Os03g0335200

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0335200| Description = Similar to WRKY1 (WRKY transcription factor 17)| Version = NM_001056568.1 GI:115452864 GeneID:4332755| Length = 2315...")
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Gene Name

Os03g0335200

Description

Similar to WRKY1 (WRKY transcription factor 17)

Version

NM_001056568.1 GI:115452864 GeneID:4332755

Length

2315 bp

Definition

Oryza sativa Japonica Group Os03g0335200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12445238..12447552

Sequence Coding Region

12445331..12445567,12446270..12446367,12446506..12447118

Expression

GEO Profiles:Os03g0335200

Genome Context

<gbrowseImage1> name=NC_008396:12445238..12447552 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12445238..12447552 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>catggcgttctcgtcggagggcggcgtgccggcggagagggtggcggcggcggtgaacgacctggtggaggtgcgcgacggattggtgaggctgaggggcttcttgccgccgccgccgcaggccgagcaatcgtcgtcgcggccgccgtgcgcggcggagctgatggacgcgacgatgagcaagctgatgagcgcgatggccacgttgggcggcagcggcgacatcgccggggaggtggacgctcctctaacaagagagtcgccgcaacactagaagacggtcacgtgtggcggaaatatgggcagaaagatatccaaaactcaccttatccaaggagctactacaggtgcacgcacaagctagaccaaggctgcggtgccaggaggcaaacccagcgctgcgaggccgacccgtcgaattacgacatcacctactacggcgagcacacctgcagggacccttccacgattatcccgacggccatcgccaacgccgccggcgcggcgagcgacgggccaaacaacaacatcatcagcttcgccacaggcggcgtcgttgttgctaattcgtctcggctggcgagggaagggacgacggcgacgacgacgagcgcggccacgcagctgtcctcctcgtggggcacgagcggcggtggcggcggcggcgacgacgtgttcagctcgtcgggggagcggttcatgcagtgggacgagctcgcggcggccgtcgggcacgtgagctcggtgggggtgacgtcgtcgacggtgggctccgcgccggcggcggagaacgacggcggaaacggtgacacggctgcgggaggaggaggagacggcggcggcgcgggcagcttcccgtcgtctccgagcgccggcagcctcggttttgtggtcggcccgctcgggagcatcgaggacgtcgatgacttcttcccgttcgatccctga</cdnaseq>

Protein Sequence

<aaseq>HGVLVGGRRAGGEGGGGGERPGGGARRIGEAEGLLAAAAAGRAI VVAAAVRGGADGRDDEQADERDGHVGRQRRHRRGGGRSSNKRVAATLEDGHVWRKYGQ KDIQNSPYPRSYYRCTHKLDQGCGARRQTQRCEADPSNYDITYYGEHTCRDPSTIIPT AIANAAGAASDGPNNNIISFATGGVVVANSSRLAREGTTATTTSAATQLSSSWGTSGG GGGGDDVFSSSGERFMQWDELAAAVGHVSSVGVTSSTVGSAPAAENDGGNGDTAAGGG GDGGGAGSFPSSPSAGSLGFVVGPLGSIEDVDDFFPFDP</aaseq>

Gene Sequence

<dnaseqindica>94..330#1033..1130#1269..1881#tttgcacggtatatatcccagtctgtgtgtgagtgtgtgtggtctgtggagtgtatggttgatttggttggtaattggctaagctagctatagcatggcgttctcgtcggagggcggcgtgccggcggagagggtggcggcggcggtgaacgacctggtggaggtgcgcgacggattggtgaggctgaggggcttcttgccgccgccgccgcaggccgagcaatcgtcgtcgcggccgccgtgcgcggcggagctgatggacgcgacgatgagcaagctgatgagcgcgatggccacgttgggcggcagcggcgacatcgccggggaggtggacgcggcgggaaggtggacctcggtggccgagtcggccgatccgatggtggtcaggcgggagggcgagagctcggccgggaggacgaggaggcgccgcggcggcggcagcaggtcaaaacctgaattaccactgattgactagttttgctactcctgagtcctgacttcctgaggctgaggcgagtcaagtactgcaccccctggccgttgatatctaaatccaacggtttggggggtcgtatgtatgcaaccaccagcggatggagagaggcatcagatggattcaatggcgacgcgctatgtcttgtccacttgtctaatatttggtggcacgatcgtgtgtcaaactggcaactcagactctgccaattaagttaccgaatttgagggtaattaattatgggttgagaaggggttagaaggagagggggtggttgatggcatgcatgcttgaacaagctacacgaatcttagagccatttgatccggccagccaagaatagctaatagttatagttatgaaacagtagcaggttaataaattaaaaaaatatatagcactagattagtgtctcgataagcaattctaatgagcaagtattgctaattgagctgatcatatatccattatgtatttttgttttcttaattattttttatagtatataatttatctgctatatgtacaggtcaggacgaggacgctcctctaacaagagagtcgccgcaacactagaagacggtcacgtgtggcggaaatatgggcagaaagatatccaaaactcaccttatccaaggtactcctaggataattaatcatacactcccttaataattgcacaaaagtattactatagtactatcggtctctaacatcagaagttgtgttaagcgcgctgtacacggtaattaaccattattgatgacacatgcaggagctactacaggtgcacgcacaagctagaccaaggctgcggtgccaggaggcaaacccagcgctgcgaggccgacccgtcgaattacgacatcacctactacggcgagcacacctgcagggacccttccacgattatcccgacggccatcgccaacgccgccggcgcggcgagcgacgggccaaacaacaacatcatcagcttcgccacaggcggcgtcgttgttgctaattcgtctcggctggcgagggaagggacgacggcgacgacgacgagcgcggccacgcagctgtcctcctcgtggggcacgagcggcggtggcggcggcggcgacgacgtgttcagctcgtcgggggagcggttcatgcagtgggacgagctcgcggcggccgtcgggcacgtgagctcggtgggggtgacgtcgtcgacggtgggctccgcgccggcggcggagaacgacggcggaaacggtgacacggctgcgggaggaggaggagacggcggcggcgcgggcagcttcccgtcgtctccgagcgccggcagcctcggttttgtggtcggcccgctcgggagcatcgaggacgtcgatgacttcttcccgttcgatccctgagatgagatcggcgccgtcgattgaaccagcagtttgcagcggacggatttacacaacgttcgtagtatactaccagtacatagtagcaaacgcatcaaggctttagtattaagttgcataatggcatctctgtggaaatcaaataagcaaatatagaaccatctagtacattaagtaggttgcttatctacagactagactacagtgactcacacagcttctagctgtgcaagttggttaaggtgatgttttagattgaaatccaagccacgcatgttgatgagccggaattgggctcactaaaatgtggcttaagtttttgtttttttgtttggattgcttgttggcggcccaatggtaaacggtcactcttttcttctcagtttgcaagcctagcccactataccgacaaggaaaaacccatgtaatctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0335200, RefSeq:Os03g0335200