Os03g0347800

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Revision as of 12:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0347800| Description = Peptidyl-tRNA hydrolase family protein| Version = NM_001056636.1 GI:115453000 GeneID:4332828| Length = 4770 bp| Def...")
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Gene Name

Os03g0347800

Description

Peptidyl-tRNA hydrolase family protein

Version

NM_001056636.1 GI:115453000 GeneID:4332828

Length

4770 bp

Definition

Oryza sativa Japonica Group Os03g0347800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13083242..13088011

Sequence Coding Region

13083622..13083630,13083784..13084011,13084083..13084167,13084290..13084357,13084923..13084973
,13085048..13085167

Expression

GEO Profiles:Os03g0347800

Genome Context

<gbrowseImage1> name=NC_008396:13083242..13088011 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13083242..13088011 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgactgccgcatctgtttttggatctggtggatgtttggaattactaacgtcgagtaaagccatgcgaggaaagctttggacaagacttgcccctttcatatccaagcgtcatgcttcaacctctcagacctcattatcttcatcttcttcgtcatgctccgtgataaatccatggctctttgttggtctcggcaaccctggtgagaagtatcaatgcaccagacacaatgttgggtttgatatgatagacatgtttgcacagtctcagggtatatctctaaccaggcatcccttcaaggcactatttggggaaggaatggtcgaaggtgtacctgttttgcttgctaagcctcaaacatatatgaatctcagtggtgaatctgttgggccacttgctgcctattataaattaccacttaatcgcgtccttgtggcatttgatgacatggacctgccctgtggagttcttcgtttacaacctaaaggaggatatgggcgccataatgggtctgttgattttataatcatgtgttttaatgaagtaatttgttga</cdnaseq>

Protein Sequence

<aaseq>MAMTAASVFGSGGCLELLTSSKAMRGKLWTRLAPFISKRHASTS QTSLSSSSSSCSVINPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFK ALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLR LQPKGGYGRHNGSVDFIIMCFNEVIC</aaseq>

Gene Sequence

<dnaseqindica>381..389#543..770#842..926#1049..1116#1682..1732#1807..1926#tccctcgcttccagctccgaaagcgccttccccccaagcccagcggcgtcgctgcctccctcctcggcgatcgccgcctccatttctcgcgctcgaggtccgcctcctttgcgccggcggcttgctggctggttgcttccccgccgcgtgcctcggaggggaccggccgtttcttgttgccctccttgcttgcttgcttgcttcctccccctcgtcgccgctcactccgcagcgggggtccccgccatatgtaagcagcatctcgacgatcttgtgtcgcgtagcctctaaacctgtgtgatttacaaggattagggcgtcgaattagacttccccgtgtaggtgtgcatcagagctgttcgacgtaatgcccgtgccgcatggcgatggttagtggcgcgcttccttccatgattgccatgtgtattgccgtattggcgttgaatgagcgaggcttattaatagtccacatcattttgattgctatgtatactattgtttctgttgtgtgtccgaaagaataatctggtcttctgctgcagactgccgcatctgtttttggatctggtggatgtttggaattactaacgtcgagtaaagccatgcgaggaaagctttggacaagacttgcccctttcatatccaagcgtcatgcttcaacctctcagacctcattatcttcatcttcttcgtcatgctccgtgataaatccatggctctttgttggtctcggcaaccctggtgagaagtatcaatgcaccagacacaatgtaagctttgcatctcattcttgtcttggtcatttattttcagaatcctatgacaccctttttcgctgcaggttgggtttgatatgatagacatgtttgcacagtctcagggtatatctctaaccaggcatcccttcaaggcactatttggggaaggtctggttcattacatctgatcccatagagaatgtatttttatattttgagcaatatatactctgttctctcggttgaaagggctgaattgaaactgttgtcttgtctttccattgatgcaggaatggtcgaaggtgtacctgttttgcttgctaagcctcaaacatatatgaatctcagtggtgaatctgtaagcatcacttttagaagtctttccatgttttagtatctgatttctactattccttactatcttggaataagtctatttcgtgtcaactcttggcatggtttaatttttgtccctgaactctaaaacccaaccgttctggttcatggtttattgccactacttatcttccaacagttctgtctcctcttcaagccctcaacaaaatcaattatgtttttgatgaatgcatgaatgtttcttatggtgctaattgaatcacaatgatttgctaagaaccatttccccctaaaatcaattatgtctgagctttattttggttggtgcaaccaaaatcctatcagcaatcagatattttagttgctatgatttgaacttgaaatctcaatacagaataaaatacataccaatgtctgttttggttagttctgtgtcttatttatagaaaggtcgtgtataattcagcttgtagaaatttctttaactggaaataaaaaaatggttataatacactgagcctgatctgatgactattggtgataagtccctttttggcctattgcaggttgggccacttgctgcctattataaattaccacttaatcgcgtccttgtggttagtattgtaatatctaatctttatgagcgctaagttacatggcaatctgatttctctattgtgagttttaggcatttgatgacatggacctgccctgtggagttcttcgtttacaacctaaaggaggatatgggcgccataatgggtctgttgattttataatcatgtgttttaatgaagtaatttgttgaaattaatttgtcatttaaaagactgacctgataagcaactttctgacaacctcatcaggaagagacaacatattgttcccttctaatatttttacttaataaatttttctcgtttgtagtggcaatttctgcatgcacctttccattttccccatatggacatgttctttttttttcccttttacatagcctgagacagccatagttctcttgaaaggtctaccagatataatgacactcttattagtgttctcttattttactcatttattttactattagctatatgatcctattttctgtttgtaaataagttttttttttacattgacaaaatatttacctttctagcttatcagggtgaagagcttgatataccattttcgtaagaaccgagaatttggtcgattaaggattggtaggttcgacatctgtgttcatttccctcccttaatgtggataaatattcttatactttaacttattcaggaattggacggccacctggccaaatggaccccaaagcttttgtgctccagaagtttaataagaccggtcgagaacgggtaaatatctatatggctagtacttgttagcgtcatgcccttttctgagtttttgtacagtaaccattggatgatttactttcataattctcaccggatgatcgtgctcatttgctgggatatatccatatgaccaaaaccatggctatattctgcatggaagtgagccgcacctagatttattctacttcagttaaatctgaataaattttgttgtgctatacgcaaatgagagatgatttataggcttgcaacatgtctatgtttagaagattaccttctggtcaacttccatgtggtgtgccaagccaatcctgtgaagtttacagcccttgagatctcttaaatctcaaattgttttaggtaataatgtcaccatgtcctcaaaattgaactgctggggttcctgaaggtacttggaggacttgttatgacaatctctgtcactcattagcgtttttttccatggaatcattctggtacatcatatttctggaagcaccatatttgacataattatttcactgtcacagtttttattattctgtatgtagcgaccctgaagaattgtgctgtgacaggtagtcttacgctttgcatgttttgttttatcctagattgattcagccatagaagagggtgttgagattcttaagttggttgttaccaagggtttgacagaggctgcaagatcatcaaatgtggatcagaagtataagcatctgacaacacacgacatgcaactgtaaagatgatgacagacgctgcttgtccgagagcgatccactattacctgttgaatgcctgatgggagaacctggtaacatctaaactgcttgattcattgatttgccaaacttattacaagggctgtcagccgtctcctttgcattggatttgtaagttttgatgctctcaatcttttttttttatacttttgaacaactgattcaataaataaaaacttgacggttctgtcagcttcaagattctatctaccatgcgctttaaagataaagctgatcatttttctttaaaagaagatggatatccattttacgcccgtattcagacctattacttatacaaggtgctaaaactcttcagcttctaccccatggactgaatggacggagccgaagaaacagcaaaagtacacggaagaggatcctctaacttacttccctctgactttgagtcattgacatgtgtacccgataggtaaagagcccacatatcaatgacacaagttagaggaaaataagttagaggattttaatccaaagcacacaagagtaagtagtactttccgtaataccatacgttctctgaacaagctggtaatattaggaaaaccacatgagcactgagcacacatatacatgcgccaagcagccctagattattaactaattttatttgctcttcagtccaaactcagcgtcgaaaattgcaatttgatgaacagtgatgtattcaacgaaatgacacttactgtgaaaacagagatgaacacagatttttgtgctgcctcaacaagcgcatcttttctgatccatttgaactgaaatatagggagaattacacaagtcatggcaaacagtttgccacgcacgacaacaaaacaccccagcaaactgcaagcacaaacactttttttttcttttttcttttttgcgaggacacaaacacctaattatatgcgtgcacacaattattcaacactcacaaagaattaaagacgttgcatgatgacaagatcatctaggcatctcatgtttactataggaattcactgctggcacatggagtgtagtataatatctagattatggggataggcttgacgaacagctgcttgatgatattcatgctgagcttgttgaaggtgtaggcgtcttcgctgccttggtagaagaacattatgctcatcgctaagttggcgactcggttcacagccggcacaagcgaggaacgctcaaagcgtgcttgattgatagttttccatgcgtcttcgaccagattacttatcacagccgtggcttcctcaccagtgacattgtgctccttcatgtaggactcaacagaggtggccatatctagtttgcccttcccgtgctgtgaccaacaaacacttaattagttactccctccatttgaactgactaataatgtcaaataaaaaaaaacgaaggtactcagttcaaatggagtagtattttatagaggattatattatatcccatgcacatgtcaaaataacataaaagattttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0347800, RefSeq:Os03g0347800