Os03g0348200

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Revision as of 12:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0348200| Description = Terpene synthase-like domain containing protein| Version = NM_001056638.1 GI:115453004 GeneID:4332831| Length = 8158...")
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Gene Name

Os03g0348200

Description

Terpene synthase-like domain containing protein

Version

NM_001056638.1 GI:115453004 GeneID:4332831

Length

8158 bp

Definition

Oryza sativa Japonica Group Os03g0348200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13115315..13123472

Sequence Coding Region

13115315..13115605,13115832..13116080,13118755..13118890,13118996..13119214,13119349..13119724
,13121629..13121802,13121840..13121887,13122864..13122889,13123357..13123472

Expression

GEO Profiles:Os03g0348200

Genome Context

<gbrowseImage1> name=NC_008396:13115315..13123472 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13115315..13123472 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgatccctccaagcagaggcgttggcatagtacagagaacaaatcggagggaaggacgagacaacatggtgaggggttgagaactatacatgcttacgattgtggcaaatgtgcacacacagtttctgtagttgcagcggccagagaaatggatgagagagagatccgatcagttaagaaaggacaaaaaatgaatctagttgacacgctccaacgcctggggatagatcatctctttgaggaagagatagccaccaccttgaataccattcatggtgctgaatttgacagccctagccttcatgacgttgccctccggtttcgcttgctgaggcagcaagggttatgggtttcatcagatgttttcaacaaattcaaacacagagatggaagctttatcattgacataacaaatgacccaaaaggtctcttaagcttatacaatgctgccaaccttctcacccacaacgaggaagccctccaggaagctatcttattttcaaggcatcatttggagttaatgaaaagtaacctgaagtccccattagctgagcaagtttcacgtgctcttcagataccattgtccagaaacttgaagagggttgaggccctatcttatatattagagtacaatgtacacgagcaaacatacaacccctcaatactggagcttgccaagctagactttaaccttcttcaacatattcaccaaagggagctcaagacaattactcagtggtgggaggatctttcaaatgacataggactagactacataagggatcgcattgttgaatgctacttttggtcatattctatgtactttgaggaggagtacacacgtgcccggatgatccttgccaagtttttcatgttaacatcattgttagatgacacttatgatacgcatgctactttggaggaatgtcgaaatctcaatgtggccatacaaagctgggatgagagtgatatttctgttctaccagattatctgaagaaattctttctcaaggtgatgagcaatttcgtggagttcgagaatgaattggaaccacatattaggcaccgcaatgcttacaataggaaagtgtttcaattgttatctgggtattatctccaggaggcagaatggttccatcataactacgtaccaagtttcaaagagcaaatagaagtgtcggtgatgtctgcaggtattcaagcactaagtgtatgtatacttgtcggcatgggaaatatagtaaccgaggagacacttgagtgggccattggcaacaatgatgccgttagggctggcggtgaggtggcacgtttcatggatgacatggctgcatttaagaatggaaggaacaaattggatgtagccagctccgtggagtgctacatcaaggagtacaatgttaccagtgaggttgccctagccaagataggttctttggtcgaagatgcatggaaaaccataaaccaagctcatattgatcgccgtgaactgttgccatttgtacatcgggtcaccaacctatcaaggagcatggctattttgtttcttgacaaaagagatgcatacacatacagtaaggatttcaaaaggacgatggagagccattttgtcaaacctattcccctttag</cdnaseq>

Protein Sequence

<aaseq>MDDPSKQRRWHSTENKSEGRTRQHGEGLRTIHAYDCGKCAHTVS VVAAAREMDEREIRSVKKGQKMNLVDTLQRLGIDHLFEEEIATTLNTIHGAEFDSPSL HDVALRFRLLRQQGLWVSSDVFNKFKHRDGSFIIDITNDPKGLLSLYNAANLLTHNEE ALQEAILFSRHHLELMKSNLKSPLAEQVSRALQIPLSRNLKRVEALSYILEYNVHEQT YNPSILELAKLDFNLLQHIHQRELKTITQWWEDLSNDIGLDYIRDRIVECYFWSYSMY FEEEYTRARMILAKFFMLTSLLDDTYDTHATLEECRNLNVAIQSWDESDISVLPDYLK KFFLKVMSNFVEFENELEPHIRHRNAYNRKVFQLLSGYYLQEAEWFHHNYVPSFKEQI EVSVMSAGIQALSVCILVGMGNIVTEETLEWAIGNNDAVRAGGEVARFMDDMAAFKNG RNKLDVASSVECYIKEYNVTSEVALAKIGSLVEDAWKTINQAHIDRRELLPFVHRVTN LSRSMAILFLDKRDAYTYSKDFKRTMESHFVKPIPL</aaseq>

Gene Sequence

<dnaseqindica>7868..8158#7393..7641#4583..4718#4259..4477#3749..4124#1671..1844#1586..1633#584..609#1..116#atggatgatccctccaagcagaggcgttggcatagtacagagaacaaatcggagggaaggacgagacaacatggtgaggggttgagaactatacatgcttacgattgtggcaaatggtgagtaaataaattgatttcagctctacaatgtggtattttttcttcacaaaagccagattctacttctcatcggtcttcacaaaccaatgtagtgacacgtgccaaaagcgagatgaaaagatagcttgtgtcttttaccgttgcaaggcataactgaaccatgctatacaccatacattgacctatcaatcactttcggagattaattagtagttggtaatatatatttatttgtaaaagatggaaacctttgagtttggaaaaacaaaaagagaatcctcgccgaaaacaaaaaacaaaaaaaaagaaaagaaaagaagagaacgaaagatgcatgtctcataacaagacataacctttttttttttgggaaaatcccagacataacctgtgtccatcgtgattctcatttaacttagcttctctggtgcctatataaacctctccatggtgtccatctgcagtgcacacacagtttctgtagttgcaggtcagtcacaactaaaacagaaaccagttagctgcagacaaaccacacacacaaattcatggcctcttcaagttgtacagctcccaaggcagcacctgagtttcaccccacagtttggggtgacttctttatcaactatgaaccacaacccttgcaggcatgcatgctcgtacactctattcccttacctagtgcagagtacacttatctcaaattgaagccaaatggttttgtatctaaatcttccctttctaatatttttctgttttataattacaagagaatacacacgtagtctcgccattacacaaacacactgggctgcttttcatcttttttgtttagctaggggcttcatgttcttaaccagttgagtattggatatgctaattaaccaagattaactaaatcaagtacttcgtcaaaatttttggaaatgcctcaagtactttacttcaaatttctgaattcgcaatctacaaatccaagtggattataatgcataaaaatcgagcatgttagacatttcaccatgacaagggacaacttataatatttattaaatataaaaatgataaaacaaataagatccatatgcatgatcaattttaaaccctttccctttttttttcaataaaggtggcataacttcttccttaaagtacttaaactagcacttcatctcatttatattcgaattcatgaacatgttctcctgttccagtatttctacatgtcaacaagctctttccacacatatatagcattctttagcgattcgtacaggttaccatgcatgcatgatttgcttaaaaagtgatctgctgaaaccataaatttttcatggatcgatatgcatgatgcttgcagtataataccttttctcatgtaccatgagagataaataaattgtcatcaaattgcttctcctttccacatatttttacctaacatatgtattaattcgtgttagcagcggccagagaaatggatgagagagagatccgatcagttaagaaaggacgtaagtcagctgttcgacgctttcgatggtgtggcagaaaaaatgaatctagttgacacgctccaacgcctggggatagatcatctctttgaggaagagatagccaccaccttgaataccattcatggtgctgaatttgacagccctagccttcatgacgttgccctccggtttcgcttgctgaggcagcaagggttatgggtttcatcaggtatgctgtaaaagtgaaatatttatatgctaatactccctttgtattttaatgtatgatgccgttaactttttaatcaacgtttgatcatttgtcttattaaaataatatatacaattatcatttattttactgtgacttgattcatcatcaaatgttctttaagcatgacataaatatttttatatttgcacaaaaattttgaatagaacgaatggtcaaattttggttaaaaaagtcaacaacgtcaaacattaaaatacgaaggaaatatatgctatccgcttgcaaatacttttttttttggtggggaaaagacagatatattactcagctaaagcctccttacaaacagcttgtgagattaaattacaacttccatccggccaaaactccgaacgagcattagtccggcctctattagctaagtaatgtctgatattgttctgactacgctgaattttccgaattctaacttcccttccttcagacagcatctctcctatgtctctaacaaggtaggcaagctgagaccactccttcttcttagattggatcatatcgactgcaaccaaacaatctgactcaacaatgatcggcagcaaggtccattgcaaagccagattaattccctctttgcaagctagaagttcagcttcaagagggttgcaacatctctctataaagccacaggctgaaaaaataacagttcctaacctgtccctaagcaccgcccctatgcctcctgtactagagctcgaatcaaaggaaccatcaacatttaacttcatccagcctggctgcggacgctcccaacggcatggaactgatcttttctctggtcttgccgctacacaattctgtaaaccagactgaaccacatgtttccctttaaccacatcgacaaggggaaactgtctaacttcaagcagagaactgcagtaactttccaggaatctttttgacacatcaataggcggaggaattttaccatgatataactcattacggacgaactagatccgccatagaagcattagcagcatcattctctcctcctttggtgttttttcaacttggttgagaaaccagtaacttcctgtaccatttccgactacgcccatggacaaataccctgaattctccagagctgcccaaagatgaacagcatgaggacagcgacaaagggcatgttcaacatcttctttttcattcccacagatgcagcaaacatcaactcgctccatgtttctctttttcttgttggcttgagttgccaggctattagttgcagcccgccaatcaaatatcttcaccttttgtggcacttcacatttccaaatcatatcccaagccgccttagagttttgtcctgaagaacttgagctttcatcagtagttgctaaggagagcaccaacttgtaagcactcctcaccgagaatcgacctaacttatccgggtgccacgcaggaaaatcctcctccagacgcactgaagtacggattctaaggatctcttcagtgtcaatcggcaggaaggtctgagacaccttaagagcatcccaagaaccatttgggctcaaaagatcagaaacccatttcaaacgatagtgtcccttcgtggtaatcggcctccgagagaggtctctcgggatccatggatctcgccaaatgcaaactgactggccattatcaatcctctagataatgcctttcttaagaagctctaggccaaattcgattgccttccaccccggaagttaggttcaactaggcaactctactttttgaaagttaatgttaacaaaattcccaggcttagtaataactgaaaagagctggtaacaaaaagaatattatataacaaatattatgattttaacatgcatgtgtgtactttgcagatgttttcaacaaattcaaacacagagatggaagctttatcattgacataacaaatgacccaaaaggtctcttaagcttatacaatgctgccaaccttctcacccacaacgaggaagccctccaggaagctatcttattttcaaggcatcatttggagttaatgaaaagtaacctgaagtccccattagctgagcaagtttcacgtgctcttcagataccattgtccagaaacttgaagagggttgaggccctatcttatatattagagtacaatgtacacgagcaaacatacaacccctcaatactggagcttgccaagctagactttaaccttcttcaacatattcaccaaagggagctcaagacaattactcagtaatttttcggagcatgctctaaatatatcaaactcaatatctatgagccctaatataaatggaatttgacaatgactagaacttttttactatcacttacaacaacatacacatatcctttcttaatttcaggtggtgggaggatctttcaaatgacataggactagactacataagggatcgcattgttgaatgctacttttggtcatattctatgtactttgaggaggagtacacacgtgcccggatgatccttgccaagtttttcatgttaacatcattgttagatgacacttatgatacgcatgctactttggaggaatgtcgaaatctcaatgtggccatacaaaggttatactattatttttgattaactttcatctagagaacaaaacatgggtataatcaatgaggtgaaatttgactaactaattcgtgcaaaaaatgaccatgcagctgggatgagagtgatatttctgttctaccagattatctgaagaaattctttctcaaggtgatgagcaatttcgtggagttcgagaatgaattggaaccacatattaggcaccgcaatgcttacaataggaaagtggtatgacacctttttacgtttacctccgtttgtattattgattttacaaattaaatagcaagtatgttcatttccctaatattcatgtaaaattcgcactatagctaattgatcaagtaaacatgccatcatctttcatggtgctacgatatttttccttaaaaacatcaaccatattttattacatgtaacaggaacccaattttggaattaagttaaaagaaaggtcccccaaaaacaggcaaggaccactgatgtaactgaaaccaaagataaattaagtaacatcttctggcccaagtttttaacttggaatggtatgctggttccaaaaaactggcaaggaccccaccatttttggctcaccttcctattgcttatatttcgtgaactaatttataaacaaaattttagtttccctaaagcaaatcggtgataaaagttggaaccagtctccttttggtatttggacagttgtaatttttgaaaccctacatgcttcatggtgcttacatattactcctttgatccagttacaagtatatataattttggatattgacatggtgttccaaatgctatttttttaatcaatcactaatttatattatttgtaacaatttaagttataatattatggagtaattttcaaggaaactactaaagtatgtgatcaaactttcatgagtcaaaatgtaaatatttaaaaatccacggatacttcaaactttgaattaattgactaggtgtttgaaatgaaattactatttgtaactgaaaattaagacaatatttaacaaataggtggatggattggtgaaggactttaaaaagaaaaagagaggtgttgcggactgttggaatggatagtaaagacaataaagcaaaaacaatgtttgcctaaccacaatgtgagattaaatagacccgccacatataaagttgcttgaaaaagtagggcactgaaaaatacctcaaaaactgaatatccaccacaaaagatgactaacttattgaatatattgatttgtagagcatacaaataggtacaatctgccaaacaaaaaaggaaccaaggaaaaaaaattagtagaacgatatttgagataaatgacaatataacataacccaatggcacctccacatcttccattcgcctagctcttccacctctgccgcaacatttctcactagacccccaagattatgattaaacaaacaaacaaacgagcaatcaatcttaaccaattaattatatatgtgccggccgctcaaatctgtccttaagtccgcgcacaacacacacatttgcaatgtcctcgaattcccaatatctacacctcttcgagagagatgccgttgccttttcctttatacagcttctctccatcttctcaagtcaaatcgatcgcagtcagaatgtcagatgagctgagaaatcagagaagaagttggctcgctcgcttttccagtctggtcgtcggcggtctccgccgtcgaggcggcgtcgaccgagccgcgcttcccgggccagcctccccatccttcctggctcctgccgcttgccaccgtacgccggtgccgcctcggcctcgtgcgccccttttttttctttctttttttttccgtttcagataatttactccgctaagtagggctggatcggagtggcagtagcccatgggcctcttgggccatggcccagcaaggcagcaactcctcgtcatccagaaaaggaattagtctattgtggatccttcaagtcttgatcctccctcataccgagtataacgtctccccaatctttaaaaactagagccaatcagttccctcgaccgtttggatagcagtctcatcctatgtaatgctcatatgacctacttgtcagtgagaaaaaaaataaaaacaatatggtcttacatgtcaatcatcttggtctccccctttgctctttctcctctctaccccgtcccccatagagtcatcgtatcctattaaaaaaaaagtttgccgatccttgtaatgggactaaacgcacataaaacaaaaaatgaaacgctacctccgttaaggacatcgtcctataataccttgatttcttaaatcattactggataaaaatattaagatttaatatgtgaagatagcattgatagatctgtgatgagaaaaaaaatattttatatggttttttttaaatatattttagaaatattaaaaaatattaatgatgagacaactacattggagactatggcggcttagctattcctctattttcgttggcacgcttttcaaactgttaaacggtgtattttacgtgaaaacttatatatatgtatacatacatatatgtgtatatgtatatgtatatgtatatgtatatgtgtatatatatatatatatatatgtgtgtgtgtaagttgtttaaaaaaatctaataaatttattcatcaaatttttatatattaatacttaattaatcatatgctaatatcatttctcgttttacgtgcggctaattactgtttcaaacatctaaaaagaacacagccatatatatcaatgtttggacaagtaaagaacagaggtagtatcagcatgcacttactatgtgatacacacacacccctacctcatagatcttagcattgttctgttttctcctatgcagtttcaattgttatctgggtattatctccaggaggcagaatggttccatcataactacgtaccaagtttcaaagagcaaatagaagtgtcggtgatgtctgcaggtattcaagcactaagtgtatgtatacttgtcggcatgggaaatatagtaaccgaggagacacttgagtgggccattggcaacaatgatgccgttagggctggcggtgaggtggcacgtttcatggatgacatggctgcatttaaggtatgagtttaagctttgtaaatagaacttactcctctactgtattgcttttatagtaggagtcactgacatatagatcctagagcatgtcagatccatgtgtcaatatgtcgtattgcaacagcagtgctagagatcaggatctctcttgtaaatatcaaatctaactttaccatggtatattgatacacatgcacattgctaaatctgtcatttttcttcatagaatggaaggaacaaattggatgtagccagctccgtggagtgctacatcaaggagtacaatgttaccagtgaggttgccctagccaagataggttctttggtcgaagatgcatggaaaaccataaaccaagctcatattgatcgccgtgaactgttgccatttgtacatcgggtcaccaacctatcaaggagcatggctattttgtttcttgacaaaagagatgcatacacatacagtaaggatttcaaaaggacgatggagagccattttgtcaaacctattcccctttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0348200, RefSeq:Os03g0348200