Os03g0347500

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Revision as of 12:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0347500| Description = Similar to Senescence-associated protein (SAG29)| Version = NM_001056634.1 GI:115452996 GeneID:4332825| Length = 344...")
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Gene Name

Os03g0347500

Description

Similar to Senescence-associated protein (SAG29)

Version

NM_001056634.1 GI:115452996 GeneID:4332825

Length

3442 bp

Definition

Oryza sativa Japonica Group Os03g0347500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13056688..13060129

Sequence Coding Region

13057119..13057454,13058737..13058856,13059189..13059561,13059709..13059745,13059935..13059971

Expression

GEO Profiles:Os03g0347500

Genome Context

<gbrowseImage1> name=NC_008396:13056688..13060129 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13056688..13060129 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttcaggcattggtctttgctgtggggatcgtaggcaacatattgtcgttcttggtcatccttgcaccagtgccgacgttttatcgggtgtacaagaagaagtcgacggagtcgttccagtcggtgccgtacgcggtggcgctgctgagcgcaatgctgtggctctactacgccctcctcacctccgacctcctcctcctctccatcaactccatcggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggccatggccttcaccctcaagctcgtctgcgccatgaacctcgccctcttcgccgccgtcgtcgccgccctccagctcctcgtcaaggccaccgaccgccgcgtcacgctcgccggcggcatcggcgcctccttcgccctcgccgtcttcgtcgccccgctcaccatcatcaggcaagtgatcaggaccaagagcgtggagttcatgcccttctggctctccttcttcctcaccctcagcgccgtcgtctggttcttctacggcctcctcatgaaagacttcttcgttgccacgccgaacgtgctgggattgctgtttgggctggcccagatggtgctgtacgtggtgtacaagaaccccaagaagaactccgccgtgtcggaggcggccgccgcccagcaggttgaggtcaaggaccagcagcagctgcagatgcagctccaggcgtcgccggcggtggcgccgctcgacgtcgacgccgacgccgacgccgacttggaggcggcggcgccggccaccccgcagcggccagctgacgatgacgccatcgaccacaggagcgtcgtcgtcgacatcccgccgccgccgcagccgccgccggcgctgccggccgtggaggtggcctga</cdnaseq>

Protein Sequence

<aaseq>MVQALVFAVGIVGNILSFLVILAPVPTFYRVYKKKSTESFQSVP YAVALLSAMLWLYYALLTSDLLLLSINSIGCLVESLYLTVYLLYAPRQAMAFTLKLVC AMNLALFAAVVAALQLLVKATDRRVTLAGGIGASFALAVFVAPLTIIRQVIRTKSVEF MPFWLSFFLTLSAVVWFFYGLLMKDFFVATPNVLGLLFGLAQMVLYVVYKNPKKNSAV SEAAAAQQVEVKDQQQLQMQLQASPAVAPLDVDADADADLEAAAPATPQRPADDDAID HRSVVVDIPPPPQPPPALPAVEVA</aaseq>

Gene Sequence

<dnaseqindica>2676..3011#1274..1393#569..941#385..421#159..195#aacctgtgtcagttcaggtggtagtagcaaacacacacacagctagctagagggttgatctcctaaattgctcttggattaatactggtgtgtagagcaggagaggagatcatcctctgatcaaactctaattaagctagcatctcatatcctccaagatggttcaggcattggtctttgctgtggggatcgtaggtaacacacatgcacacactagctaattcgagattacacacttctataacaactaaccacatctagcatgcagtagtattagtggtttccacaacaagtatagtatgcatccatgcatgcatgcattatacttcaatttgccactcgaactaactaattttccttattgctggtaaatgatttttgcaggcaacatattgtcgttcttggtcatccttgcaccagtgtaagtacctactagcttcatgagcattgagctaattaagtccatgatctgttaataatttgcatgcatcttgaaaaaaaaagagagagaacatgttaagctaattaatggatatatatgatgtgaatgcaatgcaaattaatgcaggccgacgttttatcgggtgtacaagaagaagtcgacggagtcgttccagtcggtgccgtacgcggtggcgctgctgagcgcaatgctgtggctctactacgccctcctcacctccgacctcctcctcctctccatcaactccatcggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggccatggccttcaccctcaagctcgtctgcgccatgaacctcgccctcttcgccgccgtcgtcgccgccctccagctcctcgtcaaggccaccgaccgccgcgtcacgctcgccggcggcatcggcgcctccttcgccctcgccgtcttcgtcgccccgctcaccatcatcgtaagcgcattaattcattcctcacatagtcacatacataatacctccgtttgttaatagaggctaccattaacttttaaacataaaatatataagatataaatcatgctttaaatatttttaagttataaaacaactcataataaaatagatgataattatataatttttaattacacaaatgatcaaatatgtatacgatattatctattaaaaaataccatagcttcatctaactatatatctgtttcattaatttgattataagataattaattaattagcatattaacaagaactaacatcaagtttgattaaatttggttttgcagaggcaagtgatcaggaccaagagcgtggagttcatgcccttctggctctccttcttcctcaccctcagcgccgtcgtctggttcttctacggcctcctcatgaaagacttcttcgttgccgtacgtcctattattttctcttttttacttgtttttgtcccgttctttctcaacatctctagctagtagcaagcaaggagtccatccagccatgcaagctactccctccgtttcacaatgtaaatcattttaagattttccgtatttatattgatgttaatgaatctagatagatatatatgtctaaatttattaacatcaatataaatgtggagaatgttagaatgacttacattataaaacggaggaagtagctagctagccagcttaagggcacccacaatggctatctataggctctctacaagagatccatgtcagcatattttactacttggaagagattaaatgaagagagagagcaaagctatctactaacctggagatagtctatagagaaaaacgaggcaatggattagacagctatagatacccatgtagacataccattgaagtagtttactattaatctagtctattgctgagatgtacatgttttatagatagcaccttactttaccattgcgggtgctctaagcaactgttaattgttgtgcttttattaggtagtaataattaattaatcatgcatggatagtgatgtgagctagtgcgtgtcgcttgtgtcaccgcccatgagccagatgttttctgccgagaggcgagagcacagcacaaaagatcaccgccactattcatcacttgtataacctatctttcgccaaagcagagcttacgtactctcgcaagcctaaaaagccctgattaaactacgtaaacgtactcatcacacacgattatatttaaccaggagatttttgttgtagccagctgcatgcatccccgcatatattccagtagtaattaattagaacaataaattaagctatatatattgattaaattacggatttgctagaaaattttcacaagtttttttccctagctcaaaacttttctcgaggcttgtgcatgaagaaaaaaattaataaaaataaaatttcacacatgttacgtgtaaaatttcaatactagttgaatgcaagttttatagtgttgtaagttatatcgtagttaccatgtactccctccgtttcataatgtaagtcattctaacattttccacattcatattaatgctaatgaatatggtaaatactagaatgacttacattgtgaaacggacggaggaagtaattacattttaattatattataacaactttttagcggtagtgttttagatactcccttaaattattaatatcgcatttatatgcagacgccgaacgtgctgggattgctgtttgggctggcccagatggtgctgtacgtggtgtacaagaaccccaagaagaactccgccgtgtcggaggcggccgccgcccagcaggttgaggtcaaggaccagcagcagctgcagatgcagctccaggcgtcgccggcggtggcgccgctcgacgtcgacgccgacgccgacgccgacttggaggcggcggcgccggccaccccgcagcggccagctgacgatgacgccatcgaccacaggagcgtcgtcgtcgacatcccgccgccgccgcagccgccgccggcgctgccggccgtggaggtggcctgatcgatcagtgagagggtgacgtattgagctgcttgtactgcacgcgtgatgaccacgactgaccagagtgacctaattactgtgtgttagctgcagctcattctagctgaatcgcatgcatcttagctaattaattattatatatatctgcatgcttaattaattaagtcgcgatatatatgtgactgtatgtatctgttgccgcgttctttattctgagttgtaggatgattagaattttgctagtgggctaagtacatgtatgcacatgatcatctatcagctgctggtcgatgcgtgtatcgccgtacgtgtatgattggggacacgtgtactgcatctgcatgctagtacgtggcatctcagtttatggtactagctagacactgtactgctctccaatcaataaaagcccatgtatcaattgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0347500, RefSeq:Os03g0347500