Os03g0333800

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0333800| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001056561.1 GI:115452850 GeneID:4332747| ...")
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Gene Name

Os03g0333800

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001056561.1 GI:115452850 GeneID:4332747

Length

2919 bp

Definition

Oryza sativa Japonica Group Os03g0333800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12385208..12388126

Sequence Coding Region

12385666..12385748,12385997..12386031,12386147..12386204,12386960..12388049

Expression

GEO Profiles:Os03g0333800

Genome Context

<gbrowseImage1> name=NC_008396:12385208..12388126 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12385208..12388126 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccggcggcgcaggagccttgggccattctggccgcaatccctaacgtggtggggtacaaggaggcgaagcgcatcttcccgccgggcaccgacatctccgtcgcccgcaaggaggtcccgcgagcctccgtcctgaccgtgccgcgccacatctccctcccggcctgcctcggactctacccctatgtcgtcgccgccgaccgctctggccttctcctcctcggcacgcatcctgtcacctccgcctccgccatggtctcctaccacatctgtgatgcgcacaccggtgaggtagtctccctccgcgactgcaaaccaatgcgccccatgaccttctacggcgccgccaacgtcggtctcatcatcaaggacgacggctgtatggtcgctgagctccagccgggatgcaagggcacaagcaccggtggtgccactctgctcagctacaaggtgggggagtgctgcaagtggcgcgagagggagcttacctgctcgcccccactcccgctggactggtacccggagggcgtcgtctcccacggcgggatgctctggtgggtggacctctcctacggcctcctcgcgtgcgatcccttcgccgaggagccgaacctgatccacgtcccgctcccacaagttcccgacgagcttcctgttgatgaccaggttaaccgcggtgcccaccgctgcgtgaaggtgagcggaggaaggctgatgtacgtgcagatacacggcaatcctgttgtgccggtggtcagcacatggttgctcgacgaatcgacctgctcgcccggggagtgggagtggaacccccagctcagcgcgcccttggccgagctctggattgaccagagctatgtggacaccatgctgccgttgaccattcctgcccttgcgctcccccaccccacagatcctaacagggtatatttcttcctcaaatcttgcatcttcgcagccgacctacggttgaggaagctggtgtcattcaatagttttgagatgctcgacccaccgtgtgaactttggatgaagcgctcctcccacttggtccacgcatggcagtatgatccttcaagcagtcgttctgactttgtattggcatgcttgaggcaagacaaggcaattgcttctaagagcagcttctctggtataattcctgtcactcgtagaactgctaaaagtttgaagagagtttgggattctgtaaccaggcagcagcaaaagcaggagcagcagctgcagaagcaagctatgtaa</cdnaseq>

Protein Sequence

<aaseq>MAPAAQEPWAILAAIPNVVGYKEAKRIFPPGTDISVARKEVPRA SVLTVPRHISLPACLGLYPYVVAADRSGLLLLGTHPVTSASAMVSYHICDAHTGEVVS LRDCKPMRPMTFYGAANVGLIIKDDGCMVAELQPGCKGTSTGGATLLSYKVGECCKWR ERELTCSPPLPLDWYPEGVVSHGGMLWWVDLSYGLLACDPFAEEPNLIHVPLPQVPDE LPVDDQVNRGAHRCVKVSGGRLMYVQIHGNPVVPVVSTWLLDESTCSPGEWEWNPQLS APLAELWIDQSYVDTMLPLTIPALALPHPTDPNRVYFFLKSCIFAADLRLRKLVSFNS FEMLDPPCELWMKRSSHLVHAWQYDPSSSRSDFVLACLRQDKAIASKSSFSGIIPVTR RTAKSLKRVWDSVTRQQQKQEQQLQKQAM</aaseq>

Gene Sequence

<dnaseqindica>2379..2461#2096..2130#1923..1980#78..1167#gttcccctttcgtgattgcccggtcgcggcctcgccgctaaccctaaccgatcgaattcctccgaaaaaatccagccatggcgccggcggcgcaggagccttgggccattctggccgcaatccctaacgtggtggggtacaaggaggcgaagcgcatcttcccgccgggcaccgacatctccgtcgcccgcaaggaggtcccgcgagcctccgtcctgaccgtgccgcgccacatctccctcccggcctgcctcggactctacccctatgtcgtcgccgccgaccgctctggccttctcctcctcggcacgcatcctgtcacctccgcctccgccatggtctcctaccacatctgtgatgcgcacaccggtgaggtagtctccctccgcgactgcaaaccaatgcgccccatgaccttctacggcgccgccaacgtcggtctcatcatcaaggacgacggctgtatggtcgctgagctccagccgggatgcaagggcacaagcaccggtggtgccactctgctcagctacaaggtgggggagtgctgcaagtggcgcgagagggagcttacctgctcgcccccactcccgctggactggtacccggagggcgtcgtctcccacggcgggatgctctggtgggtggacctctcctacggcctcctcgcgtgcgatcccttcgccgaggagccgaacctgatccacgtcccgctcccacaagttcccgacgagcttcctgttgatgaccaggttaaccgcggtgcccaccgctgcgtgaaggtgagcggaggaaggctgatgtacgtgcagatacacggcaatcctgttgtgccggtggtcagcacatggttgctcgacgaatcgacctgctcgcccggggagtgggagtggaacccccagctcagcgcgcccttggccgagctctggattgaccagagctatgtggacaccatgctgccgttgaccattcctgcccttgcgctcccccaccccacagatcctaacagggtatatttcttcctcaaatcttgcatcttcgcagccgacctacggttgaggaagctggtgtcattcaatagttttgagatgctcgacccaccgtgtgaactttggatgaagcgctcctcccacttggtccacgcatggcagtatgatccttcaagcagtcgtatgtatcttttgtctctgcccttctctttatcttgatgtgttcagatgatagctcatatttcgatgttcctgccaattgtcattagcatggataaatcaatctgatccaccgcttatatcaaaactctactcagaccactcagaccctgtataaaatatccagtacccttgaactaaaacaagaccataaatcctatcctggtttctttataattttagcttgaagatccacaacttccggaacaccgatatgagctagatagtgtgataattgtgtgtttatacttgtttaattctgaaccaatgctcgctgctatataccttattcctgtacatattcctgtatagtttgtactgctccatttgatggaatactgctagtataactttagtgattgcaagagtgacgtaggtccggaatagttcttccatattctctagaaatgttccgttgcctcttacaaattaaatgatacagggaactgccaaaccgagtgatgggatgttttgcccttgaatggaatgggtgtaaccaccttgtgacactgggaatgtatagatgttacatcttttacagttgtgcttatgaggcacacggaccacttggttttcatggggaattattgatatttttaggtgtattgtttctctgcagaatatttagccagtttatagtgcttataaatcttagttgaagtgtcattctgttgctctcctcagcttacatataaccactgtaatttctttttttaggttctgactttgtattggcatgcttgaggcaagacaaggcaattgcttctaagagcaggtgaccctatacttcactttaacttccaattagattttcttgcatatccttaactttaacttccaagaagtagattttctttcaatggcctaatacaatctttcttttgattcagcttctctggtataattcctgtcactcgtagaactggtatgtactatataatctatgcaattcttcaattgcaattattggatggggtgtttcttttgtccaggttgtagaaaagtgagcaaatttcaaataacgccagacatagtgttttgtcaaacgtactctgtaaaatttgattgaatacgtccttatggtgtgagtatgttaactgtggtgccatgtttttttcccttcggtccagagtttttgtactgaagagctgatattatctgttgtattttcagctaaaagtttgaagagagtttgggattctgtaaccaggcagcagcaaaagcaggagcagcagctgcagaagcaagctatgtaaggtgcagaatctctgaagaaagcagaatcagccagcctcattaagtatgaaggaagggtagagtatattattttgtgcatgatttgccagcctcattaaccaggatttatgaaaacgatctgatacagcatgagcttacttgtgagttcttgttctgtgccttttcttaggcctatttataagggagacgcttcatgtacagcttgagtacaaacgtgaatcttgactgttggatgcatttatgaggattttaaccattccgatcttgagttgtcccaaataagactttcaatagacagtcttcaatgttaaatagaaacatgttaattagttctacaaccataccatgcatgcatgtgtacgtgacagtcttcaatgcttggacagtactatggctgaatatttgtaactgatgtaacggttaggatgtatcaaaataagatagcttgaaaaaagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0333800, RefSeq:Os03g0333800