Os03g0334200

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0334200| Description = Conserved hypothetical protein| Version = NM_001056564.1 GI:115452856 GeneID:4332750| Length = 3665 bp| Definition ...")
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Gene Name

Os03g0334200

Description

Conserved hypothetical protein

Version

NM_001056564.1 GI:115452856 GeneID:4332750

Length

3665 bp

Definition

Oryza sativa Japonica Group Os03g0334200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12405538..12409202

Sequence Coding Region

12406770..12406890,12406994..12408810

Expression

GEO Profiles:Os03g0334200

Genome Context

<gbrowseImage1> name=NC_008396:12405538..12409202 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12405538..12409202 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaagcgtaaacactggaggtttacgcctggtgagatgcccaaagtgttataacattctaccagaacctcccagtgttgaggtctacaagtgtggtggttgtgacaccatacttcgagttaaaatccgtcccagcaatggacaaaatgtagcgacgaaacaagtccggcaagactccgatgatttttcggttgctaccaccgcgagcaatggagtgcatcctcaaaagaaggatattgctttcagtggtgctaccatggacagatcccgtacccctgatgctccgagcactgacacagagcatgccagtaatggcacgagcagcaacgataatggccatgctatgtcagttgagaataatgcttctgaagttgcagatactgacaacaaggaagattgcaatttggatggccagaacactagtggaaggatcgaaggcccttctgaagaaataccacccaatgcaaatggcatggatatcgattccgacagagaggaaacctacaatgtggaaggaattgctgagaattcagaggattgcagggtaagaggaggtggagatattgatacagaatgcaacctgagtttacctgagcacgaattgcccttacatcaggagagcaagtcagactccgagctgaaggaagcaaccaaaaccgaagacgaggcaaccaagaaaggccatcttgtgagggtgcaatcccgttcttgcgatcttcgagagtcgcatcgcgcgtcggccggtagctcaatggatttccactctgccaggacttccctccagtccaagagcttcagggcgagcgagccgctccaatcgaagatcatgaagacagtggacgagctgagaggtgacctctctgaatttttcagcaaacctgaagaagaaggagaagacgacgacgatcgcaagccaaaaacagcagcttaccctcctcgtccttcaaagcaagacggctacagcaagcctcgtgcgccgttcacttccagtgtgccactcacggcttaccaccctgcagctaagcattccggccatgtatctcgcctgagcaggtcaggccaagtccctcctcctcctcatcatcatcgtgagctttcctcgctgcgatatcgccggcggcgcagggcctactcgtgctgccacagcgaccagatggagacgatgaggcgaccgtgctcccacgactgctgccattaccatagctgccggccaccaccatgtcaccaccatgaccggccatggaagagccaagaaggcgcgatgcaaaggccgccggtgcaggagacgacgaggcgccgggctccgcccaggcaccactgccggccggtgctgcgcggcgcgccgttcgtcgtctgctccggctgcaaccggctggtccagctgcccaccgacttcgccgtcccgagcaaaggcacgcgccggctgcagtgcggctcctgctcggagatcctctcctactcgtacagggacccggccaagaagaagctccagtctccgtccggcgacggcgaggagtgccagtacagcaccgacgactacgagatccatcaggcggccggcgacgccgacccgttctcgtactcggaggagtacggcgtgatcagctactccaccgaggaggagcagcagccgctgcacgtgtcgaggaactcgtcgttcgacaccgtcgacgacgagcggagcgccaagctgcaccggctgatggggtactcgtcggcgagcgagctgctgcggctgcggcgctcccccgacctgtacgagagcttcggagagcggacgcccgctgcaagaacgagtgacacgaagggcaaggccatctgcgtagctgacgaagaggagcatcccagcgcgaaggtgagaagaggccgtggcttgccgctcccagggatcctgaagaaggggatccatggactggaatccctgaagctcaggtag</cdnaseq>

Protein Sequence

<aaseq>MASVNTGGLRLVRCPKCYNILPEPPSVEVYKCGGCDTILRVKIR PSNGQNVATKQVRQDSDDFSVATTASNGVHPQKKDIAFSGATMDRSRTPDAPSTDTEH ASNGTSSNDNGHAMSVENNASEVADTDNKEDCNLDGQNTSGRIEGPSEEIPPNANGMD IDSDREETYNVEGIAENSEDCRVRGGGDIDTECNLSLPEHELPLHQESKSDSELKEAT KTEDEATKKGHLVRVQSRSCDLRESHRASAGSSMDFHSARTSLQSKSFRASEPLQSKI MKTVDELRGDLSEFFSKPEEEGEDDDDRKPKTAAYPPRPSKQDGYSKPRAPFTSSVPL TAYHPAAKHSGHVSRLSRSGQVPPPPHHHRELSSLRYRRRRRAYSCCHSDQMETMRRP CSHDCCHYHSCRPPPCHHHDRPWKSQEGAMQRPPVQETTRRRAPPRHHCRPVLRGAPF VVCSGCNRLVQLPTDFAVPSKGTRRLQCGSCSEILSYSYRDPAKKKLQSPSGDGEECQ YSTDDYEIHQAAGDADPFSYSEEYGVISYSTEEEQQPLHVSRNSSFDTVDDERSAKLH RLMGYSSASELLRLRRSPDLYESFGERTPAARTSDTKGKAICVADEEEHPSAKVRRGR GLPLPGILKKGIHGLESLKLR</aaseq>

Gene Sequence

<dnaseqindica>1233..1353#1457..3273#gtacacacaagcgaagcaaaagcgcggtgcggagaagtctccccgccggggaggcccgttcacaccggtgattgggttggagcaattaaagctttcctcctagtcaaccccagctcctctgcgaggaaagaattgatctcttttataatcctgggctctcactgttcgtttgcttcttcgtttcgcctgccaaactttccgagaagcggagcagcagttgaggagaaacgacggggagaagcggccgaggaggtctggagaaaaggtgagttcttggcttcttcctcctcctcctcctccttttcgccctcatttctccctctttcctgtctccggatttagtatacttcagtttttgtcttgggagtttgggagggagttcgtgctcataccctcatatctcccctgttcgtctccctctctcggcgtcttcacgttcttcttgggtagaactgtagaagtagaagcaggagtctttaggtgttcttgacgatgctcggtgagttctgttcttgatgcctctctgtttttctttttttttttctgcgatatgcttccactggagttgtacaggtttcagtaattcagtttgtgttgctagtttgtgctactgatagtaatactaaccacgatcatggcagcatttgttctctgatcttagctttctacatactgtagtacagtagttctttgaatttgtccgacaaggttaatcggtcgaggactggtagtattgagacaattgctgatgttctcagttctctgatgacctggatgagcaggggacagacatgtgtgtccttttttagctgttacctattcatgtaaatagctttttaggtggttgtttccctggtcaataaagtccgagtaagttccccttgctctgtgttgctaatatatgactgatcgcacactaatttcagtgcctcaagatgcgttgatcgtgtatttatatttcttaatctcgttcggcatctcttctgattttgatgctgctgaagttagttcatgactttgtccttagtctgtgtcctcattgctcttctatggatgcaagtccagccgagactgctagatagattctgaacatctttttcttgcacattttcaggctcagcgggcgttgtaatattagagctcagaggacaccattgacaagcagaggaattaggttctacatcaacctgataaattgtgcatcgtgtgatgttctgggcgtttcttgcttcatggcaagcgtaaacactggaggtttacgcctggtgagatgcccaaagtgttataacattctaccagaacctcccagtgttgaggtctacaagtgtggtggttgtgacaccatacttcgaggtaaacttgtgtgattcgcttagctgggtactgggtagcagtaaatttgatcatttgttcatctgttggctgacttgttcctgatgatttccttcttatgcagttaaaatccgtcccagcaatggacaaaatgtagcgacgaaacaagtccggcaagactccgatgatttttcggttgctaccaccgcgagcaatggagtgcatcctcaaaagaaggatattgctttcagtggtgctaccatggacagatcccgtacccctgatgctccgagcactgacacagagcatgccagtaatggcacgagcagcaacgataatggccatgctatgtcagttgagaataatgcttctgaagttgcagatactgacaacaaggaagattgcaatttggatggccagaacactagtggaaggatcgaaggcccttctgaagaaataccacccaatgcaaatggcatggatatcgattccgacagagaggaaacctacaatgtggaaggaattgctgagaattcagaggattgcagggtaagaggaggtggagatattgatacagaatgcaacctgagtttacctgagcacgaattgcccttacatcaggagagcaagtcagactccgagctgaaggaagcaaccaaaaccgaagacgaggcaaccaagaaaggccatcttgtgagggtgcaatcccgttcttgcgatcttcgagagtcgcatcgcgcgtcggccggtagctcaatggatttccactctgccaggacttccctccagtccaagagcttcagggcgagcgagccgctccaatcgaagatcatgaagacagtggacgagctgagaggtgacctctctgaatttttcagcaaacctgaagaagaaggagaagacgacgacgatcgcaagccaaaaacagcagcttaccctcctcgtccttcaaagcaagacggctacagcaagcctcgtgcgccgttcacttccagtgtgccactcacggcttaccaccctgcagctaagcattccggccatgtatctcgcctgagcaggtcaggccaagtccctcctcctcctcatcatcatcgtgagctttcctcgctgcgatatcgccggcggcgcagggcctactcgtgctgccacagcgaccagatggagacgatgaggcgaccgtgctcccacgactgctgccattaccatagctgccggccaccaccatgtcaccaccatgaccggccatggaagagccaagaaggcgcgatgcaaaggccgccggtgcaggagacgacgaggcgccgggctccgcccaggcaccactgccggccggtgctgcgcggcgcgccgttcgtcgtctgctccggctgcaaccggctggtccagctgcccaccgacttcgccgtcccgagcaaaggcacgcgccggctgcagtgcggctcctgctcggagatcctctcctactcgtacagggacccggccaagaagaagctccagtctccgtccggcgacggcgaggagtgccagtacagcaccgacgactacgagatccatcaggcggccggcgacgccgacccgttctcgtactcggaggagtacggcgtgatcagctactccaccgaggaggagcagcagccgctgcacgtgtcgaggaactcgtcgttcgacaccgtcgacgacgagcggagcgccaagctgcaccggctgatggggtactcgtcggcgagcgagctgctgcggctgcggcgctcccccgacctgtacgagagcttcggagagcggacgcccgctgcaagaacgagtgacacgaagggcaaggccatctgcgtagctgacgaagaggagcatcccagcgcgaaggtgagaagaggccgtggcttgccgctcccagggatcctgaagaaggggatccatggactggaatccctgaagctcaggtagtcactcgtcaggtcatagcggatgatgtacactactctattttttgaggattaactgattatggccagtttagggaattcagaaacgggcttggttattagggtgctgggatagtgggtaagatgctgataggtgtgatagttcattgtatttgatcattagtttgtgtaaaggttggttttctgtggcaattttgtgtgctttttggtggtggtgtgtgatttgcagtattgttgattgtataggctaaaaaggctacgacctgtgtgcaaattagctgttgtaactattttgagtttttttttaatcttgatagaggagtttttcttccttctgaaatggaaaaggattgccacttttgattatgaatgtttgaagctgctgtacgtatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0334200, RefSeq:Os03g0334200