Os03g0334000

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0334000| Description = Similar to Ribosomal protein S6 kinase| Version = NM_001056562.1 GI:115452852 GeneID:4332748| Length = 4085 bp| Def...")
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Gene Name

Os03g0334000

Description

Similar to Ribosomal protein S6 kinase

Version

NM_001056562.1 GI:115452852 GeneID:4332748

Length

4085 bp

Definition

Oryza sativa Japonica Group Os03g0334000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12390843..12394927

Sequence Coding Region

12391235..12391534,12391657..12391764,12391874..12392047,12392145..12392265,12392344..12392426
,12392529..12393185

Expression

GEO Profiles:Os03g0334000

Genome Context

<gbrowseImage1> name=NC_008396:12390843..12394927 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12390843..12394927 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtttcctctgaaataagctctgttacaacaacccatgcacaaggtcccaagctctttagagggaagatacttctgccaatgggccctccagatgttgtgccttctgagaacgttgagttcgatttttctgatgtttttggtcctacggcagtccagactcccacagatctgagcatcctcactccagacagtcctgcacctttgactgagtccagtgaggggatttacaatgaccctttggttattgtcaagagatctcattctcttgttggtccaagttcacttgttagccaatctttgccacttagtaagcttacactgcatgaatctgatagcgcattggaccttctggagtgtactaaagaaaagaaaagcaaccaagaagctctgagtgatgaagagcttgatgatacaaaaaatgagaatggtgttgttggacttgacgactttgaagtcttgaagcttgttggccaaggggcatttggcaaggtctttcaagtgagaaagaaaggtacttcagaaatatacgcaatgaaagttatgaggaaggacaagattttggagaagaaccatgctgagtacatgaaagcagagagagatatactgactaaagttgatcatccttttgttgtacagctgaggtactcctttcagacaaaataccgactttaccttgtgttggacttcataaatgggggccatcttttcttccagctctaccaacagggtttgtttagggaggagcttgcacgcatctacactgctgaaatcgtgtctgctgtagcccatctccatgccaatggaattatgcacagagatctgaagcctgagaacatcttgttggatgctgatggacatgccatgctgactgattttggcctggcaaaggaatttgatgaaaacactagatcaaactcaatgtgtggtactgttgagtacatggctccagaaattgttcagggccgtggtcatgataaggctgctgactggtggagtgtgggaatccttttgtttgaaatgcttacaggaaagcctccgtttgttggcggaaacagggacaaagttcagcagaagattgttaaggagaaaattaagcttccggcatatttatctagcgaagttcattctctgctaaaaggcttactgcacaaagaagctggcaggaggctgggctgtggaccaggcgggagcaatgaaataaagaatcacaagtggttcaagtcagtaaactggaagaagctagactcccgacagattcagccaagcttccgcccaaatgttgctggcaaaacctgcatcgccaactttgacgagtgctggaccagcatgcccgtgctcgactctccagtggccagccctgtcgctgcagatagcaacttcgtgggattcagctatgtgaggccagcgcccttccttcagaggccgagtcctctaggctga</cdnaseq>

Protein Sequence

<aaseq>MVSSEISSVTTTHAQGPKLFRGKILLPMGPPDVVPSENVEFDFS DVFGPTAVQTPTDLSILTPDSPAPLTESSEGIYNDPLVIVKRSHSLVGPSSLVSQSLP LSKLTLHESDSALDLLECTKEKKSNQEALSDEELDDTKNENGVVGLDDFEVLKLVGQG AFGKVFQVRKKGTSEIYAMKVMRKDKILEKNHAEYMKAERDILTKVDHPFVVQLRYSF QTKYRLYLVLDFINGGHLFFQLYQQGLFREELARIYTAEIVSAVAHLHANGIMHRDLK PENILLDADGHAMLTDFGLAKEFDENTRSNSMCGTVEYMAPEIVQGRGHDKAADWWSV GILLFEMLTGKPPFVGGNRDKVQQKIVKEKIKLPAYLSSEVHSLLKGLLHKEAGRRLG CGPGGSNEIKNHKWFKSVNWKKLDSRQIQPSFRPNVAGKTCIANFDECWTSMPVLDSP VASPVAADSNFVGFSYVRPAPFLQRPSPLG</aaseq>

Gene Sequence

<dnaseqindica>3394..3693#3164..3271#2881..3054#2663..2783#2502..2584#1743..2399#gagttcgccgagccgagcccgagcactcgccgccgcttcaaccgccgctccccgcaacgacgccccccccaccagcgaaggttcgtcgccgcgaggccctccccacccgcccccaaccctagcttcctcctctcctccccgtggatttgcgtttgcgtttcccgagacgtgacgcctctttctttcccccctgttttctactctctttttttttttgttttcagttcaattacgctgtctccgatctgaaattggcctccggagtacggagcattctgcgttttcggggttgtgatttcgtgtatgttcgcgcgcgctgctcatctaaatgattagatctgtggggacttatgttctttggatctgtgacgccctgggagtcgatttggggatttttccagtggtggaatttcaatttcagtgtccgatggatgattttggttcgggtagagaaattttgggttcgtaggtctgatgaatatgtgctgcgtgacatgcatatgcggtcaattctcgagttcttactcgcaaaaaaaaaatcgttagttcgcaaaccatataggaactaaatttacccaaaactcccaattaagtgatgcttgtgacattggtctaggtggataagtgggcgtcttttttgattcggcaagagaggtggggtggtcgctttccagatctgacttaagatggttcctatatgttaattttctttgtgtcgttgtaaatagttgggagttttgggtaaatttggaataccgtcattccctaaatttgacagtcaactgactacagttacagaatcacttacaattttctcctttgatcaatgtagcaccctgatgtgtcagcagcagatagggaaatagcatcttatgtttcaccggtaccacagtttttggcatagttatcgtattgtgcaaactgtatactgttaagaagaaactgcttttgcaatttatttttccctgtatagaacttgattctattgttagctttatgctctgaaattcatattagatgttgtgttgttggtgtttattttggtgtactttttgtggaaattagtgattttggtgcaaatttgctggcttgatgatcaccttctctttaacaaatcatgttgtttctacttatgattacttgcttatcatcatgattcatgacattgcagcaaataatacctagaaatgagaaccattttgcttccaataaaacattatagcttggaactttcttccacttacaattatggttgatggcaatttgtgctgaaaacaataatcataacacacatagccataaggcaatatacatacgtagcctgatgttattctttattaattttcccttttaacattcttctgcacaaagctgcattttgtgaaactaactatattttttgttctacctgcagccatagacaagttggtctcatgaattcaggaagcacattggcatccagagtttcctgttcatcgggaaacaacggcatcttcccaccctgccttctcccaggattcctgggattcccagttgtgtttgtaaacttccacttgttcaaggccattgttcgcagccctgcatcttctgttgtgttgggaatctgtggagggcgccttccatagagaggtgccccataagtcttttgtttagttagtctgggaactggcatagctggaatttgtggtgcaaaacatccttggcatcagtagtctacactgctgaatctcaggttcctgaagatggtttcctctgaaataagctctgttacaacaacccatgcacaaggtcccaagctctttagagggaagatacttctgccaatgggccctccagatgttgtgccttctgagaacgttgagttcgatttttctgatgtttttggtcctacggcagtccagactcccacagatctgagcatcctcactccagacagtcctgcacctttgactgagtccagtgaggggatttacaatgaccctttggttattgtcaagagatctcattctcttgttggtccaagttcacttgttagccaatctttgccacttagtaagcttacactgcatgaatctgatagcgcattggaccttctggagtgtactaaagaaaagaaaagcaaccaagaagctctgagtgatgaagagcttgatgatacaaaaaatgagaatggtgttgttggacttgacgactttgaagtcttgaagcttgttggccaaggggcatttggcaaggtctttcaagtgagaaagaaaggtacttcagaaatatacgcaatgaaagttatgaggaaggacaagattttggagaagaaccatgctgagtacatgaaagcagagagagatatactgactaaagttgatcatccttttgttgtacagctgaggtactcctttcaggtatgcatttatcatctctgtgtgttctttgttgtcaagctatcatgcatgttatatttttcagtcttgtcccaaattttaaacccagtatttacttggcagacaaaataccgactttaccttgtgttggacttcataaatgggggccatcttttcttccagctctaccaacagggtttgtttaggtaatttcattacattattttatgtttattcctatcgctttgcatgaacatttaattaagcaaccttttgtctgtcagggaggagcttgcacgcatctacactgctgaaatcgtgtctgctgtagcccatctccatgccaatggaattatgcacagagatctgaagcctgagaacatcttgttggatgctgatggacatgtaaggatcctttaatacatatttttcttcaccttctctgactttatctactgattggtatttgggaatttacggaatttttcattgtcttatttaggccatgctgactgattttggcctggcaaaggaatttgatgaaaacactagatcaaactcaatgtgtggtactgttgagtacatggctccagaaattgttcagggccgtggtcatgataaggctgctgactggtggagtgtgggaatccttttgtttgaaatgcttacaggaaaggttagttatttaagcacgatgtttctgcatagaagatgtgtttgcattacagatggtttgcttctatatatccttttgttcccatgctcactcttattatattctgcagcctccgtttgttggcggaaacagggacaaagttcagcagaagattgttaaggagaaaattaagcttccggcatatttatctagcgaagttcattctctgctaaaaggcgtaagttgtttgccaagttgctatgattcaccgcacccatatttttttgcagccttgtgctagtttctagagtcaacctgtttgatcttgggattgaatttttagtccatcttatgtttcagttactgcacaaagaagctggcaggaggctgggctgtggaccaggcgggagcaatgaaataaagaatcacaagtggttcaagtcagtaaactggaagaagctagactcccgacagattcagccaagcttccgcccaaatgttgctggcaaaacctgcatcgccaactttgacgagtgctggaccagcatgcccgtgctcgactctccagtggccagccctgtcgctgcagatagcaacttcgtgggattcagctatgtgaggccagcgcccttccttcagaggccgagtcctctaggctgaagacctccagttgagaccgaaatacatcttgccactgggtatgaagctgacaaaatttactgtttcgatgattattatgtaaaactacctatttatgttgttcggtttgtctgggaaaaccccagtatcttttcttcgttgaagatactagtaaaagatgaacgtggtacttgttgaaaccagacaaatttgtctattgccagatggaacagttgccctggcttctatgatcaacccctgccccctgggccctgggcccctggcacatttaggttttctcggccgttcacgtacatgtttccaaatccaaatcctgctgcatgttgcaacacaaatcctgttgagatgcaaatttaaagcataccgtttatgcatgttgaaatgtaaattcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0334000, RefSeq:Os03g0334000