Os03g0333000

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0333000| Description = Conserved hypothetical protein| Version = NM_001056555.1 GI:115452838 GeneID:4332741| Length = 4913 bp| Definition ...")
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Gene Name

Os03g0333000

Description

Conserved hypothetical protein

Version

NM_001056555.1 GI:115452838 GeneID:4332741

Length

4913 bp

Definition

Oryza sativa Japonica Group Os03g0333000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12342592..12347504

Sequence Coding Region

12342924..12343340,12343699..12343836,12344162..12344221,12344332..12344394,12344956..12345018
,12345195..12345257,12345851..12345913,12346448..12346855

Expression

GEO Profiles:Os03g0333000

Genome Context

<gbrowseImage1> name=NC_008396:12342592..12347504 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12342592..12347504 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgctaaaaagaagaggaacaagaagaagaaggggaaccaagggaagaacactggtgatgtaacgtccagcactgcagaggctgccattcggtcccacaatcatgagacagcccctaatgaccatcataatggcactgatgctgatgatgcaatgtccactgttggagaggaagctcctcagtaccagaatcatgagccagatcgacaggcaaatcatgatagcacaaacactgatgatgtcatgtcctctgttggagaggggattccatttcagaaccttgaccctgccatgacacatgaaaatcacaaagtcagtagtacagcccatgctgatcagaggagtgttgagatgtcagattccaccgtggagcttgacatgcacagactatatgaagcaaagcttgataaattacatgatacgataaagaagttggaagatgagaagagtttgtggcatcaaaaaatgagctccatggagattgaggttgaaaagttgcataacaaagtggattatcatgcacagaatgaggtccgtttggaggaaaagctcaataatttacagaatgggtatgatgtgctgattaagaaggaggtagctttggataacaaagtcaggtccatagaggtcatcaatgatgccttaactcatcaggagacgtctcttaaagagagattaagtggactggaggagacaaataaagtactgcttgtacaggtgaaggtgctggaggaagcttcaaacaatactgttgaggaaagccagaggttggtaaaaggttttgatgaactggcatcaagattaggagtctttgaagcaaagtctgctcttactgaagcctccgtgactaaaaagggtaatgaactgattgttgatagaagtgtaaacagttctgcagcaattacttctgtggataactatagtccaatcaacagcagtcctagcaacgcctatgttagtaatcatctagaagaagctccaatgcaacttccagaaacaacaatcaatgatgtttcttccgagggcctcattgacatgaatgcacatcaaaggtcaaagcaagattttgatgaaccaagaacaagcgaagaaattctgccagttgcattagatgatatacagattcatgaggaagacccacaaccaccggtagccgatgatgaggcagaggaggttccattttctgatgctccaatcgtcggtgctccattccggttgatttcattcgttgctaggtatgtcagtggtgctgatttggtgaaccagaagtaa</cdnaseq>

Protein Sequence

<aaseq>MDAKKKRNKKKKGNQGKNTGDVTSSTAEAAIRSHNHETAPNDHH NGTDADDAMSTVGEEAPQYQNHEPDRQANHDSTNTDDVMSSVGEGIPFQNLDPAMTHE NHKVSSTAHADQRSVEMSDSTVELDMHRLYEAKLDKLHDTIKKLEDEKSLWHQKMSSM EIEVEKLHNKVDYHAQNEVRLEEKLNNLQNGYDVLIKKEVALDNKVRSIEVINDALTH QETSLKERLSGLEETNKVLLVQVKVLEEASNNTVEESQRLVKGFDELASRLGVFEAKS ALTEASVTKKGNELIVDRSVNSSAAITSVDNYSPINSSPSNAYVSNHLEEAPMQLPET TINDVSSEGLIDMNAHQRSKQDFDEPRTSEEILPVALDDIQIHEEDPQPPVADDEAEE VPFSDAPIVGAPFRLISFVARYVSGADLVNQK</aaseq>

Gene Sequence

<dnaseqindica>4165..4581#3669..3806#3284..3343#3111..3173#2487..2549#2248..2310#1592..1654#650..1057#gcgacaaagccaccggcagttacgcctccgcgctcctccttcccaagagacgcagatctccaccccgcgctcgcctcgcttcccccaaaaagtcttctcgtgagagctttcccccccctcctccacccaacaaatccccagcctcccagattcgtggcggaggctgcggcctgcggctgttctagggttagctctcgctccgccggcatttctcggtattttttctaactagtcttgtttagggcagcgcccctccgtaaatttttatagcggttgagttttctgggtagatgctttgttgatatagaatggacatggttccggttgtctgtagcgcgtggattcccagctagaatttctggccttatgttggcgtcagttcaataaaatggaatgtttactttaatgtgcttatcgtagagatatcagatatgttttagttgcaaatgattttttttatttatgattttgggagctaaaactggtgcacaaactttttttttgtcagtaatagattggctatccgtctctagaacatgacatttacctgatgaaacagctaatctgttaaatgtggttgtaagttgatatcttttgttgtattagtaggtagataaagtattgtaagggcttgggtttgcaaccggagatggatgctaaaaagaagaggaacaagaagaagaaggggaaccaagggaagaacactggtgatgtaacgtccagcactgcagaggctgccattcggtcccacaatcatgagacagcccctaatgaccatcataatggcactgatgctgatgatgcaatgtccactgttggagaggaagctcctcagtaccagaatcatgagccagatcgacaggcaaatcatgatagcacaaacactgatgatgtcatgtcctctgttggagaggggattccatttcagaaccttgaccctgccatgacacatgaaaatcacaaagtcagtagtacagcccatgctgatcagaggagtgttgagatgtcagattccaccgtggagcttgacatgcacagactatatgaagcaaagcttgtaagtatctgtaaattattagattataaatttaccgtattcttatgcaaagttcgtagcttacaaagcttagtggaagcagcttttcctaccacttgaattgacagtgtattttttgcattagattctttaccgtgcaacaatacattagtaggtttgacattaatgctaaaagttggcaatgtgaattttcttttgggaatgcaaaaaaaagggtgctctgatatcacttgggcatgcttccatgttgttggattagtttcacgtgcagccataatcacccatacagtgagcaaagaccatataggtgtcattttttctcccccttgcccatatttttctcatcattcccacctcttgtattcttagtctcctccctgcatttgtccggttgcattgcaaccacttcactgttcttcctatcacccattcttagccacctaccatgtgccaatagttgagctcgtcactgccttacctgctgtcatgtttctcaattatgtcatcttttaacctcagatattgccaatgcaggataaattacatgatacgataaagaagttggaagatgagaagagtttgtggcatcaaaaaatggtttgtatctggctatcggcacttgtggttgacatacatagcactcatttgtatttatagtatataccattgctgttggccaattggtctgaaacatatttttggtaccttagtacaataaaataacatgtatagaatttaaatatctccataccaacctactttcactttttttcctaactacgaggcatgtcttgacaccacaaatttttatttgataataattcatggtccaacactcagtcttcatgtgctgataaacagaaacgagaagatatgtgtgaaacaatgttagattaacttctccgagttctaacagttttatcctgtgatttgtgctttgccgaatgaagcatttttgtttcatctattcatttcctcaatcaggcatctccatttgttgataatgacatttgctgttttgcatgttaaagacttaagttacaaattataatacatgtttggtacattattttgtgtccatatgtttatatctttggatcaaatggtttgttgcaaaatgtgaacaaatgctattttggccatcatagaaatgtcatgtaagaaatattttctcattctttttcctgcagagctccatggagattgaggttgaaaagttgcataacaaagtggattatcatgcacagaatgaggtatgtttatgccctggaatcctggatgcaaccacatgcaattcattcaaccaatatagctagaaaaactaccttactcttcatacccaagattttctgccatgtcacaaagtgaatggacaggtgatatgaattaaaaatctagctaaaatgttgtcttgtgatccaatctctaggtccgtttggaggaaaagctcaataatttacagaatgggtatgatgtgctgattaagaaggaggtatatatttatttattctaatgatttctttgctcgtgtgggtagacataccagtcctgcctatatgcaggagttctgaattttgcagattaattttagttccaatttgtgtttttatgcctctatgaacaacaaattatgtcgtcttcactatgatacttcacagctaagtctcaccaagtatgtctggcatttcattcatggccacagttgtgtcctgtcacacttccaaacttgccacaagggtgggtaactaataattgtgaaaaaaagatgtggcttccacacttcttttgccaaagtgtggtcagaaacaaacatttctgatagtaagcacctctttcatttcacttgatactatagaacccaaagtgtctgtatttttctttttgttgttacattaacttccccctgatatttgaagtgtcttagcccctcatgtgggaactggaagtacgtcaggcttaaatcttgttataactgttaaacaccgctgtgctccttttgttgttatctattcgtggcttcatcctgtaaattttgttctctgacttcattcaggtagctttggataacaaagtcaggtccatagaggtcatcaatgatgccttaactcatcaggaggtaatgcatgaatcacttgttctgttacaatttttatttagtatttgcagcaaatgcatccaaagcccttcctatctgtttttggctgacatgttgctccttttcttcagacgtctcttaaagagagattaagtggactggaggagacaaataaagtactgcttgtacaggtatgaactacaaatccaactatttgtgtttttttttctttgtagttaatgtttgatatcccgttaagattcaagcaagcaaatgattagttaaatactaagattgataggttgttgtgtattatgtaatctgcaacatgtggccaaatatttgtcctctccagaaaggtgttcaatcatatgtaaagttaaaagtcatgatttattcgtgacgattttgaatatgtcggatttaaagctttggtgctttggttttcatttgcagcattagacatagttctgcttatatcatctgatattactatttaataacaaagtctggcaggtgaaggtgctggaggaagcttcaaacaatactgttgaggaaagccagaggttggtaaaaggttttgatgaactggcatcaagattaggagtctttgaagcaaagtctgctcttactgaagcctccgtgactaaaaaggtaaatgttatgcagaacattcctttttgtcacctgtgtccaatttggtagacgctatacactccagtggatctgcctggggagaaataccacttgatatcagtagtctcttctctcttgtgcataaaacacttgtccttccagattctagtgcataagatagagacatgataattgaggtctttgaaaataatgtgatggattaaacggatttgaccagcacagttctcaatgagcagactgttggttttggtaagaagtacgagtctccgcatgcagtgtgacagaatatcaaatgtctggaaaccgccagaattcatatatacttgtatacagcgtaattgttttctgcttgcagggtaatgaactgattgttgatagaagtgtaaacagttctgcagcaattacttctgtggataactatagtccaatcaacagcagtcctagcaacgcctatgttagtaatcatctagaagaagctccaatgcaacttccagaaacaacaatcaatgatgtttcttccgagggcctcattgacatgaatgcacatcaaaggtcaaagcaagattttgatgaaccaagaacaagcgaagaaattctgccagttgcattagatgatatacagattcatgaggaagacccacaaccaccggtagccgatgatgaggcagaggaggttccattttctgatgctccaatcgtcggtgctccattccggttgatttcattcgttgctaggtatgtcagtggtgctgatttggtgaaccagaagtaattctccattaatgccatcaagcagcttgagatctgtatttcttggaaagaggagtcttcctgttttgattctgctcacacagttatctcgctaagattgtgaggatgtatacgatggatgcactgaattcaacagagatatggaacctctgttcagttcttggtagtgtgctcgtgtcactaccagtttttcttcctcccctgtcaatttttcaggggcagcagaagctcttgttccccagttatagtgttatacacacaagaggccttcctgaccatgtggggtgtactgaccatatttattctacagaaactgaaaatttttggtattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0333000, RefSeq:Os03g0333000