Os03g0351100

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Revision as of 12:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0351100| Description = Similar to CONSTANS-like protein CO9 (Fragment)| Version = NM_001056649.1 GI:115453026 GeneID:4332842| Length = 2527...")
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Gene Name

Os03g0351100

Description

Similar to CONSTANS-like protein CO9 (Fragment)

Version

NM_001056649.1 GI:115453026 GeneID:4332842

Length

2527 bp

Definition

Oryza sativa Japonica Group Os03g0351100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13205017..13207543

Sequence Coding Region

13205173..13205769,13205891..13206121,13206768..13207057,13207180..13207273

Expression

GEO Profiles:Os03g0351100

Genome Context

<gbrowseImage1> name=NC_008396:13205017..13207543 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13205017..13207543 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtcaagatgaggtggaggtaggtgcggagaagaaggatcaagaactaccggaggtggaggtggtcgaggaggaggaggaggagggatccaagaaggcggcggcgggctgcgactactgcggcgacgcggcggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgtgcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgccgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgacttctccaggcaccgccacggcggggagcgcgacccggcggcgccgctccacgaccgctccacggtgcacccgtacaccgggtgcccctccgcgctcgacctcgccgcgctcctcgggatctcctactccgacaaggcggcggcggcgaccgcggcggcggggggcgacgacggtgggtggtgggccatctgggaggagccccaggtgctcagcctcgaggatctcatcgtcccgaccacctcctgccatggattcgagcctctcctcacgccatcttcccccaagattcagaactcgccggatgggaaggtgaatgaggaggtcatacgacagctaaccgagctcgccaattcagacggcggcggcgcgcagatttgggctcatcgcgaggcggcgcaggccggcgatcatcagttaccttcatggggaacaacaacacaacacaacactggacatggcaatttcggtactgcaaacagcaatgaggttgcaaccatgccgacgcctggttatgagaatggtggatgggataacagcgattaccctgcgctaaatgatccgtgcaaggtcgagttcacatatgagcaacctccagccagctcagctgaagcatgtatttcatcatttgttcagatgtctgaactttgccccagcatgagcaatggtagcagcatggaggaaacccaccagacaaaccctggaaatggcacgccaatgcaagttctacccaaaatgccagaatttgttccttgccccgacaggaacttggtcatttctcgctataaagagaagaggaagacaagaagattcgacaggcaggtccggtatgagtcccgcaaagctcgtgctgatagcaggctgaggattaagggccgttttgctaaagtcaatcagatttga</cdnaseq>

Protein Sequence

<aaseq>MGQDEVEVGAEKKDQELPEVEVVEEEEEEGSKKAAAGCDYCGDA AAVVYCRADAARLCLPCDRHVHGANGVCSRHARAPLCAACAAAGAVFRRGAGGFLCSN CDFSRHRHGGERDPAAPLHDRSTVHPYTGCPSALDLAALLGISYSDKAAAATAAAGGD DGGWWAIWEEPQVLSLEDLIVPTTSCHGFEPLLTPSSPKIQNSPDGKVNEEVIRQLTE LANSDGGGAQIWAHREAAQAGDHQLPSWGTTTQHNTGHGNFGTANSNEVATMPTPGYE NGGWDNSDYPALNDPCKVEFTYEQPPASSAEACISSFVQMSELCPSMSNGSSMEETHQ TNPGNGTPMQVLPKMPEFVPCPDRNLVISRYKEKRKTRRFDRQVRYESRKARADSRLR IKGRFAKVNQI</aaseq>

Gene Sequence

<dnaseqindica>157..753#875..1105#1752..2041#2164..2257#ttcttatcccccaagcaataacgaggcgtcatctctctcgtcatcttctactctccctcctctagtcctcttcttcttctactttgtacgcgccactcactctccgagcttgacggcggcggcggcggcggaggtcgtcgagtggtggtcggggagatgggtcaagatgaggtggaggtaggtgcggagaagaaggatcaagaactaccggaggtggaggtggtcgaggaggaggaggaggagggatccaagaaggcggcggcgggctgcgactactgcggcgacgcggcggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgtgcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgccgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgacttctccaggcaccgccacggcggggagcgcgacccggcggcgccgctccacgaccgctccacggtgcacccgtacaccgggtgcccctccgcgctcgacctcgccgcgctcctcgggatctcctactccgacaaggcggcggcggcgaccgcggcggcggggggcgacgacggtgggtggtgggccatctgggaggagccccaggtgctcagcctcgaggatctcatcgtcccgaccacctcctgccatggattcgagcctctcctcacgccatcttcccccaaggttcgcttttacagccttctactgttcactgtccgaaaaaaaaaaatcccccccttttctgaatcaacttctatttaatttactcccatttatccggcttaattcttgtctgctgcaaaagattcagaactcgccggatgggaaggtgaatgaggaggtcatacgacagctaaccgagctcgccaattcagacggcggcggcgcgcagatttgggctcatcgcgaggcggcgcaggccggcgatcatcagttaccttcatggggaacaacaacacaacacaacactggacatggcaatttcggtactgcaaacagcaatgaggttgcaaccatgccgacgcctggttatgaggtttgatctacaatcttcagcatatctgactaatttgcagtgctgtttaccctatggatgtacttttgtcactgcaattgttagtcaagcgataaatggtactagattggtagtgtccgcagaatcttcgtctgaacggtagaaactatacagattctgtatcatatgcggtgaagatattcctaggcatgctttgctgtacctatgttgatggggaatttattctgtagtgtcaactcaagcgctagcaactcaagatacatctgagtcagaataaagtcattctagtgaagaacccctaaattctctttctctttttcagagagaagaagccccaaatttgatatgattctgttcttttcctatctattgtcatattcgtgattttgtgtaagattcttatttggtttacacctactgacacatacattaattttttaaacctggacaaggataccattctacccattgattatttattgacagtcctgttcagatagggggaattgtatccacactgaaattggccatgaaaaacgcagagtaggcctagttgataaagagctaagattttgattgtcagttcttttgcgcaaaatagatgcttacttggctatctattaatataactttatctatatggcagaatggtggatgggataacagcgattaccctgcgctaaatgatccgtgcaaggtcgagttcacatatgagcaacctccagccagctcagctgaagcatgtatttcatcatttgttcagatgtctgaactttgccccagcatgagcaatggtagcagcatggaggaaacccaccagacaaaccctggaaatggcacgccaatgcaagttctacccaaaatgccagaatttgttccttgccccgacaggaacttggtcatttctcgctataaagagaagaggaagacaagaaggtgacataagcttatggcaagcatgatgtttttatttcctcttgaagcttctcttggactcttacccaggatttttcgatttgaaacataactgtgtgacaatgaaattctaattattgcagattcgacaggcaggtccggtatgagtcccgcaaagctcgtgctgatagcaggctgaggattaagggccgttttgctaaagtcaatcagatttgagccttcatttctgtaatatattttgcatcttggacatgagtaatactaattaggaccaagcagatatagtacaagaaaaaatatcagcattttgtatgtaactatgtacccacccagtggctacgccacgctgaggagaatttagtttcatcgaatctctgtatatagtgttgcatcgaactcagtgatactatttacatgcaaaggatattgtcattatggctgtttccccatggttttactgcaaactgtctgctgtgttactactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0351100, RefSeq:Os03g0351100