcgaaaaggatacgggttcatatacttacagatggccgtgatgtgttggacggtagcagtgtcaagtttgtggaattgattgagaatgaccttgctaaattacgggataagggtgtggatgcaagaattgcatctggtggtggcaggatgtataatgactggcaagttgtgaagcgtggttgggatgcacaggttctcggtgaagcgccacataagtttcaaaacgcccttgaagctgtgaagaagctcagggaggatccaaaggccaatgaccagtatttaccgccatttgttatagttgacgaaagaggaagaccgattggccctataatggatggggatgctgttgtgacatttaatttcagagcagaccggatggtcatgcttgcaaaggcactagaatacgagagttttgacaaatttgatcgtgtcaggttccccaagattcgctatgccggtatgcttcagtacgacggtgagctaaaacttccgagccattttcttgttgctcccccagagatagagagaacgtctggcgaatacttagcgcgcaatggcatacgcacatatgcttgcagtgagacagtcaaatttggtcacgtcacttttttctggaatggaaaccggtctggctacttccacccaaacctggaaaaatacgaagaaattccaagtgacattggtatccccttcaatgaacagccaaaaatgaaggccgtggaaattgcgaagaagacaagggatgccatcctgagtcgcaaatttgatcaggtaagggtaaacatcgcaaatggagatatggttggtcacacaggcgacattgaagctactatcgttgggtgcaaggcagctgatgaagctgttaagattgttctcgatgcgatagaacaagtaggtggcattttcgtggtcaccgcagaccatggcaatgcggaggacatggtgaaaagagataaatctggcaaaccgcttcgcgacaaggatggaaatgtccagcccctcacctcacacactttgaatccagttcccatcgccattggaggccctgggcttcaaccaggggtaagatttcggtcagatctccccagtgccggccttgccaacgttgcggcaacagtcatgaatcttcatggcttcgaggccccagatcactatgagcctacgctgatcgaagttgtcgacaaatga</cdnaseq>

Protein Sequence

<aaseq>MAETRRWELAAHRRLEKGKVVGVVVLDGWGEAAPDTFNCIHVAD TPTLDALKKGGPERWRVIKAHGTAVGLPTDDDMGNSEVGHNALGAGQIYAQGAKLVDM ALASGKIYEGEGFKYIQQSFENGTLHLIGLLSDGGVHSRIDQLQLLLKGASEHGAKRI RVHILTDGRDVLDGSSVKFVELIENDLAKLRDKGVDARIASGGGRMYNDWQVVKRGWD AQVLGEAPHKFQNALEAVKKLREDPKANDQYLPPFVIVDERGRPIGPIMDGDAVVTFN FRADRMVMLAKALEYESFDKFDRVRFPKIRYAGMLQYDGELKLPSHFLVAPPEIERTS GEYLARNGIRTYACSETVKFGHVTFFWNGNRSGYFHPNLEKYEEIPSDIGIPFNEQPK MKAVEIAKKTRDAILSRKFDQVRVNIANGDMVGHTGDIEATIVGCKAADEAVKIVLDA IEQVGGIFVVTADHGNAEDMVKRDKSGKPLRDKDGNVQPLTSHTLNPVPIAIGGPGLQ PGVRFRSDLPSAGLANVAATVMNLHGFEAPDHYEPTLIEVVDK</aaseq>

Gene Sequence

<dnaseqindica>1..159#252..379#1874..2024#2132..2314#2827..3251#3344..3536#3683..3778#3914..4069#4171..4335#atggcggagacgaggcggtgggagctggcggctcaccggaggctggagaaggggaaggtggtgggcgtggtggtgctggacggctggggcgaggcggcgccggataccttcaactgcatccacgtcgccgacaccccaaccctcgacgccctcaagaaggtagtaacaacgctaacaagacgtttgtttgatgcttcccatgatgatcagctgagagcgagacttgtgtgtgtgttttctggcgcgtgcagggtggtccggagaggtggagggtgatcaaggctcacgggacggcggtggggctgcctacggacgacgacatgggcaacagtgaggttggccacaacgcgcttggagcaggccagatatatgcccaggggtaatactagttttagggcccctttgaattggaggaaaaacatataaaaattttagaggattttaattctataggaaatatagaatttcctatgaagccctttgaaacaaaggattgaatcatatccaatcctttgaaattcctatggaatggacaatcttatagagattttggagaaaatttagcaagagcttcaatcttttggtaactttcctttgagtctatctctctcatccaattcctgcgtttttcctgcggttcaatcaaacggtcattcctgtgtttttcctgcgttttgcaatcctctgttttccacttacatttctatcaaaatcctacgtttttcctattcctacgttttttttcaatcctgcgattcaaaggggccctttactgtactagtatagtagcatagcagcaatctctgcttgatttctggttttctgcatgtacctgcaattctgttactctgcatattactccctcgatgctaaaatataagcgattttagataaatagaacatattctaatattatgaatctagatagtagagtccgttcagattcatagtattaggatatgttccatgcatccataaaaaataccttatatttggaacggagggagtagtatatacaccagaaaaatgcatgttgggttgttcaggctaactagatactccctctatcctataataatttcatttttcgtgctttccgtttgtactaaaataataagttcattatttagcgatcacggagtttataaaattaggggataaatatattaggagtagatgaagtagaaaataattgcattgagatttgataaagtaagagtattatagtttatttttgtttttttattgatatatgtgcgatagatgaaaaatgaaagacggatgaagtagaacgtaatttacttttcaacctgctgtaaatatcttctgaagtaaggcttgttcatttaagatggttaatgtctctaattctctaggtgcacattcacaccctccagtgacagtatgtagtaatgcagcccagttgcacagggacctagctgttgaatgctgaatcttaactcttttattatgaataattttatctcactactcttcttcctggacaagtctctctgttttaaaatataagatgtattagacttttacagggtctccaatattatactttgaccgtttatgtaaaaatatgtatattttgaccattgatttctttcataatttgttatcaataactatgaaattaatatcagatggaaatatttgaaatatgaatctaatgtcaaaattttcaatgttgaatttccgaatcacaaggagtcttatattttagaacagaggagtactatcatgcgtgagtatgaccagctttaatcaccttaacctgattgttccaaaaactacggtagcatggatgagtgttgcatgcacatctcaaatgccaagttactgatcagttgctgacaatgcgcagtgcaaaactggtagatatggcgctagcctctggaaagatatacgagggggaaggttttaagtacatccaacagtccttcgagaacggtactttgcacctcattggcttgctcagcgatggaggagtacattcaaggattgatcagctgcaggttgatataattaaatttcaaacttcatccgtcgatcagttgtagttgagtagtagtacaactatctcagtttctcttgttaatgttcttttggtgggctcttgcagctgcttctaaaaggagccagtgagcatggagcgaaaaggatacgggttcatatacttacagatggccgtgatgtgttggacggtagcagtgtcaagtttgtggaattgattgagaatgaccttgctaaattacgggataagggtgtggatgcaagaattgcatctggtggtggcaggatgtatgtcacgatggaccgttatgaggtattttctccgtttcatattataaatcgttttgactattttataaatcaaacttctttaactttaaccaaatttatagagaaatataacaatatttttaacataaaataaagaaactatcaaaatatattcaatgttggatctaatagtttacacaaaaaaatgttggatctaaaataactaatttagtgctataaatattactatatttttctataagcttggtcaaatttcaagagatttgactttaaaaaagtcaaaacaacttataatatgataacggagggagtatgtgtcaagcatttgaattcagagttcagttactactccgggaactcattatatcttaccacttatgttgcatatgctagctgcatttcttaacataagaggttgtccgaagctagctgctcaatacttgccttttgtaatgtcatggcacaattttctctgcgccaaaaatatgattgaaattttcactggttctgcagaatgactggcaagttgtgaagcgtggttgggatgcacaggttctcggtgaagcgccacataagtttcaaaacgcccttgaagctgtgaagaagctcagggaggatccaaaggccaatgaccagtatttaccgccatttgttatagttgacgaaagaggaagaccgattggccctataatggatggggatgctgttgtgacatttaatttcagagcagaccggatggtcatgcttgcaaaggcactagaatacgagagttttgacaaatttgatcgtgtcaggttccccaagattcgctatgccggtatgcttcagtacgacggtgagctaaaacttccgagccattttcttgttgctcccccagagatagagagaacgtctggcgaatacttagcgcgcaatggcatacgcacatatgcttgcaggtacaatactgttcattatcttgtcgaaagtgtttgctctgagtgttggtacttgagcatgcagcttcatatcttgtcattctaattttcagtgagacagtcaaatttggtcacgtcacttttttctggaatggaaaccggtctggctacttccacccaaacctggaaaaatacgaagaaattccaagtgacattggtatccccttcaatgaacagccaaaaatgaaggccgtggaaattgcgaagaagacaagggatgccatcctgagtcgcaaatttgatcaggtatttaacaaataaattccttcagaagaacgaacaaagagctcataggccatgcatcgggtagacttcagatagatagggcgtgataattgttactagcagctaatccacttaataggcctaatgttattttggtcatttgttaggtaagggtaaacatcgcaaatggagatatggttggtcacacaggcgacattgaagctactatcgttgggtgcaaggcagctgatgaagctgttaaggtgatcatgtctgcagtgctctctctcttttcagtcttttaacaattgataggccaccaattcaccattcagtcttgtatgcatgattttcactgtttgaaaatactcatggtggaccggaattctcttattcagattgttctcgatgcgatagaacaagtaggtggcattttcgtggtcaccgcagaccatggcaatgcggaggacatggtgaaaagagataaatctggcaaaccgcttcgcgacaaggatggaaatgtccagcccctcacctcacacactttgaatccagtaggctcacttccagatctgctttgctttgcaatacaccgtgttaacaatattaggatgcagttgctgtttaggacctcactttctgaaaccatctgcaggttcccatcgccattggaggccctgggcttcaaccaggggtaagatttcggtcagatctccccagtgccggccttgccaacgttgcggcaacagtcatgaatcttcatggcttcgaggccccagatcactatgagcctacgctgatcgaagttgtcgacaaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0330200, RefSeq:Os03g0330200