Os03g0350300

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Revision as of 12:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0350300| Description = SAR DNA-binding protein-like protein| Version = NM_001056648.1 GI:115453024 GeneID:4332841| Length = 3918 bp| Defin...")
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Gene Name

Os03g0350300

Description

SAR DNA-binding protein-like protein

Version

NM_001056648.1 GI:115453024 GeneID:4332841

Length

3918 bp

Definition

Oryza sativa Japonica Group Os03g0350300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13185568..13189485

Sequence Coding Region

13185805..13186209,13186491..13186625,13186708..13186908,13187149..13187448,13187539..13187739
,13188021..13188185,13188259..13188438,13188946..13188987,13189102..13189179

Expression

GEO Profiles:Os03g0350300

Genome Context

<gbrowseImage1> name=NC_008396:13185568..13189485 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13185568..13189485 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggtgctgttcgagacgcccgcggggttcgccctcttcaaggtgctcgacgaagggaagctcgacaaggtcgaggatttatggaaggagttcacgacgtctgactcggcgagaaaggtggtcgagctgaaggctttcaacaagtttgagaacacctccgatgccctttcagctgcaaccctcattattgacagcaagcctaccaagggtttgcgcaaattcttgcagaagcactgtgagggtgaaacgttagctgtagctgactctaaacttggaaatgctataaaggagaagctgaaaattgattgccttcataacagtgctgtgatggagctcatgagagggttaaggaaccagctcactgaacttatatctggtttgggtgcacaagaccttggtccaatgagccttggattgtcccacagcctgtctagatataagctgaagttcagtcctgaaaaggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctcaacacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaattgtagctgataacatacagtacgcaaaagttgtgaagatgatgggtgatcggactaacgcagaaagccttgatttctctgagatactctcagatgatgaggttgaagcacagttaaaagaggcggcagtaatatccatgggaacagaagttagtgaacttgatttgctaaatatcagggagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattatctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgtgggcgaattggttggtgctcgacttattgcacacggtggcagtttggtaaatctggccaagcagccgggcagcacaattcagatacttggtgcagagaaggctttgttcagagctctcaagacaaaacatgctacgccgaagtatggtctcatttaccatgcatccctaattggtcaagcagctccaaagcacaagggaaagatttctcgttctcttgcagcaaaaactgctcttgccattcggtatgatgcccttggtgatggtgaagacaactccattggtctagagagtcgagtcaagcttgagacgcggcttcgtgttctcgagggtaaagaacttggcaggtctgcaggttccactaaaggaaagcccaagatagaagtgtatgaaaaggaccggaagaagggtgctggggctttaatcactcctgctaagacatacaatcctgcggctgatctggtacttggacaatccactgaagaaactccaaagaagcctgaaggtgcttcgaagaagaggaaacatcaagagacggagcctgcaccagcagagaagaccactaaagaggatggtgaccaagaaggtgaaaagaaaaagaagaaaaagaagtccaaagagagcgaggaatctcctgcggccgatgctgacggtggcaagaaaaagaaaaagacgtccaaggagagcgaggaacctccagtggccactacagaaggtgagaagaaggagaagaagaaaaagaagaaatctgattcacaagatgccgaggatgttgccatggaaaccgaggagtctggcaagaaagagaagaagaaaaagaagaaacaccatagcgatgaatga</cdnaseq>

Protein Sequence

<aaseq>MLVLFETPAGFALFKVLDEGKLDKVEDLWKEFTTSDSARKVVEL KAFNKFENTSDALSAATLIIDSKPTKGLRKFLQKHCEGETLAVADSKLGNAIKEKLKI DCLHNSAVMELMRGLRNQLTELISGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMI IQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIQYAKVVKMMGDRTNAESL DFSEILSDDEVEAQLKEAAVISMGTEVSELDLLNIRELCDQVLALSEYRAQLFDYLRS RMNTIAPNLTALVGELVGARLIAHGGSLVNLAKQPGSTIQILGAEKALFRALKTKHAT PKYGLIYHASLIGQAAPKHKGKISRSLAAKTALAIRYDALGDGEDNSIGLESRVKLET RLRVLEGKELGRSAGSTKGKPKIEVYEKDRKKGAGALITPAKTYNPAADLVLGQSTEE TPKKPEGASKKRKHQETEPAPAEKTTKEDGDQEGEKKKKKKKSKESEESPAADADGGK KKKKTSKESEEPPVATTEGEKKEKKKKKKSDSQDAEDVAMETEESGKKEKKKKKKHHS DE</aaseq>

Gene Sequence

<dnaseqindica>3277..3681#2861..2995#2578..2778#2038..2337#1747..1947#1301..1465#1048..1227#499..540#307..384#ctcgccgccggcaccccctctcccgccgcatcccacaacacctcgctctaaaccctcgcggcggcggcggcggcggcggcgcctactccccctccccaccatctcgccgcagccggaccttcgcctcgcgctctcctccccccatcgtcgattcgcgtccaatcgagccaaggtttgcgccattttcttttcttgagggtgtatatatcctagctgctcggtttgacccaagctttcgatcttgtggtttttttttttgatttgggtttgtgatccaggtgtaggtgttctcgtgcggtgagagagatgctggtgctgttcgagacgcccgcggggttcgccctcttcaaggtgctcgacgaagggaagctcgacaaggtcgaggtgagtcttccgccaccgcctccgcctccgcggtttcagctcttcgtttgctttgctgctgtggagtgttcggtggactaattgcgctacgcgtttgtgttcatccttttttaggatttatggaaggagttcacgacgtctgactcggcgagaaaggtttgtgttttttcttttcacgttactcccaggacaaaatattcttcttctttttttatttaataatctcgttattgcacaagatatctcatatttatggagttaaataagccaggacccatggcttcagtaggttgattcaacataggtgattacaaccttctttctttttggggttttgtgactttgagagaagcaaagtgattttcaggaataaaaaaatacaactgagtaataattctctgatgctctgaaccgcagttttgttttggatgtgtaatttgtatggtgagagaagagggtaatggttagttcagtctcctataatataaatgccctgatgcacattggaatgacatggtgtggagaacagtattatatacataagctgtgttacttttctactttgaattgtgatgagcatctccatatcttcctcttactactgtttattttattattttgagttgattttctttcctgaccaaacaaattaactatattcaggtggtcgagctgaaggctttcaacaagtttgagaacacctccgatgccctttcagctgcaaccctcattattgacagcaagcctaccaagggtttgcgcaaattcttgcagaagcactgtgagggtgaaacgttagctgtagctgactctaaacttggaaatgctataaaggagaagctggttagtaggttccttggttgctttgtttatgttgaacaaacaatcatgcttataatttgacgtgcttttgcagaaaattgattgccttcataacagtgctgtgatggagctcatgagagggttaaggaaccagctcactgaacttatatctggtttgggtgcacaagaccttggtccaatgagccttggattgtcccacagcctgtctagatataagctgaagttcagtcctgaaaaggttagtcttttatttattccactattcatatttattgatcacgctatccagtgcttcttcctggctctgagtcatatgaatcaacatcattatcttttgttagtttccaaactagatttttcaatgccatgcttctgttaactttacatttaacttccatttgcaattaattagtctagcacttcagcattgtgatggactgaggttaacgttactgtttttatttgtacatgaccccatcctgacaagctaactgaggtaaattgtttctggttatacaggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctcaacacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaattgtagctgataacatacagtacgcaaaagttgtgaagatgatgggtgatcggactaacgcagaaagccttgatttctctgaggtaaattctggacatacctgatctgaatttaacggccatgactatacaccacaactggttcttgaatatgaagcaaatgcttttttccagatactctcagatgatgaggttgaagcacagttaaaagaggcggcagtaatatccatgggaacagaagttagtgaacttgatttgctaaatatcagggagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattatctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgtgggcgaattggttggtgctcgacttattgcacacggtggcagtttggtaaatctggccaagcagccgggcagcacaattcagatacttggtgcagagaaggtcagttgctatttgtgaaccttgaactctttaattattttccactctttgtagtttatgcaaaattgtcccttggatgatgggttctctaggcacatggggaagggatgcttgattgttgttttgtgtaactttcctttttttcatctccttatatttctgtctaagtctgggaggtaagtttgattcaaacaactcaatttttctgtgttgtgctgacatctgtttttcttttttcaggctttgttcagagctctcaagacaaaacatgctacgccgaagtatggtctcatttaccatgcatccctaattggtcaagcagctccaaagcacaagggaaagatttctcgttctcttgcagcaaaaactgctcttgccattcggtatgatgcccttggtgatggtgaagacaactccattggtctagagagtcgagtcaaggtatttactttgtggaaatacatttcctttgtccataatattttctgacccattgagattgacatgtgatccatttggacagcttgagacgcggcttcgtgttctcgagggtaaagaacttggcaggtctgcaggttccactaaaggaaagcccaagatagaagtgtatgaaaaggaccggaagaagggtgctggggctttaatcactcctgctaaggtaggtggtatcacgaattctctcttgaaagtattttcaggaagcttaacgtcttgtgttattcttaaccagtacttgaagaaaaatactagttgtcaaggcagttgttctttgttagatacctaacattttgaccggtcactgtaaagatgtcttgtgtatattactaacattttatacttagcaaacatctgttattggtaccaaggcactctttttacttgtgtaagcatctgttattcagaagtcatctcaacctgatgctttgcacttgatcccagacatacaatcctgcggctgatctggtacttggacaatccactgaagaaactccaaagaagcctgaaggtgcttcgaagaagaggaaacatcaagagacggagcctgcaccagcagagaagaccactaaagaggatggtgaccaagaaggtgaaaagaaaaagaagaaaaagaagtccaaagagagcgaggaatctcctgcggccgatgctgacggtggcaagaaaaagaaaaagacgtccaaggagagcgaggaacctccagtggccactacagaaggtgagaagaaggagaagaagaaaaagaagaaatctgattcacaagatgccgaggatgttgccatggaaaccgaggagtctggcaagaaagagaagaagaaaaagaagaaacaccatagcgatgaatgaaggatacactggagaaggacatgttatcttgagtagcatagggttgaagaatcgctgctctgtaaaatgcaacattccgagtttttccatgccggttagttgtaggataggcatcaagtttggacttgttactcatggatcttgtattcaattgcctactgaattttggaattggagagcatatgatgcttttgctcattctatgtgaactaaagtttcttgtccttttggctggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0350300, RefSeq:Os03g0350300