Os03g0335100

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0335100| Description = Conserved hypothetical protein| Version = NM_001056567.1 GI:115452862 GeneID:4332754| Length = 1555 bp| Definition ...")
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Gene Name

Os03g0335100

Description

Conserved hypothetical protein

Version

NM_001056567.1 GI:115452862 GeneID:4332754

Length

1555 bp

Definition

Oryza sativa Japonica Group Os03g0335100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12440727..12442281

Sequence Coding Region

12441148..12442128

Expression

GEO Profiles:Os03g0335100

Genome Context

<gbrowseImage1> name=NC_008396:12440727..12442281 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12440727..12442281 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcagggcggtggtggttcttcgtcggactctggagcgacgtcgacgggagctgaagtcgacgacgaggagaaagctatcagcgccgtgatcgacgccgcacagctcaagtgggaggccccgacgtcacaaggaggccactgttacggtcaccgcggcgcacacgcgggcagggcgccgccggccgggtacgtgtgccaccggtgccgcgtcccgggacacttcatccagcactgccccaccaacggcgatccaagattcgacatcccgagggtggcgccaactccagcgtcctcaccggcgccggctgagtccggggaatctggcggcgtcatcccggcggagctctactgcaagatttgccggaacgtgatggccaacgcggtgctggcgagcaagtgctgcttcgacagcttctgcgacaggtgcatccgggaccacatcgccgccaagtccaggtgcgcgtgcggggcgcaggcgcgcgccggcgacctgatccccaacacgacgctccgcaccaccatcgccaacctgctcgccaccaccaccggcgccgcagcaagcgcctcaagtggaaccgacaagacgaggagctccgccggcagcaacgcgccacagccggcggcgccgcagagcccggccgcttcgcaggcgagccgcagcaacgtgtcttccaagaagagcgccacgatctcatcgggtgtcctcggaccaagaaaggcgcgggagatggtggtgccgggcgaccactcagcacaatccggggctctcgccgtcgacggcgatcgccacggcagctacggcttcccgttcggcccggcgccaggctacgtcgaccccttcttcgccgtcggcgtgccattcggagccgatccttacatgtactacggcggcgcgccttacggctgtggcggcgctgcttacggctactacggcggcgaggatcgccgtgacacgaagaggacgcgcctgcgatga</cdnaseq>

Protein Sequence

<aaseq>MSQGGGGSSSDSGATSTGAEVDDEEKAISAVIDAAQLKWEAPTS QGGHCYGHRGAHAGRAPPAGYVCHRCRVPGHFIQHCPTNGDPRFDIPRVAPTPASSPA PAESGESGGVIPAELYCKICRNVMANAVLASKCCFDSFCDRCIRDHIAAKSRCACGAQ ARAGDLIPNTTLRTTIANLLATTTGAAASASSGTDKTRSSAGSNAPQPAAPQSPAASQ ASRSNVSSKKSATISSGVLGPRKAREMVVPGDHSAQSGALAVDGDRHGSYGFPFGPAP GYVDPFFAVGVPFGADPYMYYGGAPYGCGGAAYGYYGGEDRRDTKRTRLR</aaseq>

Gene Sequence

<dnaseqindica>422..1402#gttcgatctcacaatcactgctgctgcaccattcgtccattcctttcctcctccgttctccgacgatcgctgctgcacaattcctttcctcctccgttctccgacgatccagctcgaggaacgatccatggcggtgttctacaggtacaggagcggggtggacaccttctccgtgcccatgcaggagccttccgtctccgtcgccgagctcaagcgcctcatcatggccaccgcgcgccacggccattgacgttcgcgcggccgcggccccagggagagcgtcgcgctgtacagcgacaacaccggcgaggagtacgcggacgaggccgagctgatcccgagcggctgcacggtcgtcgtgcggcgccgagtcgcggggccacctgcagagacgatcgtcgagttgacaacaaagaagccaatgtcgcagggcggtggtggttcttcgtcggactctggagcgacgtcgacgggagctgaagtcgacgacgaggagaaagctatcagcgccgtgatcgacgccgcacagctcaagtgggaggccccgacgtcacaaggaggccactgttacggtcaccgcggcgcacacgcgggcagggcgccgccggccgggtacgtgtgccaccggtgccgcgtcccgggacacttcatccagcactgccccaccaacggcgatccaagattcgacatcccgagggtggcgccaactccagcgtcctcaccggcgccggctgagtccggggaatctggcggcgtcatcccggcggagctctactgcaagatttgccggaacgtgatggccaacgcggtgctggcgagcaagtgctgcttcgacagcttctgcgacaggtgcatccgggaccacatcgccgccaagtccaggtgcgcgtgcggggcgcaggcgcgcgccggcgacctgatccccaacacgacgctccgcaccaccatcgccaacctgctcgccaccaccaccggcgccgcagcaagcgcctcaagtggaaccgacaagacgaggagctccgccggcagcaacgcgccacagccggcggcgccgcagagcccggccgcttcgcaggcgagccgcagcaacgtgtcttccaagaagagcgccacgatctcatcgggtgtcctcggaccaagaaaggcgcgggagatggtggtgccgggcgaccactcagcacaatccggggctctcgccgtcgacggcgatcgccacggcagctacggcttcccgttcggcccggcgccaggctacgtcgaccccttcttcgccgtcggcgtgccattcggagccgatccttacatgtactacggcggcgcgccttacggctgtggcggcgctgcttacggctactacggcggcgaggatcgccgtgacacgaagaggacgcgcctgcgatgatcgcacgtcaccggtcaattgttgcctgctggctgcgctcaacgctagcttggagatattttcttctctcctttttgtgttctccgatgattcggaagacaagtagcgagtcaaaacatgtatgattcttgtatagttgtatgtgtaaatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0335100, RefSeq:Os03g0335100