Os03g0335500

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0335500| Description = Protein kinase-like domain containing protein| Version = NM_001056570.1 GI:115452868 GeneID:4332757| Length = 3832 b...")
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Gene Name

Os03g0335500

Description

Protein kinase-like domain containing protein

Version

NM_001056570.1 GI:115452868 GeneID:4332757

Length

3832 bp

Definition

Oryza sativa Japonica Group Os03g0335500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12461938..12465769

Sequence Coding Region

12462437..12463893,12464024..12465482

Expression

GEO Profiles:Os03g0335500

Genome Context

<gbrowseImage1> name=NC_008396:12461938..12465769 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12461938..12465769 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgggctctggtggtgctggttggcttggcctgcctcgccttcgtggcggaggccaagggcggcggcgcggcctcggcggcggcgctggacgacgacgtgctggggctgatcgtgttcaaggccgacgtggtggacccggaggggcggctcgcgacgtggagcgaggacgacgagcggccgtgcgcttgggccggtgtcacctgcgacccgctcaccggccgcgtcgcggggctctccctcgccggcttcggcctctccggcaagctcggccgcggcctcctccgcctcgagtcgctccagtccctctcgctctccggcaacaacttctccggcgacctccccgccgacctcgcccgcctcccggacctccagtcgctggacctcagcgccaacgctttctcgggcgccatcccggacggcttcttcggccactgccgcaacctccgcgacgtctccctggccaacaacgccttctccggcgacgtcccgcgcgacgtcggcgcgtgcgccacgctcgcgtcgctgaacctgtcctccaaccgcctcgccggcgcgctgccgagcgatatctggtcactgaacgccctgcgcacgctggacctctccggcaacgccatcaccggcgacttgccggtcggcgttagcaggatgttcaacctgcggtcgctgaacctgcggagcaaccgcctcgcaggcagcctccccgacgacattggggattgcccgctgctgaggtcagtggacctcggctccaacaacatctctggcaacctgccggagtcgctgcggaggctctccacttgcacataccttgacctgagctcaaacgcgctcaccggcaatgttccaacttgggttggagaaatggcaagcttggagacgcttgatttgtccgggaacaagttttccggggagatcccggggtcgattggcgggttgatgtcattgaaggagctgaggctgtcggggaatgggttcaccggtggcttgccggagtcaattggtggatgcaagagcctagtgcatgttgatgtgagctggaattctctgaccggcaccctgccttcctgggtctttgcttccggcgtgcaatgggtatcggtgtcggacaacaccttgagtggagaggtgtttgtacctgtgaatgcatcttcgatggttcgaggcgtggatttgtcgagcaatgcgttttcaggaatgatcccatctgaaatctcccaggtgatcaccttgcagtcactgaacatgtcctggaactcgctgtctgggagtattccgccgagcattgtgcagatgaagtcacttgaggtgcttgatttgactgcgaacaggctcaatggaagcattccagctactgttggaggagagtcattgagagagttgaggctggcgaagaactcccttactggagaaatcccagcacagattggcaatctctctgcccttgcatcactggatctctcacacaacaacctgacaggcgcaattccggcaacaatagccaacatcaccaacctgcagactgttgatctttctcggaacaagctcactggtggtctaccaaagcagctctctgacctgcctcaccttgtacgcttcaatatttcacataatcagctctctggggatctccctcctgggagcttttttgacactatccccctctcatcagtgtctgacaatcctggcctttgtggtgcaaagctaaattcttcttgtcctggtgtgttaccaaagccaattgtgctgaacccagactcttcttcggatccactatcacaacccgagcctacaccaaatggcctacgtcacaagaaaactatactaagcatctcagcccttgtcgcaattggtgctgctgttctcattactgttggtgtcataaccattacagttctcaaccttcgagtgcgcactccaggctctcattctgctgctgagctagaactctctgatggatatctcagccagtcccccacaactgatgtgaattcaggcaagcttgtcatgtttggaggcggtaatccagaattcagtgctagtacccacgctctcctgaacaaggactgtgagcttggtcgtggtgggtttggcactgtctataagactactctgcgagatggccaacctgttgccatcaagaaactgactgtgtctagcttggttaaatctcaagatgagtttgagagagaagtgaagatgctaggcaagctacgccaccgcaaccttgttgcgctcaagggatattattggacaccatcacttcagcttcttatatatgagtttgtttctgggggtaacttacataaacaactgcatgaatcatccactgcaaattgtctctcatggaaagagaggtttgatatagttcttggcattgcaagaagcctggcccatctccaccgccatgacattatccactacaatctgaagtcaagcaacattctgcttgatggatcaggcgatgccaaggtgggggactacggattggcaaagcttctgccgatgttggatcggtatgttctaagcagtaaggtccagagtgcacttggttacatggcaccagagtttgcgtgcaggactgtgaagatcactgaaaagtgtgacgtgtatggatttggagttcttgcccttgagatattgacagggaggacaccggtgcagtacatggaagatgatgttattgtgctttgcgatgtggtaagggctgctttggatgaagggaaggtggaagagtgtgttgatgagaggctctgcggaaaatttccgctagaggaggctgttccaatcatgaaacttggtctagtgtgcacttctcaggttccttccaataggccagacatgagtgaggtggtgaacatactggagttgatcagatgcccccaggatagccctgaaactgaattaggttaa</cdnaseq>

Protein Sequence

<aaseq>MRALVVLVGLACLAFVAEAKGGGAASAAALDDDVLGLIVFKADV VDPEGRLATWSEDDERPCAWAGVTCDPLTGRVAGLSLAGFGLSGKLGRGLLRLESLQS LSLSGNNFSGDLPADLARLPDLQSLDLSANAFSGAIPDGFFGHCRNLRDVSLANNAFS GDVPRDVGACATLASLNLSSNRLAGALPSDIWSLNALRTLDLSGNAITGDLPVGVSRM FNLRSLNLRSNRLAGSLPDDIGDCPLLRSVDLGSNNISGNLPESLRRLSTCTYLDLSS NALTGNVPTWVGEMASLETLDLSGNKFSGEIPGSIGGLMSLKELRLSGNGFTGGLPES IGGCKSLVHVDVSWNSLTGTLPSWVFASGVQWVSVSDNTLSGEVFVPVNASSMVRGVD LSSNAFSGMIPSEISQVITLQSLNMSWNSLSGSIPPSIVQMKSLEVLDLTANRLNGSI PATVGGESLRELRLAKNSLTGEIPAQIGNLSALASLDLSHNNLTGAIPATIANITNLQ TVDLSRNKLTGGLPKQLSDLPHLVRFNISHNQLSGDLPPGSFFDTIPLSSVSDNPGLC GAKLNSSCPGVLPKPIVLNPDSSSDPLSQPEPTPNGLRHKKTILSISALVAIGAAVLI TVGVITITVLNLRVRTPGSHSAAELELSDGYLSQSPTTDVNSGKLVMFGGGNPEFSAS THALLNKDCELGRGGFGTVYKTTLRDGQPVAIKKLTVSSLVKSQDEFEREVKMLGKLR HRNLVALKGYYWTPSLQLLIYEFVSGGNLHKQLHESSTANCLSWKERFDIVLGIARSL AHLHRHDIIHYNLKSSNILLDGSGDAKVGDYGLAKLLPMLDRYVLSSKVQSALGYMAP EFACRTVKITEKCDVYGFGVLALEILTGRTPVQYMEDDVIVLCDVVRAALDEGKVEEC VDERLCGKFPLEEAVPIMKLGLVCTSQVPSNRPDMSEVVNILELIRCPQDSPETELG</aaseq>

Gene Sequence

<dnaseqindica>500..1956#2087..3545#ctcgctcgccgttacaaccttccacttcccactcccactccgcccactccctccttctcccctcccctctcccactgcaatggcgttctccggtaagccggcggcgacgtagacggccggcggcgtgcacggtaagccctgtttcggcgagtgcttgctactgccacccagtgaaagtcactggctcactgctcattcttggaatgctccgtttctagtagtaactgaattctagctgggggctcttaatctcactcgcattttttgtttcttctcttcgatttgtgcagcggggaagaaggtgccgtttgaatcttggaggccaatcttctgaagattcaggcgaagctcgtcgtctcctgggcgcgttcttgcggcgtttcttggagcattttggctcgccgccggcggccttgcgcgttccggcttccgaggcaagaaggccatcctttttttttcttgctgctcgtgcgcgtttcggctctccggagtcgcggcaatgcgggctctggtggtgctggttggcttggcctgcctcgccttcgtggcggaggccaagggcggcggcgcggcctcggcggcggcgctggacgacgacgtgctggggctgatcgtgttcaaggccgacgtggtggacccggaggggcggctcgcgacgtggagcgaggacgacgagcggccgtgcgcttgggccggtgtcacctgcgacccgctcaccggccgcgtcgcggggctctccctcgccggcttcggcctctccggcaagctcggccgcggcctcctccgcctcgagtcgctccagtccctctcgctctccggcaacaacttctccggcgacctccccgccgacctcgcccgcctcccggacctccagtcgctggacctcagcgccaacgctttctcgggcgccatcccggacggcttcttcggccactgccgcaacctccgcgacgtctccctggccaacaacgccttctccggcgacgtcccgcgcgacgtcggcgcgtgcgccacgctcgcgtcgctgaacctgtcctccaaccgcctcgccggcgcgctgccgagcgatatctggtcactgaacgccctgcgcacgctggacctctccggcaacgccatcaccggcgacttgccggtcggcgttagcaggatgttcaacctgcggtcgctgaacctgcggagcaaccgcctcgcaggcagcctccccgacgacattggggattgcccgctgctgaggtcagtggacctcggctccaacaacatctctggcaacctgccggagtcgctgcggaggctctccacttgcacataccttgacctgagctcaaacgcgctcaccggcaatgttccaacttgggttggagaaatggcaagcttggagacgcttgatttgtccgggaacaagttttccggggagatcccggggtcgattggcgggttgatgtcattgaaggagctgaggctgtcggggaatgggttcaccggtggcttgccggagtcaattggtggatgcaagagcctagtgcatgttgatgtgagctggaattctctgaccggcaccctgccttcctgggtctttgcttccggcgtgcaatgggtatcggtgtcggacaacaccttgagtggagaggtgtttgtacctgtgaatgcatcttcgatggttcgaggcgtggatttgtcgagcaatgcgttttcaggaatgatcccatctgaaatctcccaggtgatcaccttgcagtcactgaacatgtcctggaactcgctgtctgggagtattccgccgagcattgtgcagatgaagtcacttgaggtgcttgatttgactgcgaacaggctcaatggaagcattccagctactgttggaggagagtcattgagagagttgaggctggcgaagaactcccttactggagaaatcccagcacagattggcaatctctctgcccttgcatcactgtaagtttaagaacctctcactgattcgattcaatagttcggcgagcattgtatattgctcaaaccatttctactttatatatcgtctaacaccacactatcctgtttttggtgtatttactgtttgcagggatctctcacacaacaacctgacaggcgcaattccggcaacaatagccaacatcaccaacctgcagactgttgatctttctcggaacaagctcactggtggtctaccaaagcagctctctgacctgcctcaccttgtacgcttcaatatttcacataatcagctctctggggatctccctcctgggagcttttttgacactatccccctctcatcagtgtctgacaatcctggcctttgtggtgcaaagctaaattcttcttgtcctggtgtgttaccaaagccaattgtgctgaacccagactcttcttcggatccactatcacaacccgagcctacaccaaatggcctacgtcacaagaaaactatactaagcatctcagcccttgtcgcaattggtgctgctgttctcattactgttggtgtcataaccattacagttctcaaccttcgagtgcgcactccaggctctcattctgctgctgagctagaactctctgatggatatctcagccagtcccccacaactgatgtgaattcaggcaagcttgtcatgtttggaggcggtaatccagaattcagtgctagtacccacgctctcctgaacaaggactgtgagcttggtcgtggtgggtttggcactgtctataagactactctgcgagatggccaacctgttgccatcaagaaactgactgtgtctagcttggttaaatctcaagatgagtttgagagagaagtgaagatgctaggcaagctacgccaccgcaaccttgttgcgctcaagggatattattggacaccatcacttcagcttcttatatatgagtttgtttctgggggtaacttacataaacaactgcatgaatcatccactgcaaattgtctctcatggaaagagaggtttgatatagttcttggcattgcaagaagcctggcccatctccaccgccatgacattatccactacaatctgaagtcaagcaacattctgcttgatggatcaggcgatgccaaggtgggggactacggattggcaaagcttctgccgatgttggatcggtatgttctaagcagtaaggtccagagtgcacttggttacatggcaccagagtttgcgtgcaggactgtgaagatcactgaaaagtgtgacgtgtatggatttggagttcttgcccttgagatattgacagggaggacaccggtgcagtacatggaagatgatgttattgtgctttgcgatgtggtaagggctgctttggatgaagggaaggtggaagagtgtgttgatgagaggctctgcggaaaatttccgctagaggaggctgttccaatcatgaaacttggtctagtgtgcacttctcaggttccttccaataggccagacatgagtgaggtggtgaacatactggagttgatcagatgcccccaggatagccctgaaactgaattaggttaagctctatctgatgtggttcccttttttgttagttttcttattccattttaagatccttctttgcttggcaactgataaaatgatgagacatgaaggggattctatctgttatgcttagtactaggagcaagtgtgaagtttctgggtagtattttggtagctaaggagttattatgtaatgcatgaaatagtttcatggcctgtggctgttgatgtgtttgactctgatcctcatcaggatgttaactgttgtggatcctctcacatcaattatatatgctgtttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0335500, RefSeq:Os03g0335500